Phasianus colchicus (Ring-necked pheasant): 116231651
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Entry
116231651 CDS
T07365
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcoc03009
]
116231651 (PDCD11)
Ribosome biogenesis [BR:
pcoc03009
]
Eukaryotic type
90S particles
Other 90S particles
116231651 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
OB_RRP5_4th
Spt6_S1
Suf
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_C
OB_RRP5
TPR_19
TPR_CcmH_CycH
ARM_TT21
TPR_15
ARM_TT21_5th
TPR_12
TPR_16
Motif
Other DBs
NCBI-GeneID:
116231651
NCBI-ProteinID:
XP_031453395
Ensembl:
ENSPCLG00000009285
LinkDB
All DBs
Position
Unknown
AA seq
1837 aa
AA seq
DB search
MASMEENFPRGGIQKKPTETTGKKAKPKFEQDNLFDIHHEEQTQKRKRSEGDHRKQKKFK
ADKKAPAKDVAISVEPLTIQELCEGMLLLGCIKEVTVFELVISLPNGLTGFVPVTQISDA
YSELLSKQVTQGELLEDLNSLSDLYSPGMLVRCIVTSVEKSADGRRSIKLSINPKNVNKG
LNASALTSGMLLSGFVSSVEDHGYLIDIGVRGTHAFLPYQKAQNYIKAVKRGSDLKIGQS
LTCVIEEVKNEGRVVRLSADRSEVAASIATEQQNWTLSNLLPGLVVKAQVQKVAPLGIRL
TFLSSFTGIVDFMHVDPEKFTNYSPNQVVKACILSTHPTSKVVHLTLRQAFLHPGGSPNQ
LSNDRIGAVVGESTVKAFYKQFGAVFELDDGMLAFARLKHLSKTRKSFKPAAFKAGCKHK
CRIIDYSLMDEMCIVSLKHQIIEARFLRYQDIHTGNVMQGKVLSLKPIGMQVKVTDGIKG
LVPSMHLADVILKQPEKKYNVGDEVRCRVLECNPAEKKLFLTLKKTLVQSKLPILSSYED
AEPGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELSSEPISCPDKVFHDGQVVKVMVLK
CEPQQERLLLSFRLSSRPVPEGRSECTPKKKQQVKYQIGEMVDVKVLKKNENGLEVSILE
DGDDVIAWLPTVHFSDFVANSKLLWHCLQEGDVLPRVMCLSDKEDRIILCRKSAVISAVQ
EEQVVRSFSEIQPGVLLTGFVRKVMPFGVFVEFPFGVTGLAPKVSMSDKFVTDTKDHFVV
GQTVIAKVMSIDEEKQRVLLNLKVSECSSGDSAAESFSLLNQYFKEMEEIKNLLRKREES
GLAQCLCELVPGKELQLVVQDVMEDGSALFSGSCVGGWTVTATRYHLGGKKVVPGEKAKG
LVLHADAITSKVYVSLREELLKKRAKQRLTKNSQHSAIVQHIAEDFAIVSLLDSGRLAAV
PIACHFNDTFRFDSEKMKVGQRIYATLKMVKANDLGVVLAVQDPTKKNVFIRDRKESETA
FEETLATAVKHSLSLGDIVTGTVKSVKPTHVTVAIDDKLTGSIHASQILDEVPIHSFPTY
TLKAGQKVTARVIGGRDVNTHRYLPITHPHFTRSIPELSIRPSEVEGKFEAIRDDTCEKL
GPYNVGQTVTCFVRKYNILKNWLEVEVTPDIRGRVPRLLLSLNTKVLKHPEKNFKNGQAL
SATVTGTDATETNLFLSLTGIQSLEPGTITVGMVAKMIPHIGLTIALPGGKTGKVSIFHL
SDKYTENPLSDFKIGKVVRCYILSNENGKIQLSLRQSRLNPRNSSKVEDAEITSIKDVKK
GQLLRGYVKSVTPSGVFFGLSASLLGRILFQNVSPYFVQKHSLYEKYLPEGKLLTAKVLD
VNKKENHVELSLLPEDTEMPSVLPESLGLPRCGAEEEKREEDNKEKKEKVKMKRKQRRVN
SESEQEAKPKKRKLSPADENDSGIEVYYREEEDGDQEEEAAEKKSKIKKCGEVPRLQVST
GFTWDEDINAVQVPVLNQKEESSESEEEEEDLQSKKKQTKKEKELEKQKKEKELCKLEAA
LMDPSRQPQSADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTICFREE
QEKLNVWVALLNLENMYGTEETLMKVFERAVQYNEPLKVFQHLCDIYASSEKYKQAEELY
HTMLRRFRQEKSVWLKYASFLLKQGQTEATHRLLERALKALPTKEHVDVISRFAQLEFRF
GDPEHAKALFESTLNSYPKRTDIWSIYMDIMIKQGSQKEVRDIFEKVIHLNLAPKKMKFF
FKRYLDYEKKYGTAETVMAVKTAALEYVEAKSSLADT
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atggcatccatggaagaaaactttcctcgagggggaatccagaagaagcccacagagaca
acaggaaaaaaagcaaaaccaaagtttgagcaggataacttgtttgatattcaccatgaa
