Phasianus colchicus (Ring-necked pheasant): 116232451
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Entry
116232451 CDS
T07365
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116232451 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcoc03041
]
116232451 (DDX5)
03009 Ribosome biogenesis [BR:
pcoc03009
]
116232451 (DDX5)
Enzymes [BR:
pcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116232451 (DDX5)
Spliceosome [BR:
pcoc03041
]
Complex A
U1 snRNP components
U1 related factors
116232451 (DDX5)
Complex B
116232451 (DDX5)
Ribosome biogenesis [BR:
pcoc03009
]
Eukaryotic type
Pre-60S particles
Helicases
116232451 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
P68HR
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
116232451
NCBI-ProteinID:
XP_031454655
Ensembl:
ENSPCLG00000008765
UniProt:
A0A669PQZ3
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MPGYSSDRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VVRRTAQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSR
GDRRDRYSAGKRGGFSSFRERENFERTYGALGKRDFGAKAQNGAYSTQSFSNGTPFGNGF
AAAGMQAGFRAGNPAGAYQNGYDQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPAS
YSQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggtattccagcgacagggatagagggtttggagcccctcgttttggaggaagt
agagctggtccgctttcggggaaaaaatttggaaaccctggggaaaaacttaccaaaaag
aaatggaatttagatgaactgcccaaatttgaaaagaacttctatcaagaacatcctgat
gtagttagacgtactgcgcaagaggttgagcagtacaggtcaagcaaagaagttacagtt
aggggccataactgtccaaaaccaataataaacttctatgaagctaactttcctgcaaat
gttatggaagtgattcagaggcagaacttcaccgagcctactgcaattcaagcacaagga
tggcctgttgccttgagtggattggatatggttggagttgcacagactggatcagggaaa
acactgtcttacttgttgcctgctatcgtgcatataaatcatcagccattcctggagaga
ggagatggacctatttgtcttgtgctggcaccaactcgtgaactggctcagcaagtgcag
caggtagctgctgaatatagcagagcgtgtcgcttgaagtctacatgtatttatggaggt
gctccaaagggaccacaaattcgtgatttagaaagaggtgtggaaatttgcattgcaaca
cctggaagacttatagacttcttagaagctggaaagaccaatctcaggaggtgcacttac
cttgtccttgatgaagctgacaggatgcttgacatgggatttgaacctcaaatcagaaaa
attgtggatcagataagacctgacaggcaaactctgatgtggagtgccacatggccgaag
gaagttaggcagctggctgaagactttttaaaagaatatgtacacatcaacattggtgca
ttagaactgagtgcaaatcacaacatccttcagatcgttgatgtgtgtcatgatgtagag
aaggatgacaagcttattcgtttgatggaagaaatcatgagtgagaaggaaaataagaca
attgtttttgtagaaaccaaaagacggtgtgatgatcttaccaggaaaatgaggagagat
gggtggccagcaatgggtattcatggtgataaaagccagcaggagcgtgactgggttcta
aatgaattcaaacatggaaaagcaccaatcctgattgctacagatgttgcatccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatatacattc
tttactcctaacaatattaagcaagtaaatgacctcatctctgtgcttcgggaggctaat
caagccatcaaccctaaattgcttcagttgattgaagacagaggttcaggtcgttcccga
ggtgaccgacgtgacagatactctgcgggcaaaaggggtggatttagtagctttagagag
agggagaactttgagagaacttatggtgcactaggaaagagagactttggagccaaagct
caaaatggggcctacagtacccagagtttcagtaatggaactccttttggaaatggcttt
gcagctgcaggcatgcaagctggcttcagggctggtaaccctgcaggagcttaccagaat
ggctatgatcagcagtatggaagtaacattgcaaatatgcacaatggcatgaaccaacag
cagtatgcgtatcctgccactggtgctgctcctatgataggttacccaatgccagcgagt
tattctcaataa
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