Phasianus colchicus (Ring-necked pheasant): 116232709
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Entry
116232709 CDS
T07365
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03013
Nucleocytoplasmic transport
pcoc05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116232709 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
116232709 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116232709 (NUP98)
03036 Chromosome and associated proteins [BR:
pcoc03036
]
116232709 (NUP98)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116232709 (NUP98)
Chromosome and associated proteins [BR:
pcoc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116232709 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
116232709
NCBI-ProteinID:
XP_031455102
Ensembl:
ENSPCLG00000011276
LinkDB
All DBs
Position
Unknown
AA seq
1647 aa
AA seq
DB search
MFNKSFGTPFGGNTGFGTTSTFGQNAGFGTTGGGAFGTSAFGANNNTGGLFGNTQAKPGG
LFSSNAFNQPATSSTSTGFGFGTSTGTSSSLFGTTSTGGGLFSSQSNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGNPSGSLFGPTSFTATPTGTTIKFNPPTGTDSMVKSGVST
TINTKHQCITAMKEYESKSLEELRLEDYMANRKGPSNPVGAGATTGLFGTSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTTTTGFGTGTTGGLFGQQTQTTSLFNKPFGQATTTQNTG
FPFGNTSTLGQPNTSTMGPFGATQPSQPGGLFGTAATTNAGTAFGTGTGLFGQANTGFGV
GGSTLFGSKPAGFGTTTTSTSFGTTTGGGLFGFGANNAGNSLFGNKPATGTLGTGLGTGF
GTALGAGQTSLFGNTQPKLGGTLGTGAFGAPAFNTSTATLGFGAPQPAVALTDPNASAAQ
QAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQSAGSAKSQLFDGLDDDEPSLSNGAFMPKKSIKKLVLKNLSGSSLFSPVNRE
NDDLASPSEYPENGDRFFLSVPPDENHKQDGEREEEEDHHEVTRFYTNPIAKPIPQSPEN
TVHKHQNSVDDTIVALNPRAALRNGLEGSSEDASFHDDSIQDEREEETETVHHVHPAGIV
LTRAGYYTIPSMEELAKFTNDKNECIVTDFTIGRKGYGSIFFEGEVNLTNLNLDDIVHIR
RKEVIVYPDDERKPPIGEGLNRRAEVTLDGVWPTDKTSRGLIKSPERLAEMNYEGRLESV
SRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPLKVDAKKLKTTPVPPPGHL
PPQQMTLNGKPTPPAQSPEVEQLGRVVELDSDMADVTQEPPQEPAVQDSMAEEQEAVPAS
AHIASTLGINPHVLQIMKASLLADEDDLDLILDHHSGKQPTKMDTSQEICSPRLPISKSQ
GQKRCSVAGLLQSKFADTIFQPPSTALYDLQEPRASRSSPSPACWSASSPLASAFTVPPS
VPEVQMRTVGVRRQQGLVPLESSITYGKGKLLMDMALFMGRAFRVGWGPNWTLVNCGDQL
SGSSGMEDLPCEAAEYGFLPAPVAPKLLPESPFKVHVEKLNLEQRKMNRDKQLYLIPLEI
KLKHSTVHMDEQCPLLAPNPGVSAIHDYADWVRTASEDPAVMETVVKHWCLTWTLCEAIW
GNLKELEASLEEPSEYVLALERRRAFSRWLSETAAARIDKEVALTQHHNHVEAVFSCLTG
RRIGEACRLAQQAGNHRLALLLSQLVGSQPTRDLLTIQLVDWHRLQADCFIPEERLRIFA
LLAGKPVWQLSERTSINVCSQLDWKRCVAIHLWYLLPPTASISQALAMYEAAFQTTSESE
KYACCPLPPYLEGSGCEIEEDDNAGRPLRDVCFHLLKLYSDRHYDLDQLLDPRSITSDPV
DYRLSWHLWEVLRALNYSHLSRQGQGVLNASYAAQLESEGLWEWAVFVVLHEPNTHIREK
AVRELLGRHCALCETPESWAKETFLTQRLCVPAEWIHEAKAVRARMEGDKHKEALFLFKA
GHWNQCHKLVVRHLASGEPGTICPILF
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatctttcggaactccttttggaggtaacactggctttggaacaacatca
acttttggacaaaatgctggctttggtaccacgggtggaggagcgtttggcacatcagcc
tttggggcaaacaacaacactgggggcctctttgggaacacccaggcaaagccaggaggg
ctcttcagttccaacgcctttaatcagccagccacctcctccaccagcactggctttggg
tttggaacatccactgggacatccagcagcctgtttggtaccaccagcactggtggaggc
ctcttctcatcccagagcaatgcctttgcacagaacaagcctgctggctttggaaacttt
ggtacaagtaccagcagtggaggtctctttggaaccaccaacaccacttctaatcctttt
gggaatccatctggctctctgtttggcccaaccagttttactgctactccgactggcaca
accattaaattcaatcccccaactggtacggatagcatggtcaagtctggagttagcacc
actatcaataccaagcaccaatgcatcactgctatgaaggagtatgagagcaaatctctc