gaacaaacacagaaaagaaaaaggagtgaaggggatcataggaagcagaaaaagttcaag
gcagacaaaaaggctcctgctaaagacgttgctattagtgttgaaccactcacaattcag
gagctctgtgaggggatgctgctccttggttgtataaaagaggtcactgtctttgagctt
gtcatcagcttgcccaatggccttacaggatttgtgccagtcacgcagatcagcgatgcc
tatagcgaattgttgagcaagcaagtgacccaaggggagctgctggaggatttgaattct
ctctcagacctgtattctccagggatgttggtcagatgcattgtgaccagtgttgagaaa
agtgccgatggacgtcggagtatcaagttgtccatcaaccctaaaaatgtcaacaaaggt
ctgaatgcatcagcactaacatcaggcatgctgctttctggatttgtgtctagtgtagaa
gaccatggctacctcattgatattggagtcagggggactcatgctttccttccttatcag
aaagcccaaaattacatcaaagcagtcaagagagggtctgacttgaaaatagggcagagc
ctgacctgtgtcattgaggaagtaaagaatgagggaagagttgtccgtttgtctgccgat
cgatcagaagttgctgcatccattgcaacagagcagcagaactggacactctctaatcta
ctgccagggctggtagtaaaagctcaagtgcagaaggtggctccactgggtatcagactc
acctttctgtcttctttcactggtattgtggatttcatgcatgtggacccagagaaattc
acaaattattctccaaatcaagtggtgaaggcttgcatcctctctacccaccccacctcc
aaggtggtgcatcttactctgcggcaggccttcctccaccctggaggatccccaaaccag
ctctccaatgatcgcataggggcggtagtgggagagtctacagtgaaggctttctacaag
cagtttggtgctgtctttgagctcgatgatggcatgcttgcatttgcacggttgaaacat
ctatcaaaaaccagaaaatcttttaaacctgcagcattcaaagctggatgtaagcataag
tgtcggatcattgactacagcctgatggatgagatgtgcatagtatctctgaagcaccaa
attattgaagctcgtttcctgcgataccaagatattcacacggggaatgtcatgcagggc
aaagtattgtctctgaaacccattgggatgcaggtgaaagttactgatggaattaaaggg
cttgtgccatccatgcatcttgccgatgtgatcctgaagcagcctgagaagaagtacaac
gtaggagatgaagtcaggtgtcgggtgttagagtgcaatcctgcagaaaagaagctattc
cttacgttaaagaaaactcttgtgcaatcaaagcttccaatcctttctagttatgaagat
gcagaaccaggtctgatcacacatggctttgtggtgtgtgcaagggaatttggctgcatt
gtgaagttctacaatgatgtcaaaggtctggtacccaagaatgagctgagctcagagccc
atatcttgtccagataaagtcttccatgatggccaggttgttaaagtaatggtcttaaaa
tgtgagccccagcaggaaaggctcttgctgtccttcaggttatcaagcaggcctgttcct
gaaggcagaagtgaatgtactccaaagaagaaacagcaagtgaaatatcaaataggagag
atggttgatgtgaaagtcttgaagaagaatgaaaatgggctcgaggtttctatcttagaa
gatggagacgatgtgatagcctggcttcctacagtgcacttctctgactttgttgctaac
tctaagctcctgtggcattgccttcaagagggagatgtcttgcccagagttatgtgcctg
agtgacaaggaggaccgtattatcttgtgcaggaagtctgcagtgatttctgctgtacag
gaagagcaagttgtgagaagtttctctgaaatccagcctggggtgctgctgactggtttt
gtgaggaaggttatgccctttggagtgtttgtggagttcccttttggtgtgacaggactg
gcacctaaagtgagcatgagtgacaagtttgtgacagacaccaaggaccactttgtggtg
ggacagactgtaattgcaaaggtgatgagcattgatgaggagaagcagcgtgtgctcctc
aatctgaaggtgtcggagtgcagctctggtgattcagctgcagagagcttttcactgctg
aatcaatatttcaaggagatggaggaaatcaagaacttgttgaggaaaagagaggagtct
ggcttggcccagtgcctttgtgagctggtgcctgggaaggagctgcagctggttgtgcag
gatgtgatggaggacggctcagcacttttcagtggcagctgtgtcggaggctggactgta
acagctactcgctaccacttgggaggcaaaaaagttgttcctggtgagaaagcaaaggga
ctggttcttcatgcggatgccatcacatccaaggtgtatgtttctcttcgagaagaactc
ttaaaaaaaagagccaagcaacggctcacaaagaactcccagcactctgccatcgtgcag
cacatagcagaagattttgccatcgtgtctctgttggactcaggccggctggcagctgtc
