Phasianus colchicus (Ring-necked pheasant): 116232470
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Entry
116232470 CDS
T07365
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116232470 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoc03400
]
116232470 (MSH6)
DNA repair and recombination proteins [BR:
pcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
116232470 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
116232470
NCBI-ProteinID:
XP_031454700
Ensembl:
ENSPCLG00000003589
UniProt:
A0A669P5P9
LinkDB
All DBs
Position
Unknown
AA seq
1343 aa
AA seq
DB search
MSRQSTLLRFFPKAQQPRAAATPPPAGGENRCRSSREQNGFEAAARPAERSKENGKADGA
AAKGRGVSSVYSPGDLVWAKMEGYPWWPCLVYNHPTEGTIVRGKGSSARIHVQFFDVSPT
RGWVSIKYLRPYKGSSDREVLKGGMFYSTKPEIKKAMELADDAMSKDKPKRLELAVCSEP
SDAEEAEEEEMEQMSGSASGDSDDSNSEEDVKGNKRVPNRGSAVKAKRRRVLDSDSDRDG
SDVEFKPDVKEAASSEEASSGVDENEATDAETDAESIEESPIKVPSKRKRGNVSKPSKRS
SLENERSEAPKRAAPLSLEAKSKLTLFAAPENFESQANACSGGTSGFAAWEHEKLEWLQE
GKKKDAHRRRQNDPDYDPCTLYVPEDYLNKCTPGMRRWWQLKSQNFDAVICYKVGKFYEL
YHMDAVIGVNELGLIFMKGSWAHSGFPETAFGRFSAILVQKGYKIARVEQTETPEMMEAR
CKATAHPTRFDRVVRREICRILTKGTQTYSIIDCDPSENHNKYLLCVKEKEDSSGQRVYG
VCFVDTSVGKFFVGQFSDDRHCSRFRTLVAHYTPVQVLFEKGNLTVDTQKILKGSLISCI
QEGLISGSQFWNASKTLKVLLEEEYFKENQNPENGCVLPSVIKSLTSESDSLGLTPGENS
ELALSALGGIVFYLKKCLIDQELLSLANFEKYVPVDADNAKTASASNFFARTDQRMVLDG
VTLMNLEVLQNGTNGTTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPTSINDRLDAVED
LLAVPAKLTEISEHLKKLPDLERLLSKIHSIGSPLKSQNHPDSRAIFYEEIKYSKKKIAD
FLSALEGFKVMNEIVDAMEEVASDFKSQVLKQLVTRKAKHPDGRFPDLSAELKRWDTAFD
HNQARKTGVITPKAGFDSDYDKALQDIKTVEEDFRTYLDKQRKLLGLKSVLYWGTGKNRY
QMEIPETAISRNLPEEYELKSTRKGYKRYWTKEIERMLAELINAEERRDAALKDCMRRLF
YNFDKNSQDWQTAVQCIAVLDVLMSLANYSQDGDGPLCRPVILLPVDSSPPFLELKNARH
PCITKTFFGDDFIPNDIVIGSKDEDGGSEASCVLVTGPNMGGKSTLMRQAGLLVIMAQLG
CYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETSSILQHATEHSLVLVDELGR
GTATFDGTAIASAVVRELAENIKCRTLFSTHYHSLVEDYSGSAAVRLGHMACMVENESED
PSQETITFLYKFIEGACPKSYGFNAARLADIPEEVIQKGHRKAKEFEKKTMSLRIFRFLC
RVVDGATRDANAVGKLSTMLSHL
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcagagcaccctgctccgcttcttccccaaggcccagcagccgcgggccgcc
gccacccctccgcccgccggcggggagaaccgctgccgctcttccagggagcagaacggt
ttcgaggccgccgccaggcccgcggagcgtagcaaggagaatggcaaagcggacggggcg
gccgccaagggccgcggtgtctccagtgtttattctcctggggacttggtctgggccaag
atggaaggctatccctggtggccgtgcctcgtctacaaccaccccacggagggaactatc
gtcagagggaaggggagttctgctcggatccacgtgcagttctttgatgtcagtcccacg
aggggctgggtcagcatcaagtacctgaggccgtacaaaggctcatcagacagagaggtg
ctgaagggaggtatgttctatagtacgaagcctgaaattaaaaaagcaatggagctggca
gatgatgccatgagtaaagataaacctaagcgacttgagctggcagtgtgcagtgaacct
tcagatgctgaggaggcagaggaggaggaaatggagcagatgagtggaagtgcatcaggc
gacagtgatgacagcaatagtgaggaggatgtgaagggcaataagcgagtaccaaacaga
ggaagtgctgtaaaagccaaaagaagaagagtgctggattcggacagtgatcgtgatggt
tctgatgtagagttcaagcctgatgtgaaagaagcagcgagcagcgaggaagctagtagt
ggggtggatgaaaatgaagctactgatgcagagacagatgcagagagcattgaagaaagt
cccataaaagtcccttctaaacggaagagaggaaacgtcagcaagccttctaaaaggagt
agcttagaaaatgaacgttctgaagcacccaaaagagcagcaccactttcgttagaggcc
aagtctaagctgacattgtttgcagcacctgaaaattttgagtctcaggcaaatgcttgc
agtggaggcactagtggctttgcagcatgggaacatgagaagcttgagtggctgcaggaa
