Phasianus colchicus (Ring-necked pheasant): 116231949
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Entry
116231949 CDS
T07365
Symbol
PCDH1
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116231949 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcoc01009
]
116231949 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcoc04515
]
116231949 (PCDH1)
Protein phosphatases and associated proteins [BR:
pcoc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116231949 (PCDH1)
Cell adhesion molecules [BR:
pcoc04515
]
Cadherins
Protocadherins
116231949 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
K319L-like_PKD
TMEM154
Mid2
MLANA
Syndecan
Motif
Other DBs
NCBI-GeneID:
116231949
NCBI-ProteinID:
XP_031453826
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MQTPLDQRSRSRHGAQRRPHPTPLRHRMRTLASCLALWLLCQLPALACGTRVVYKVQEEQ
PPNTLIGSLASDYGFPDVGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLP
GEPCYLEFEVSITDLIQNNSPRLLEGQIEVLDINDNTPNFASPVLTLTIPENTNIGALFS
IPPAMDRDSGPNGVASYELLAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDREQWDSYDL
TIKVQDGGNPPRASSALLRITIVDMNDNAPKFEKALYEAELSENSPVGHSVIQVKANDSD
QGANAEIDYSFHQASDMVRRLLRLDRNTGLITVQGPIDREDVSTLKFSVMAKDKGANPKS
ARTQVVVTIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENA
VVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYESVKDYTIEIVAVDSGNPPLSS
TNSLKVQVVDVNDNAPVFSQSFTEVAFPENNEPNDLVMEVSASDADSGSNAKLVYSLVTD
PSSKDSFTIDPDSGEIRVKAVLDREQRERYEFLVVAADKGSPSLKGTASVAINVMDRNDN
DPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTIL
SSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILP
HTSPGQQVSKVKAEDIDTGVNAELTYSITGGNPFELFQISPQSGDITLEKEILRKHHGLH
RLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSK
QRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKS
KNKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHY
RSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKY
TNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHY
ERTTPDGSIGEMEHPENGRC
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgccgctggatcagcgctccaggagccggcacggagcgcagcgccggccgcat
ccaactcccctgaggcacaggatgaggaccctcgcttcctgcctggccctgtggctcctc
tgccagctgcctgcccttgcttgcgggacgcgtgtggtctacaaagtgcaggaggagcag
ccccccaacacactcatcggcagcctggcctctgactacggcttccccgacgtggggcac
ctctacaagctggaagtgggggccccgtacctgcgtgtggatggcaaaacaggagacatc
tacaccacagagacctccatcgaccgggagagtttgcgtgaatgccagcacctgctgccc
ggagagccctgctacctggagttcgaagtgtccatcactgacctgatccagaacaacagc
ccgcgcctgctggaggggcagatcgaagtgcttgacatcaatgacaacacccccaacttc
gcctcacctgtcctcaccctgaccatccctgagaacaccaatatcggggctctcttttcc
atccctccagccatggaccgggactcggggcccaacggcgttgcctcctatgagctactg
gctggccctgaggcacaggaactctttgggctgcaggtagctgaggaccaggaggagaag
cagccacagctgatcgttatgggaaacctggaccgggagcagtgggactcctatgacctg
accatcaaggtgcaggatgggggcaacccgccacgggccagcagtgcattgctgcgcatc
accatcgtggacatgaatgacaatgcacccaagtttgagaaggccctctacgaggctgag
ctgtctgaaaacagtcccgtggggcactccgtcatccaggtgaaggccaatgactcggac
cagggtgccaatgccgagattgactactccttccaccaagcatcagatatggtgcgccgg
ctgctgcgcctggatcgcaacacagggctcattactgtccaggggcccattgaccgtgag
gatgtcagcaccctcaagttctccgtcatggccaaagacaagggggctaaccccaagagt
gcccgcacacaggtagtggtcaccatcaaggacatgaatgacaacgcaccctctatagaa
attcggggcattgggttggtcacccaccaggatggcatggcaaatatctcggaggatgta
ccagtagagacagcagtggctctggtacaggtgtccgatcgagatgagggtgagaatgct
gtggtgacctgtgtggtggctggggacgtccccttccagctgcggcaggctagtgaaaca
gggagcgacagcaagaagaaatacttcctgcagactaccacacctctggactatgagtcg
gtgaaggactacacaatcgagattgtggcagtggactcggggaacccgcccctttccagc
accaattcgctgaaggtgcaggtagtagatgtgaatgacaatgcgcccgtcttcagccag
agcttcaccgaggtagccttccctgagaacaacgagcccaatgacctagtgatggaggtg
agtgccagtgatgcagacagtggctccaatgccaagctggtttactcactggtgaccgac
ccatcctccaaggactccttcaccatcgatcctgactccggagagattcgagtgaaagcg
gtgctggatcgtgagcagcgggagcgctacgagttcttggtggtggcagcagacaagggc
agccccagcctgaagggcacagcgtcggtggccatcaatgtcatggataggaatgacaac
gaccccaagttcatgctgagcggctacaacttctcggtgatggagaacatgccacccctc
agccccgtgggcatggtgacggtgatcgatgctgacaaaggagaaaatgcccgaatccag
ctgtctgtagagcaagacaatggggattttgtcatccagaatggcactggcaccattctc
tccagcatctcttttgaccgggagcagcaaagtacgtacactttccgactcaaggctgtg
gacggtggggatccacccaggtctgcctacgtaggggtaaccatcaatgtcttggatgag
aatgataatgctcccttcatcacctcgccctccaatgccacctacaagcacattctgccc
cacactagccctggccagcaggtgagcaaggtcaaggcagaggacatcgacaccggcgtc
aatgccgagctgacctacagcatcacaggaggcaacccctttgagctcttccagatctcc
ccccaaagtggagacatcacactggagaaggagatcctgcgcaagcatcatggcctgcac
cgcttggttgtgcgtgtcaatgacaagggcaagccgtcacggcacggcacggccctggtg
cacttctatgtcaacgagactttggccaatcgcacactgctggacacgctggtggggcac
agcctggacacaccacttgacatagacattgctggggaccccgagtatgagcgcagcaag
cagagaagtaacattctctttggagtcattgctggcattgtggctgtcaccttggtcatt
gtgctggttgtcctggtgcgttactgccgacagcgggaggccaagagtggctaccaggca
gggaagaaagagaccaaagacctgtatgcgcccaagcaggccagcaagagtggcaagagc
aagaacaaggtgaagaagagcaagtctccgaagccacccaaaccaacagaggatgaggag
gagacagggctgcagaaatccctcaagttcaacctgatgaatgactctgtcagtgacagc
ccccgtatccacctgcccctcaactacccaccgggcagcccggacctgggccggcactac
cgctccaactcacccctgccttccatccagctgcagccccagtctccctctgcctccaag
aagcaccaagtggtgcaggacctgccggccaccaacacctttgttggcaccggggacaac
aactcaacgggctccgagcagtactcggactacagctaccgcaccaatccccagaaatac
accaacaagcagttacctcatcgccgagtgacattctctgcagccagccaggcccaggac
ctacaggacccctcccagcacagctactatgacagcgggcttgaggagtcggagactccc
agcagcaaatcatcatcggggccccgcattgggccactggctctgcccgaggaccactat
gagcgtaccacgcctgatggcagcattggagagatggagcaccctgagaatggtaggtgc
tga
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