Phasianus colchicus (Ring-necked pheasant): 116231868
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Entry
116231868 CDS
T07365
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pcoc03037
]
116231868 (CCDC88A)
Cilium and associated proteins [BR:
pcoc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116231868 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
HOOK
GAS
APG6_N
Motif
Other DBs
NCBI-GeneID:
116231868
NCBI-ProteinID:
XP_031453723
Ensembl:
ENSPCLG00000012902
LinkDB
All DBs
Position
Unknown
AA seq
2100 aa
AA seq
DB search
MDNEVFTPLLKKFTRSPLVTWVRTFGPLAEENGTSLEEYMTLVDGVFLNEVMLQINPKST
NRNVNKRVNNDESLRIQNLCILVKKIKYFYQECLQQLILMALPNVLIIGRNPLSEPGTNE
INKILLLLLGCAVQCQKKEEFIERIQHLDFDTKAAVAAHIQEVTQNQENVFDLQWMDVIV
FTQDSVEPLLKNMTLQLRRLVDERDEHLETIIELSEDRDSLHLLPQASAAQSPCGSPGLK
HTESKQHLSVELADAKAKIRRLRQEIEEKNEQFLDYKQELERVESELRKLQQENKSLLSD
ARSARIYRDELDILREKAIRVDKLESEVSRYKERLHDMEFYKARMEELMEDNQVMLETKR
MFEDQVKTLQSRSDKLHVVEKENLQLKAKLHEMELERDMDRKKIEELMEDNMALEIAQKQ
SMDESLHLGWELEQINRFTDHSEVSYKSLGLEVTELTSSRLLKLEKENQSLLKTVEELRS
TMDDSVGGNSSRILKMEKENQRLNKKIEVLEKEIIQEKQSLQNNQNLTKDLMKEKVQLEK
KFETLRENLERQVKLLEQENERSNQTIAALRQRAQISAEAQMKETENENKILHESIKETS
SKLNKLEFEIKQVKKEMEHYKEKAERAEELENELHRLEKENELLQKKIANLNITCEKIEA
LEKENSDLDIENRKLKKTLDSLKNLSFQLESLEKENSQLDEENLELRRRIESSKCTSIKM
AQLQLENKELESEKEQLKKSLELMKASFKKSERLEVSYQGLDTENQRLQKALENSNKKIQ
QLESELQDLESENQTLQKNLEELVISSKRLEQLEKENKLLEQETSQLEKDKKQLEKENKR
LRQQAEIKDSTLEENNVKINHLEKENKSLFKQIAVYKESCVRLKELEMENKELVKRASID
KKTLVTLREDLVNEKLKTQQMNNDLEKLSHELEKIGLNKERLLCDEQSSDDRYKLLESKL
ESTLKKSLEIKEEKIAALEARLEESTNLNQQLRQELKTVKKNYEALKQRQEEERMVQNPP
PRKGEENQSVNKWEKENQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNN
NLQAQILALQRQTVSLQEQNTTLQTQNAKLQLEVIRECLTQHEKGSSSSSFRIQLFFSSV
GEQVENSTLNSQSTSLMNQNAQLLIQQSALENEKEGVLKELEDLKSLYDSLLKDHEKLEH
LHERQASEYESLIAKHGSLKSAHKNLEVEHKDLEDRYNQLLKQKVQLEELEKVLKTEQEK
MLQQNEKHETVAAEYKKLRDENDRLAHTHDQLLKENEVLQTDHKNLKTLLNNSKLGQTQL
EAEFSKLREEYQLLDIKCTKISNQCELLSQLKGNMEEENRHLLDQIQTLMLQNRTLLEQN
MESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQYKFYEPSPPRRRGNWITLKMRKLMK
SKKDVNRERQKSATLTPTRSESSEGFLQLPHQDSQDSSSVGSNSLEDGQVLGTKKSTMVA
LKRLPFLRNRPKEKDKMKAFYRRSMSMNDLVQSMVLAGGQWTGSSEHLEGPDDISAGKRR
KELGAMAFSTTAINFATVNSSTGFRSKQLLNNKDAVSYEDVSPQGISDDSSTGSRVHGVQ
DINCADALAPPVRGISTMCKVPCQICSSRPASLDSGRTSTSNSNNNASLHEVKAGMVNNQ