gggaaaaagaaagatgcacacaggagacgacagaatgaccctgactatgacccatgtact
ttgtatgtacctgaggactaccttaacaaatgtacgcctggaatgcggaggtggtggcag
ctgaaaagtcaaaacttcgatgcggtgatttgctacaaagttggaaaattctatgagttg
tatcacatggatgcagtcattggtgtgaatgagctgggcctgatatttatgaaaggttca
tgggctcattccggttttccagaaactgcatttggcagattctctgctattctggttcag
aaaggctacaagatagcccgtgttgagcaaacagaaactcctgaaatgatggaagcgcgc
tgcaaggcaacggcccacccaaccaggtttgacagggttgtacgtcgggaaatctgcaga
atccttactaagggcactcagacttacagcattatagattgtgatccatcagagaaccat
aacaaataccttctgtgtgttaaggaaaaagaagactcctctggacaacgtgtttatggg
gtctgttttgttgacacatcagttgggaagttttttgtcggccagttttcagatgaccga
cactgctccaggtttaggactttagtggcacattacactcctgtgcaggtcctgtttgag
aaggggaacctgactgtagacactcagaagatactgaaaggctcgctcatttcttgcatt
caggaggggctgatctctggctcccagttctggaatgcatctaaaacactaaaagttctt
cttgaagaagagtatttcaaggagaatcaaaaccctgagaatgggtgtgttctgccctct
gtaatcaaatctctgacttcagagagtgactcgctggggttaactcctggcgaaaacagc
gagttagctttgtcagctcttgggggaattgtcttctatctcaaaaagtgtctgattgat
caggagctgctatcgctggcaaactttgagaagtatgtccctgtggatgctgataatgca
aaaactgcaagcgccagtaatttctttgccagaactgaccagcgcatggtgctggatgga
gtcactctgatgaatctggaagtcctgcagaatggaaccaacggaaccacggaaggtacc
ttgttggagaggattgactcctgttgtacaccgtttgggaagcggctcctgaagcagtgg
ctttgtgctccgctttgtaatcctacatccattaatgatcgtttagatgctgttgaggac
ctgctggcggtgccggctaaactgactgaaattagtgagcatctgaagaaacttcctgac
cttgaaaggctgctcagcaaaattcacagcattggatcaccgcttaaaagtcagaaccat
cctgacagcagggccatcttttatgaagaaattaaatacagcaaaaaaaaaattgccgac
tttttatctgcactggaggggtttaaagtaatgaatgaaattgtcgatgccatggaagaa
gttgccagtgacttcaaatctcaagtccttaagcagttagtcacccgcaaagccaaacat
cctgatggacgcttcccagacttaagtgcagagcttaaaaggtgggatactgcttttgat
cataaccaggctcggaagacaggagtgattactccaaaggcaggttttgactccgattat
gataaagcactacaggacattaaaactgttgaggaagatttccgtacgtacctcgataag
caacgcaaactgcttggactcaaatccgtgctgtactgggggacgggcaaaaatcggtat
caaatggaaataccagaaaccgccatatcgcgtaatttacctgaagaatatgagctgaag
tcaaccaggaagggatacaaacgttactggaccaaggagattgagaggatgctggctgag
ttgattaatgctgaggagcgaagagatgcggctctgaaagactgcatgaggcgtttgttt
tacaactttgacaaaaacagccaagactggcagacagccgtacagtgcatcgctgtgcta
gatgtcttgatgtcccttgctaactacagtcaagatggtgatggaccactgtgccgacct
gtaattctactgcctgtggatagttctcctcccttcctggaactgaaaaatgcacgccat
ccttgcattacaaaaactttctttggggacgattttattcctaatgacatcgtgataggc
agtaaagatgaagatggcggtagtgaagcttcctgtgtgctagtcactggcccaaacatg
ggtggcaaatcaacactcatgagacaggctggtctcctggttataatggctcagctggga
tgctacgtgcctgctgaggtctgcaggctcactcccatcgacagagtatttacacggctc
ggtgcctctgacagaatcatgtcaggtgaaagtaccttctttgttgaattaagcgagact
tccagcatcctgcagcatgcaacagagcattccctcgttcttgtggacgaactcggccga
ggcacggctacgtttgatggaacagcgatagcaagtgcagttgttagagaacttgctgag
aacatcaagtgtcgcacgctgttctccacacattaccactccttagtagaggactactca
ggcagcgcggccgtgcggcttggacacatggcttgtatggtggaaaatgagagcgaagat
ccaagccaggaaacaattacatttctgtataaattcattgaaggagcgtgtccaaaaagc
tatggcttcaatgcagcaagacttgctgacatcccagaggaagttattcagaaagggcac
agaaaagcaaaagagtttgaaaaaaagacaatgtcactgagaatattcaggtttctgtgc
cgggtggtggatggtgcgacacgtgatgcgaacgcggtagggaagctcagcactatgctc
agtcacctttaa
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integrated database retrieval system
