Phasianus colchicus (Ring-necked pheasant): 116231935
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Entry
116231935 CDS
T07365
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain
KO
K24355
collagen type XXIII alpha
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pcoc00536
]
116231935 (COL23A1)
Glycosaminoglycan binding proteins [BR:
pcoc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116231935 (COL23A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
116231935
NCBI-ProteinID:
XP_031453805
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MELNGFDPVSSECGGIEKDSVNPPTLLSVPHIPQTRAGEARAEESGRSAAAGPISAAGRA
LDEPPAGGGRQPSGSDRGAMSAGGSGSAGTATSALCLLLSLTAVAVCLLLGAKTAELQGR
LAALEERGAAGPGPLLDALQPRVEQLLREKLGEGLAKLRTAREAPSDCMCPPGPPGRRGK
PGRRGEPGPAGPLGLDGKPGPPGPKGEKGEAGDIGPRGLKGEPGDDGFVGARGPPGPKGE
PGMQGKKGDDGIPGEPGLSGSKGEKGSTGLKGENGTDGAPGPKGEPGEKGGVGSIGPRGP
PGLKGEQGDTVVIDYDGRILDALKGSPGPPGPPGPQGAPGPKGELGLPGPPGLDGEKGPK
GAKGDQGSAGITGPKGETGEMGLSGPPGADGPKGDKGDTGSPCLQNNHIIPEPGPPGLPG
PMGPPGIQGPKGLDGAKGEKGDSGEKGEHGDAGPAGLPGAPGLIGLPGTKGEKGKPGEPG
LDGFPGLRGEKGEKSERGEKGERGIPGRKGAKGQKGEPGPPGLDQPCPVGPDGLPVAGCW
HK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaatggtttcgacccggtcagcagtgaatgtggtgggattgagaaggacagt
gtgaatcctcccacgctgctttctgtcccgcacattcctcagacccgggccggcgaggcg
agagcggaggagagcggccgctccgcagctgccggccccatttcggcggcggggcgggcg
ctggatgagccgccggcgggaggcggccggcagccgagcgggtccgatcgcggcgcgatg
agcgcgggcggcagcggctcggcgggcaccgccacctccgcgctgtgcctgctcctctcg
ctcaccgccgtggccgtgtgcctgctgctgggcgctaagaccgccgagctgcagggccgc
ctggccgccctggaggagcgcggcgccgccggccccgggccgctgctggacgcgctgcag
ccccgcgtggagcagctcctgcgcgagaagctgggcgaaggactcgcgaagctgcggacg
gcgagagaggctccgtcagactgcatgtgcccaccaggccctccggggaggcgagggaag
cctggacggcgtggagagcctggacctgcaggtccccttggtttggatggcaaaccaggg
cctccaggaccaaaaggggaaaagggtgaagcaggggacatcggcccgaggggtcttaaa
ggcgagccaggggacgacggctttgtgggtgccaggggacccccggggccaaagggcgag
cctggcatgcaaggaaagaagggtgatgatggcatcccaggggaaccaggactttcgggc
tctaagggagaaaaaggaagcacaggtctgaagggagagaatggcacggacggcgcacca
ggacccaagggtgagcctggtgagaagggaggagtcggctccatcggaccccggggtccc
cctggcctgaaaggggagcagggtgacacggtggtgatcgactacgatggccgcatcctg
gatgcactcaagggctcaccaggtcccccagggccaccgggcccgcagggcgctccaggc
cccaagggggagctgggcctgccaggtccacctggactggatggagaaaagggtcccaaa
ggagctaagggtgaccaaggcagtgcagggatcacaggaccgaaaggagagacgggagaa
atgggcttatcaggtccaccgggagcagatgggccaaaaggagacaaaggagacactgga
tcaccgtgtttgcagaacaaccacatcatcccagagccaggaccgcccggattgcccggc
cccatgggtcctccaggaatccaggggcctaaaggcttggatggtgcaaagggagaaaaa
ggtgacagcggtgagaagggggagcacggcgacgcgggcccagctggtctccctggtgct
ccagggctcattggcttacctggtaccaaaggagaaaagggaaagccaggagagccggga
ttagacggtttcccaggtctcagaggagaaaagggagagaagagtgaaagaggggagaag
ggcgagcgagggataccagggagaaaaggagccaaaggccagaagggagaacctggccct
cccggactggaccaaccctgccctgtgggaccagacggcctgccagtagcaggatgttgg
cacaagtga
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