SRPQSHSSGEFSMLHEHDAWSSSSSSPIQYLKGHTRSSPVLQQKTPETLDRCGKQIKTDS
PGSEVVTLQQFLEESNKSTSSEMKSGSEENLLDEVMRSLSESSELTGKEKLRKAAAGCGI
VRSLSVKNPVDFSDGRSIKPEQLVRPTLRKTEDAYFTSSPIKFTSGTQGKAKSVKEKMQT
SASQRQSRDCNPYATLPRASSVISTAEGTTRRTSIHDFLSKDVRQPVSSDPATSTADRSV
PATSSEYSAHQLSSPFFHCVAYRVDCVPQSNATNTVKPRNLGCNSDVPKTSRMERSNFCE
KTFLSTNMFNDKVSLSGSENTGSFTVVQPFLSLNTELVSNISGLPPRSASKADQANLSMF
VSVPKNQEQPFTNQKSANRDLQSALSSEFVPTSCVNTSEAESLLLVSEDNKTVWYEYGCV
NT seq
6303 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgaagtcttcaccccccttttgaagaagttcacgcgcagccctctcgtcaca
tgggttcggacgttcggacccttagcggaggagaatgggaccagcctggaggaatacatg
acgctggtggacggcgtgtttctcaacgaagtcatgctgcagattaatccgaagtccacg
aatcggaatgtaaacaagagagtcaacaatgatgaatcactaaggattcagaacttgtgt
attttggtgaagaaaataaaatatttctaccaggaatgtttgcagcagctgatcttgatg
gctttgccgaatgtgttaataatcggcagaaatcctctttctgagccaggtactaatgaa
ataaataaaatactcctgcttctgcttggttgtgctgttcagtgtcagaaaaaggaagaa
ttcattgaaagaatccaacatctggattttgacacaaaagcagctgttgcagcccatatt
caagaggtaactcagaaccaggagaatgtgtttgatctgcagtggatggatgtcattgta
tttacacaagactctgttgaacctcttttgaaaaatatgacattacagttgagaagactt
gtagatgaaagagatgagcacttagagactatcatagaactctcagaagatcgggactct
ctccatttgctacctcaggcatcagcagcacaatcaccttgtggatctcctggcttgaaa
cacactgaaagcaaacagcacctgtcagttgagctagcagatgccaaagcaaagataaga
aggcttaggcaagagattgaggaaaagaatgagcaatttcttgactataaacaagaactt
gaacgggtggaaagtgaactaaggaagcttcagcaagagaataagagtttactctcagat
gcccgttctgccaggatttatagagatgaattagatattcttcgtgagaaggcaattcga
gttgacaagctcgaaagtgaagtcagccggtacaaagagagactgcatgatatggaattc
tacaaagctagaatggaggagttaatggaagacaatcaagtgatgctagaaacaaagagg
atgtttgaggatcaagtaaagacactgcaatcccgttctgataaattacatgtggtagaa
aaagagaatctacagctgaaagctaaactacatgaaatggagttggagcgtgatatggac
agaaagaagattgaggaacttatggaggataacatggctctggaaatagctcagaaacaa
agtatggatgaatcactacatctcggctgggaacttgagcagataaacaggtttactgat
cattctgaagtgtcatataaatcacttggtcttgaagtaactgaactgacatcaagcaga
ctactgaaattggaaaaggaaaaccaaagtttactgaaaacagtggaagaactacgaagc
acaatggatgattctgtaggaggcaatagttcaaggattctgaaaatggaaaaagaaaac
caaagactaaacaaaaagattgaggtactggaaaaggaaattatccaagaaaaacagagt
cttcagaacaatcaaaatttgactaaggatttgatgaaagaaaaagtacaacttgaaaag
aaatttgaaacacttcgagagaacttagaacgacaagttaaactattagaacaagagaac
gaacgttcaaatcaaaccatagctgctttaagacaacgtgcacaaatcagtgctgaagca
caaatgaaagaaactgaaaacgaaaacaaaattcttcacgagtctattaaggaaaccagc
