Phasianus colchicus (Ring-necked pheasant): 116231601
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Entry
116231601 CDS
T07365
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcoc03016
]
116231601 (TRUB1)
Enzymes [BR:
pcoc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
116231601 (TRUB1)
Transfer RNA biogenesis [BR:
pcoc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
116231601 (TRUB1)
Prokaryotic type
116231601 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
Pus10_C
Motif
Other DBs
NCBI-GeneID:
116231601
NCBI-ProteinID:
XP_031453284
LinkDB
All DBs
Position
Unknown
AA seq
283 aa
AA seq
DB search
MATGELGSRSAEKLFSLSGLFAVYKPKGRTSAAVLNLLKERLLAEAGVQVKDNKRKRQAL
KIGHGGTLDSAATGVLVVGIGKGTKLLKTILAGSKKYTAIGLLGRATDTLDATGKVTEEK
PYDQVTKSDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVRVYS
LSLQQFQPPLFTLDVECGGGFYVRSLVSDIGKELSTCASIQELTRTKHGPFTLEEHALHE
DRWTIDEIARSLEHCMSLFPGEQSHKKFKTELPAETAVSREDK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggccaccggggagctggggagcaggtcggctgagaagctcttctccctcagcgggctg
ttcgccgtctacaagcccaaagggcgcacctcggctgccgtgctcaacctgctgaaggag
aggctgctggcagaagccggcgtgcaagtaaaagataacaaaagaaaaaggcaagccttg
aaaattggacatggtggaactttggacagtgcggcaacaggagttctggtggttggtatt
ggaaagggaacaaaattgctgaaaactatattggcaggttccaagaagtacactgccatt
ggactactgggcagagctactgatacattagatgccacaggaaaagtaactgaagaaaag
ccttatgaccaagtaacaaaatcagatcttgagaatgtgctgcagaagttcacaggggac
ataatgcaggttcctccactctattctgctttgaagaaggatggagaaaggctatcaact
ctaatgaagagaggagaagcagtagaagcaaagcctgctcggccagtaagagtgtacagc
ctctctctccaacagttccagccaccactgttcacactggatgtcgaatgtggcggtggc
ttttatgtcaggagcctggtcagtgacattggcaaagaactttcaacctgtgccagcata
caggagctgacccgaaccaaacacggaccgtttacgctggaggagcacgcacttcatgaa
gacagatggacaattgatgaaattgcacgatccttagagcattgcatgtctcttttccca
ggagagcaatctcataaaaaatttaagacagagcttcctgcagaaactgctgtgagccgt
gaagataagtga
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