Phasianus colchicus (Ring-necked pheasant): 116231140
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Entry
116231140 CDS
T07365
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03020
RNA polymerase
pcoc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116231140 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
116231140 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoc03021
]
116231140 (POLR2B)
03400 DNA repair and recombination proteins [BR:
pcoc03400
]
116231140 (POLR2B)
Enzymes [BR:
pcoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116231140 (POLR2B)
Transcription machinery [BR:
pcoc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
116231140 (POLR2B)
DNA repair and recombination proteins [BR:
pcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
116231140 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
116231140
NCBI-ProteinID:
XP_031452587
Ensembl:
ENSPCLG00000010470
UniProt:
A0A669PVI5
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcagtacgatgaagacgacgacgagatcacccccgac
ctgtggcaggaggcgtgctggattgtcattagctcctattttgatgaaaaaggtttagtc
aggcaacagttggattcttttgatgagtttattcagatgtctgtgcagagaattgttgaa
gatgctccaccgattgatttacaagcagaagcccagcatgccacaggagaagtggaagaa
ccgccccggtatctcctgaagtttgaacaaatctatctctccaaacctacgcactgggaa
agagatggagcaccgtcacctatgatgcccaatgaagccaggctgagaaaccttacgtat
tcagcccccttatacgtggatataactaaaacagttattaaagaaggggaggatcagtta
cagacacaacatcagaaaacttttataggcaaaattcctattatgttacgatcaacgtac
tgcttgttaaatggcttaactgaccgtgatctttgtgaactgaatgaatgccctctggat
ccgggtggctattttatcattaatggatcagaaaaggttctgattgctcaagaaaaaatg
gctacaaacacagtatatgtgtttgcaaaaaaagattccaaatatgcctacacgggagag
tgtagatcttgtctggaaaattcctctcgaccaacaagtactatatgggttagcatgcta
gccagaggtgggcagggtgcaaagaagagtgctattggtcagcgcattgtagcaacgttg
ccatatatcaaacaagaagtgccaatcataattgtctttcgtgcactagggtttgtgtct
gacagggacattttagagcacatcatttatgattttgaagatccagaaatgatggaaatg
gttaaaccttctctggatgaagcctttgtcattcaggagcaaaacgttgctctgaacttc
attggatcaagaggtgcaaagccaggtgtcaccaaagaaaagagaatcaagtacgctaag
gaagtcctgcagaaagaaatgcttccacacgttggtgtcagtgacttctgtgaaaccaag
aaggcctattttctagggtatatggttcatagattgttgttggctgcactgggcagaagg
gagcttgatgacagagatcattatggcaacaaaaggctggatcttgctggaccactactg
gcttttctgttcagaggaatgtttaagaatttgctgaaggaagtgagaatatatgcacaa
aagtttattgacagagggaaggatttcaacttggaactggcaattaaaacgagaattatt
tctgatggtttgaaatattcattggccactggaaactggggtgatcagaagaaagctcat
caggccagagcaggtgtatcacaggtgttaaaccgtctgacttttgcatcaacgctttcc
catctgagacgcctgaattctccaattggtagagatggaaagctagcaaagcccaggcag
ctgcacaatacgctgtggggaatggtttgcccagctgagactccagagggtcatgcagta
ggacttgtgaagaacttagccctgatggcttacatttctgtggggtctcagccatcccca
attttggaattcttggaagagtggagtatggaaaacctggaagaaatatctccagcagca
atcgcagatgctaccaagatttttgttaatggctgctgggtaggaatacacaaagatcca
gagcagcttatgaataccctaaggaagctccgtcgtcagatggatataattgtgtcagag
gtctcaatgataagggatattcgtgagcgagaaatccgcatctatactgatgcaggcaga
atttgccgacctcttctaattgtggaaaagcagaagttgctgttgaagaaaaggcatatt
gaccaactgaaggaacgagagtataacaattacagttggcaggaccttgtggccagtggt
gtagtagagtacatcgatacactggaagaagagactgtgatgctggccatgactccagat
gacttgcaggagaagggtgttgcatattgttcaacatatacccactgtgagattcacccg
tccatgatcctgggagtgtgtgcatctattattcctttccccgatcacaaccagtctcct
aggaacacgtaccagtctgctatgggtaaacaggcaatgggggtctacattacaaacttc
catgttcgtatggacacactggcccatgttctgtactatcctcagaagccccttgtaaca
acacgctccatggagtacttgcgatttagagagttacctgcaggtatcaattcgatcgta
gccattgcatcatatacaggctataaccaggaagattctgtcatcatgaaccgttctgct
gtcgacagaggctttttcagatctgtgttctatcgctcctacaaagagcaagagtccaaa
aaaggatatgaccaagaggaagtttttgagaagcctacccgtgagacttgccaaggtatg
agacatgcaatctatgacaaacttgatgatgatggtttgattgcacctggagtacgtgtg
tctggggacgatgtcatcattggcaaaacagtaactctgccagaaaacgaagatgaactg
gaaagcactaacaggcgcttcacaaagagagactgtagcacttttctgcgaactagtgag
actggtattgtagatcaggtcatggtaactcttaaccaggaaggatacaaattctgcaag
atcagggtacggtctgtaagaatccctcaaataggagataaatttgccagcaggcatggt
cagaaaggaacctgtggtatccagtacaggcaagaggatatgcccttcacctgtgaaggc
atcacaccagatatcatcatcaacccccatgccatcccttcccgcatgaccattggccac
ttgattgaatgtcttcaggggaaggtgtcggcaaacaagggagaaattggtgatgctacg
ccatttaatgatgctgtcaatgtgcagaagatttccaatcttctatcagattatggttat
catttaagaggaaatgaggtcctctacaatggcttcactgggcgaaaaatcacatcacag
atcttcattggtcctacatattatcagcggctgaagcacatggtagatgacaaaatccat
tctcgtgcaagagggcccatccagatacttaacagacagcccatggaaggaagatctcgt
gatggtggccttcgttttggagaaatggaacgagactgtcagattgcccatggagcagcc
cagtttttgagagagagattgtttgaggcatcagacccataccaagtccacgtatgtaac
ctctgtggaatcatggcaattgcaaacacaaggactcacacatacgaatgccgaggatgc
cgaaataaaacacagatatctttggttcgaatgccttatgcctgcaaactcctcttccaa
gaactgatgtctatgagcattgcacctcggatgatgagtgtttag
DBGET
integrated database retrieval system
