Phasianus colchicus (Ring-necked pheasant): 116232457
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Entry
116232457 CDS
T07365
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116232457 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoc03400
]
116232457 (MSH2)
DNA repair and recombination proteins [BR:
pcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
116232457 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
116232457
NCBI-ProteinID:
XP_031454670
Ensembl:
ENSPCLG00000003584
UniProt:
A0A669PQZ7
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MAGGGSMAAEAPREAVWPEGAGAEAGFVRAVLSLLEKPDTTVRFFERGDYYSVHGADARL
AARELFRTRAVIRQLAGAPGNQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSKS
VKENDWYLAYKGSPGNLAQFEEVLFANNDMSMAIGVVGVKLSSADGQRVIGVGYVDTTLR
KLSVCEFPDNDQFSNLEALLVQLGPKECVLPGGDTAGEMGKLRQVIQRGGILITDRKKAD
FTTKDIVQDLNRLLKSRKGEQMNSAALPEMEKQVAVSSLSAVIKFLELLSDDSNFGQFEL
TTFDLSQYMVLDNAAVQALNLFQSSVENANNTQSLAGLLNKCRTPQGQRLVNQWIKQPLM
DKNRIEERLNLVEAFVVDTELRQGLQEDLLRRFPDLNRLAKRFQRQAATLQDCYRMYQAI
HQLPNVVQALEKHEGAHQMLLLAVFITPLNDIHSDFSKFLEMIETTLDMDKVENHEFLVK
ASFDPNLTELREKMNELEENMQTLLKSAAKELGLEAGKSIKLESNSQFGHHFRITCKEEK
VLRNNSKYKITDTQKNGVKFTNSKLSAINEDYIKNREEYEEAQDAIVKEIINIASGYAEP
IQTMNDVIAQLDAIVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGARHPCIEVQDEVAFI
PNDVTFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILAR
VGAGDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIA
SKICAFCMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKAGVCDQSFGIHVA
ELAAFPKHVIESAREKALELEEFQDIGRPKESEGEPAAKKCYREREEGEKIIQDFLCQVK
ALPLTDMSEEDIKTKLKQLRADVLAKNNSFVNEIISRTKVTP
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggcggcagcatggcggccgaggcgccgcgggaagcggtgtggccggagggc
gcgggggccgaggcgggcttcgtgcgcgctgtgctctccctgctcgagaagccagacacc
accgtgcgcttcttcgagcgcggcgactactactcggtgcacggcgcggacgcgcggctg
gccgcccgcgagctgttccgtacgcgggccgtcatccggcagctggcgggcgcgccagga
aatcagaaactggagagcgttgtgctcagtaaaatgaactttgaatcttttgtgagagat
ttgctgctggttcgtcattacagagtggaagtttacaagaataaagcagggagtaaatct
gtcaaagagaacgactggtatttagcatacaagggttctccgggaaatcttgcccagttt
gaggaagttctctttgccaacaatgatatgtcaatggccattggggttgtgggggtgaag
ctgtcttctgctgatggacaaagagtaataggagtagggtatgtggacactacgctgaga
aaactgagtgtctgtgagttcccagataatgatcagttctcaaaccttgaggccctgctg
gttcagctaggacctaaggagtgtgtgctgccaggaggagacactgcaggagagatgggg
aaactgcggcaggtcattcagagaggaggaatcctgattacagacagaaagaaggcagat
ttcacgacaaaggatattgttcaggatctcaatcgcttgttaaaatcgagaaaaggagaa
caaatgaacagtgcagcattgccagagatggaaaagcaggttgctgtttcatctttgtca
gccgttatcaagtttttggagttgctgtcagatgactctaactttggacaatttgaactg
actacttttgatcttagtcagtatatggttctagacaatgcagctgtccaagccctcaac
ttgttccagagttctgtggaaaatgctaataatacacagtctctggctggtttactaaat
aaatgcagaacccctcaaggacaaagactggttaatcagtggatcaaacagccactgatg
gacaagaatagaattgaagaaaggttgaatttggttgaagcctttgtggtagatactgaa
ctgcgtcagggccttcaagaagatcttttgcgccgcttcccagatcttaaccggctagca
aagagatttcagagacaagcagcaaccttacaggactgttaccgaatgtatcaagctatt
caccaactgcctaatgttgtacaagcactagaaaaacatgaaggagctcaccagatgttg
ttgttggcagtgtttataacacctcttaatgatatccactccgacttctcaaaatttctg
gagatgatagaaacaacattggatatggataaggtggagaatcatgagttccttgttaag
gcttcttttgaccccaacctgacagaattgcgagagaagatgaatgagctggaagaaaac
atgcagaccttgttaaagagtgcagccaaagagcttggtttggaagctggtaaaagtatc
aaattggagtcaaattcacagtttggacaccactttcgaattacttgcaaggaagaaaag
gttcttaggaacaattcaaagtacaagataactgatacacagaagaatggtgtgaaattt
acaaacagcaagctgagtgccatcaatgaggattacataaagaacagagaagagtacgaa
gaggctcaggatgcaattgttaaggaaattattaacatcgcttcaggttatgcagagcca
atacagaccatgaatgatgtaatagctcagttagatgcaattgtcagttttgctcatgtg
tcaaacggagcgccagtgccgtatgttcgtcctgtcattctggaaaaggggcaaggaagg
attgtgctgaaaggcgccaggcatccttgcatcgaagtgcaagatgaggtggccttcatc
cccaatgatgttacatttgagaagggcaagcagatgttccacattattactggccccaac
atgggtggaaagtcaacgtatatccgacagacaggagtcattgttcttatggcccaaatt
gggtgctttgtaccatgcgactctgcagaaataaccattgtggattgcatcctggctcga
gtaggagctggagacagtcagctgaaaggtgtgtctactttcatggctgaaatgttggaa
actgcttcaatccttaggacagcatctgaaaactctttgataattattgatgagctggga
agaggaacttcaacctacgacggctttggcttggcgtgggctatttcagagtacattgct
agcaaaatttgtgctttctgtatgtttgctacacattttcatgaactgacagctcttgct
gatcaagttccaacagtaaataacctacatgttactgctctaaccagtgacgacacactg
acaatgctgtatcgtgtcaaggcaggtgtttgtgaccagagttttggaatacatgtagca
gagttggcagctttcccaaaacatgtgatagaaagtgcaagagagaaagcactggaactg
gaggagtttcaagacattggcaggcccaaggaatctgaaggagagccagcagccaagaaa
tgctacagagaaagagaggaaggtgaaaagatcattcaggattttctctgtcaagtgaaa
gcattgcccctgacagatatgtcagaagaagacatcaaaaccaagctgaagcagctgaga
gctgatgtgttggcaaagaacaacagtttcgtgaatgaaatcatttccagaacaaaagtt
acaccatga
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