Phasianus colchicus (Ring-necked pheasant): 116231652
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Entry
116231652 CDS
T07365
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116231652 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoc03021
]
116231652 (TAF5)
03036 Chromosome and associated proteins [BR:
pcoc03036
]
116231652 (TAF5)
Transcription machinery [BR:
pcoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116231652 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
116231652 (TAF5)
Chromosome and associated proteins [BR:
pcoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116231652 (TAF5)
STAGA complex
116231652 (TAF5)
TFTC complex
116231652 (TAF5)
SAGA complex
116231652 (TAF5)
SLIK complex
116231652 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
Tricorn_2nd
PEP5_VPS11_N
CDK5RAP3
Beta-prop_ACSF4
RAB3GAP2_N
eIF2A
VPS8_N
VID27
Motif
Other DBs
NCBI-GeneID:
116231652
NCBI-ProteinID:
XP_031453397
Ensembl:
ENSPCLG00000009292
UniProt:
A0A669PSQ0
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MAAVAEEPAEVVAVKPDPEAETPPQPPAAPPATAAPPAPSAAAAEGEAAGSAGAASSGKP
SAPGPAASPAALDRQTLVAVLQFLRRSNLRESEEILRREARLLGEDLGTAALSPAGAGLP
GAPGSEGDASSSEALLSRVTAAAAIAIGGSVAPVASSSPGVAAAAAVPPGKVGGGVVVED
QPDVSAVLSAYNQQGDPTLYEEYYSGLKNFIECSLDCHRAELSQLFYPLFVHMYLELVYN
QHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSY
QLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFF
GLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKRDSVGSKSKKQDPNAPPQNRIPLPELKD
SDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTV
RVWSVTPKKLRSVKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPD
RNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWAT
DHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHS
LAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNT
VRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAA
GAYSSQ
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtagctgaggagccggcggaggttgtcgcggtgaagccggacccagaggcg
gagacgccgccacagccccccgccgctccccccgccaccgccgctccccccgctccgtcg
gccgcggctgcggagggggaggcggcggggagcgccggggccgcgtcgtccggtaagccc
tcggcaccgggcccggccgcctctccggcggcgctggaccggcagacgctggtggccgtg
ctgcagttcctgcggcgcagcaacctccgcgagtctgaggagatcctgcgtcgcgaagcc
cgcctgctcggcgaggacctcggaaccgccgccctcagccccgccggtgccgggctcccg
ggagccccggggagcgaaggggatgccagcagcagcgaggcgctgctcagccgggtcacc
gccgccgccgccatcgcgataggaggcagcgtcgcccccgtcgcctcttccagcccgggg
gtggcggcagcggccgcagtgccaccgggtaaagttggaggaggagttgttgtggaggat
cagccagatgtgagtgcagtgttgtctgcctacaatcagcagggggacccaacgctgtac
gaggagtactacagtggtttaaaaaacttcattgagtgttccctggactgtcatcgagcc
gaactgtctcagctgttttatcctctctttgtgcacatgtacttggagttggtctacaat
cagcatgagagtgaagctaagtctttttttgaaagatttcatggagatcaggaatgttat
taccaagatgacctccgtgtattatctagcttaaccaaaaaagaacatatgaaaggcaat
gagaccatgctggatttccgaacaagcaagtttgttctgcgtatttcccgtgactcttac
caactcttgaagaggcatcttcaggaaaagcagaacaaccagatctggaacattgttcag
gaacatctctacattgatatttttgatggaatgcctcgtagtaaacaacaaatagatgct
atggttggaagcttggctggggaggcaaaacgagaggcaaataaagcaaaggttttcttt
ggcttattgaaagaaccagagtttgatgtgcctttggatgatgaagatgaagaaggagaa
aacgaggaaggaaaaccaaagaagaaaaaacctaaaagagacagcgtagggtcaaaaagt
aaaaaacaagaccctaatgctcctcctcaaaacagaattcctcttcctgaactgaaagat
tcagataaactggataaagtgatgaacatgaaggaagctgccagacgtgtgcgtcttggg
ccagagtgcctgccttccatctgtttctacacgttccttaacgcttatcagggtttaact
gcagtggatattacagatgactctagcatgattgtaggaggctttgctgactctacagtc
agagtgtggtccgtgactccgaaaaagctacgtagtgtaaaagcagcagcagacctcagt
ctgattgacaaagaatcggatgatgtcttggagaggatcatggatgagaaaactgcaagt
gagttgaagattttatatggtcacagtggacctgtctatggcaccagcttcagtcctgat
aggaactacctgttgtcctgttctgaggatggtactgtcagattgtggagcctccaaaca
ttcacatgtctggtgggatataaaggacacaactatccagtatgggatacacagttctct
ccttacgggtattactttgtgtcagggggacatgacagagtggctagactgtgggcaaca
gatcattaccagccattacggatatttgctggccaccttgcagatgtgacatgtactcga
tttcaccctaactccaactatattgccactggctcagcagacaggactgtacggctctgg
gatgttttaaatgggaattgtgtaagaatattcactggacataagggtccgattcattca
ttggcattttcacctaatggacgattcctagctacaggagcaacagatggcagagttctg
ctgtgggatattggacatggcttgatggttggagaactgaaagggcacactgacactatc
tatgcgctccgattcagtagagatggggagattttagcatcaggttcaatggataacaca
gttcggctgtgggatgcagtgaaagcatttgaagatttagaaacagatgactttactaca
gccactggacacataaacttgcctgaaaactcacaggacttgttactaggtacatacatg
accaaatcaactccagttgtacaccttcattttacacgcaggaacttgctgctagctgca
ggagcctacagttcacagtag
DBGET
integrated database retrieval system