agtaaattaaataagcttgaatttgaaataaaacaagtcaagaaagaaatggaacactat
aaagagaaagcagagagagcagaagaacttgagaatgagctgcatcgtctggagaaggaa
aacgaattactgcagaaaaaaattgctaacttaaatatcacctgtgagaagatagaggcc
ttagaaaaagagaactcggacctggacatagaaaacagaaagctgaagaaaactttggat
agtctgaaaaacctctcatttcaactggagtccttagaaaaggaaaactcccaacttgat
gaagaaaatttagagttaagaagaaggattgaatcttcaaagtgtacaagcattaaaatg
gcacagttacagttagaaaataaggagctggagagcgaaaaggagcagcttaaaaaaagc
cttgaactcatgaaagcgtcgtttaagaaaagtgaacgcttagaagtcagctaccaaggt
ctagacacagaaaaccaaaggctacagaaagcccttgaaaacagcaataagaaaattcag
caattagaaagtgaattacaagatttggaatccgaaaatcaaactctgcagaaaaactta
gaggagttggtaatttctagtaagcgcctggagcaactggaaaaagagaataagttgtta
gaacaggagacttctcaactggaaaaagataagaaacagctagagaaagaaaataaaaga
cttcgacagcaagcagaaattaaagacagtactttagaagaaaacaatgtcaaaattaac
catctggaaaaggaaaataagtctctgtttaaacaaatagcagtctataaggagtcatgt
gtacgcctgaaagaactagaaatggaaaataaagaactggtgaaaagagctagcattgat
aagaaaaccctcgtcactttacgagaggacttggtgaatgaaaaactgaagacccaacaa
atgaataacgatctagaaaaactttcccatgaacttgaaaaaataggcttaaacaaggag
cgtctcttgtgtgatgagcagagtagtgatgacaggtacaaacttttggagtcaaaattg
gaatccacccttaagaagtctcttgaaataaaagaagaaaaaattgcagctttggaggct
cgtttggaagaatcaacaaatttaaaccagcaactccgtcaggaacttaaaacagtgaaa
aagaactatgaagctctcaaacaaagacaagaagaagaaaggatggttcagaatcctcct
ccaagaaagggagaagaaaatcaatctgtcaataagtgggagaaagaaaaccaggaaact
actagagaattactgaaagttaaagatagattaattgaagtggaaaggaataatgctaca
cttcaagcagagaagcaagcactgaaaacacaattaaagcagcttgagacacagaataac
aatctgcaggctcagattcttgcccttcagagacagactgtttctctacaggagcagaat
acaactctacagactcaaaatgccaaacttcagctggaagtgataagagaatgtctcacc
cagcatgagaaagggagttcctcttcttccttcagaattcagctgtttttctcatctgtt
ggagagcaggttgaaaattctacccttaattctcaaagcacatctctaatgaatcagaat
gcacaactgttgattcaacagtctgctttagaaaatgaaaaggaaggtgtgctcaaggag
ctggaggatctgaagtcgttgtacgattcacttctcaaagaccatgaaaaactggagcac
ctacatgaacgccaagcttctgagtatgagtcactgattgctaaacatggaagtcttaaa
tctgcacacaaaaatctggaggtggagcacaaggacttggaagacaggtacaatcagttg
cttaaacagaaagtgcagctggaagaattggagaaagtgctcaaaacagaacaggagaaa
atgctgcagcaaaatgaaaaacatgagactgtggcagcagagtataagaaacttcgtgat
gaaaatgataggcttgctcatacacatgatcaactcctgaaagagaacgaagttctgcaa
actgatcataagaatttgaagactttattgaacaattccaaactgggacaaacacaatta
gaagctgagttctctaaactccgagaagagtaccaactgctggatattaaatgtacaaaa
ataagtaatcagtgtgagctgcttagccagcttaaaggaaatatggaggaggaaaacaga
catctactagatcaaattcagacattaatgctacagaatagaacattacttgagcagaat