cccatagcctgtcacttcaacgacaccttccgctttgactcagaaaaaatgaaggtggga
cagagaatctatgcaaccttaaaaatggtgaaggcaaatgatcttggagtcgtgttagca
gtacaagacccaacgaagaagaatgtttttataagggaccggaaagaatctgagacagca
tttgaggagacacttgctactgctgtgaaacactctctttccctgggtgatattgttact
ggtactgttaaatctgtcaaaccaacccacgtcacagttgctattgatgacaaattgacg
ggttcaatccatgcatcccagattctggatgaagtgcccatacactcttttccaacatac
actctgaaagctggacagaaggtgactgcccgggtcattggaggcagagatgtgaacact
cacaggtacctgcccatcacccatccacacttcacacggtctattccagagctcagcatt
cgaccaagtgaagtagaagggaaatttgaagcaataagagatgacacctgtgagaaactt
ggaccctacaatgttggacagacagtcacctgttttgtgaggaagtataacatcctgaaa
aattggctggaggtagaagtcacccctgatattcgaggaagagttcctcgtctgctgctg
tctctgaacaccaaggtcttaaaacatccagaaaagaacttcaaaaatggccaagcgtta
tctgctacagtgactggaacagatgccaccgaaacaaacctcttcttgtcactcacagga
attcagtcactggaaccaggtaccatcaccgtaggcatggtagcaaaaatgattcctcac
attggtttgaccattgctctgccaggtgggaagactggcaaagtcagtatctttcaccta
agcgataagtacacagagaatcctctgagtgacttcaaaattggcaaggttgtcagatgt
tacatcctctccaatgagaatggcaaaatccagttatctcttcggcagtccagattaaac
ccaaggaacagcagcaaagtggaggatgctgaaataacaagtattaaggatgttaaaaaa
ggccagctattaagaggctatgtcaaatcagttactccgtcaggtgtattctttggcttg
tctgcttctcttctgggccgaatcctgttccagaacgtttccccttactttgtacagaaa
cattccttatatgagaaatacctgccagagggaaagctgctcactgccaaggtccttgat
gtaaataaaaaagaaaatcatgttgagctctctctcctgcctgaggacactgagatgcca
agcgtcttgcctgaatccctaggcttaccacgctgtggtgcagaggaagagaaaagagaa
gaagataacaaggagaagaaggaaaaggttaagatgaagagaaaacagagaagagtgaac
tctgagagtgagcaggaagcaaagccaaaaaaaaggaagctttctccagcagatgaaaat
gacagtggaattgaagtgtattaccgggaagaagaggatggtgaccaggaggaagaggca
gctgagaagaaatctaagataaagaaatgtggtgaggttccgaggctgcaagtttccaca
ggcttcacctgggatgaggacataaatgcagtgcaagtgcctgtactgaatcagaaggaa
gagagctcggagagtgaggaggaggaggaggatctgcagtctaagaagaaacaaacaaag
aaggagaaggagctggagaagcagaagaaggagaaagagctgtgcaaattggaggcagcc
ctgatggaccccagtcgtcagccccaatcagcagatgattttgaccgtctggtgctgagt
agtcccaacagctccatcctctggctgcagtatatggctttccacctccaggctactgag
attgagaaggccagagctgtggcagagagagcacttaaaacaatctgtttcagggaagaa
caagagaagctgaatgtctgggttgctcttctaaacttggagaacatgtatggcactgag
gaaacactgatgaaggtctttgagagagctgttcagtacaatgaacctctgaaagtcttc
cagcatctgtgtgatatctatgccagttctgagaagtacaagcaagcagaagaattgtac
cacacaatgctgaggcgtttccgtcaagaaaaatcagtgtggctgaagtatgcctctttc
ctcctgaagcaaggccagactgaggctacacacaggcttttggagcgtgctctcaaggct
ctgcccaccaaagaacatgtggatgtcatttcaaggtttgcacagttggagttccgtttt
ggtgacccagaacatgccaaggccctttttgagagcaccctcaacagctacccaaagcga
acagatatctggtccatctacatggacatcatgatcaaacagggcagccagaaggaagta
cgggacatctttgagaaggtcatacacctgaacttagcaccgaagaagatgaaattcttc
tttaagcgctacctggattatgaaaagaaatatggtacagcagaaactgtcatggctgtt
aagacagcagcactggagtatgtagaggccaagagttccctcgctgacacctaa
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integrated database retrieval system