atggaaagcaaggatctcttccatgtagagcaaaggcagtacattgacaagctaaatgaa
ttaaggcgacagaaggagaaactggaggagaagataatggatcaatataaattttatgag
ccatctccacccagaagaaggggcaactggattacactgaagatgagaaaactgatgaaa
tccaagaaggatgttaatcgagaacgtcagaagtctgcaacccttacaccaacccgttca
gaatccagtgaaggatttcttcagctgccccaccaggacagtcaggatagctcctcagtg
ggctcaaactctcttgaagatggccaggtcctgggaaccaagaagagtactatggttgca
ctgaaaagactgccctttttgaggaacagaccgaaggaaaaagacaaaatgaaggccttc
tatcgtcgctccatgtccatgaatgacctggtgcagtccatggtcctagcaggaggacag
tggacaggtagttctgagcatctggagggtcctgatgatatatctgcgggtaaaaggaga
aaagaattgggagctatggccttctctactacagctatcaactttgcaactgtcaactct
tctacaggcttcagatccaagcagttgctaaataataaagatgctgtgtcttatgaagat
gtaagtccacaaggtattagtgatgactctagtacaggatcaagagttcatggagtacag
gacattaactgtgcagatgctcttgctcctcctgttcgtggcatttcaacaatgtgcaag
gttccctgtcaaatctgttcttccagaccagccagccttgatagtggcagaacatccact
agtaatagcaataacaatgcttcactccatgaagtcaaagcaggtatggttaacaatcag
agcagacctcagagtcacagcagcggagaattcagtatgctacatgaacacgatgcttgg
tcaagcagcagcagcagtcctattcagtatttgaagggtcatacaaggtccagtcctgtg
cttcagcaaaaaacacctgaaacactggatcgttgtggaaaacagatcaaaaccgattct
cctggaagtgaggttgttaccctgcagcagttcttagaagaaagcaacaaaagtacctca
agcgagatgaaatctgggagtgaagagaatcttttagatgaagtaatgagaagtttatct
gagtcatctgagctgacaggaaaggaaaagctaagaaaggcagctgctggttgtggaatt
gtgaggtcactgagtgtaaaaaacccagttgatttctcagatggacgatccattaaacca
gaacaacttgtcaggcccacccttcgtaagacagaagatgcctatttcactagctctcca
ataaaatttacatcaggcactcaagggaaggccaaatcagtgaaagaaaagatgcaaaca
tctgcatcacagcgacaatcaagggattgcaatccttatgctaccttacctcgtgcgagc
agtgtgatttctacagcagaaggaactactcgaaggacaagcattcatgattttttgtct
aaggacgttaggcaacctgtttctagtgatccagcaacatccacggctgacagaagtgtt
ccagcaacatctagtgagtactcagcacaccagttatcctctcctttttttcactgtgtg
gcttacagagtagattgtgttccacaaagcaatgcaactaacacagttaaaccacgtaat
ttaggatgcaactctgatgtgcctaagacttcaaggatggaaaggtcaaatttttgtgag
aaaactttcttaagcacaaatatgtttaatgataaagtcagtctatctggtagtgagaac
acaggatcttttactgtggtgcagccgtttttatcccttaacactgaattagttagtaat
atcagtggattgcctccaaggtctgcatcaaaagctgatcaggcaaacctgtcaatgttt
gtatccgtaccaaaaaatcaggaacagccttttaccaatcagaaatctgctaatagggac
ttacagtcagcactaagtagtgaatttgttcctaccagctgtgtgaacactagcgaggca
gaatccctgcttcttgtttctgaggataataaaactgtgtggtatgagtatggttgtgtg
tga
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integrated database retrieval system