gaggagctgcgtttagaagactacatggccaataggaaagggccctcaaatcctgtggga
gcgggagccactacaggcttgtttgggacttccactgctacttcgagcacagctacagga
ctttttggctcttctaccactaatacaggcttttcatatggacagaataaaactgctttt
ggaacgactacgactggctttggaacaggaacaacaggaggtctttttggtcagcagact
caaactacaagtctgtttaacaaaccatttggtcaggccacgacgactcagaacacaggc
tttccatttgggaataccagcactctaggacagccaaacacgagcacaatgggtccgttt
ggggccacgcagccctcgcagcctggaggcctttttggaacagctgccactaccaatgct
ggcactgcgtttggaaccggaactgggctttttggacaagcaaacacaggatttggtgtt
ggcggttcgaccctgtttggtagcaaacctgctggatttggaaccaccacgaccagtacc
tcatttggtacaaccactggcggcgggctctttggttttggtgccaacaatgctggaaat
agcttgtttggaaataagcctgcaacagggactctgggaactgggcttgggacagggttt
ggaacagccctcggggcaggacagacatcattatttggaaacacccagcctaaactcggt
ggcacactgggaacaggagcttttggagcaccagcattcaatacttccactgctactctg
ggttttggagcccctcagcctgctgtagcactgacagatcctaatgcatcagctgcccag
caggcagtcctccagcagcacctcaatagtttgacttattcaccctttggagattctcca
cttttcagaaaccccatgtcagatccaaagaagaaagaagagcggctgaaaccaaccaac
cctgcagctcagaaggccttaacaacacccacccactacaaactgaccccacgtccagca
accagagtgcgcccaaaggctttgcagtctgcaggctctgccaagtctcagctctttgat
ggcctcgatgatgatgagccatccctatccaatggtgccttcatgccaaagaagagcatc
aagaagttggttttgaagaacctcagtggcagcagtctgttctctcctgtcaatcgtgag
aatgatgacctggcatctccatcagagtatccagagaatggagacaggttctttttgtcg
gtacctcctgatgaaaaccacaaacaagatggtgagcgcgaggaggaggaggatcaccac
gaagtgacgaggttttacaccaaccccattgccaagcccatcccacagagccctgagaac
actgtgcacaaacaccagaacagtgtggatgacaccatcgtggccctcaatccacgggca
gccctgcggaacggcctggagggcagcagtgaggatgcttcatttcacgacgattcaatt
caggatgaacgtgaagaagagactgagacagtgcaccacgtccatcctgcaggaattgtt
ctaaccagagctggctattacaccatcccatctatggaggagctggccaagtttaccaat
gacaaaaatgaatgtattgtgactgacttcaccataggccgtaaaggttacggatcgatt
ttctttgaaggagaagtaaatctaactaacctgaatctggatgacattgtacatatccgt
aggaaagaggttattgtctacccagatgatgaaagaaagccacctattggtgaaggcctc
aatagacgagctgaagttacattagatggagtttggcctacggataaaacttctcgtggc
ttgataaaaagcccagaacgactggcagagatgaattatgagggcaggctggagtctgta
tctcggaagcagggcgctcgcttcaaggagtaccgccctgagactggatcttgggtgttc
aaggtagcacacttctccaaatatggcctgcaagattcagatgaggaagaggaagagcat
cctttaaaagtggacgcaaagaagttaaaaaccacaccagtacctcctccagggcatctg
ccacctcaacaaatgaccttaaatggcaagccaacgcctccagctcagagccccgaggtg
gagcagctgggcagagtggtggagctggacagtgacatggcagacgtcacccaggagcct
cctcaggagcctgcagtgcaggacagcatggcagaggagcaggaagcagtgcctgcttct
gctcacattgcgtcgacgctgggcatcaacccccatgtcttacagattatgaaagcttcc
ttgcttgctgatgaagatgacctggatttaatcctggaccatcactctgggaagcaacct
acaaaaatggatacttctcaggagatctgttctccaagactccctatctcaaaatcccaa
ggacagaagagatgctcagttgctgggctgctgcaatcaaagtttgctgataccattttc
caaccacccagcactgctctttatgacctccaggagccaagggcatctcgcagctcccct
tcccctgcctgctggtcagcatcctctccattagcatcagctttcaccgtccctccatcg
gtccctgaggtgcagatgaggacagtgggtgtccgtaggcagcagggcttggtccctctg
gagagctccatcacctatgggaaggggaagctgctgatggacatggcactgttcatggga
cgtgccttccgcgtgggctgggggcccaactggactcttgtcaattgtggggatcagctg
agtgggtcgagtgggatggaggaccttccatgtgaggctgcggagtatggattcctgcct
gctcctgttgctccaaaactactcccggagtcccctttcaaggttcatgtggagaagctg
aacttggaacaaaggaagatgaacagagacaagcagttgtatcttatccctctggagata
aagctgaagcatagcactgtccatatggacgaacagtgtcctctcctggctcccaaccca
ggagtttctgctattcatgactatgctgactgggttcgaacagcatctgaggatcctgct
gtaatggagactgttgtgaagcactggtgcttgacgtggactttatgtgaagcgatctgg
gggaacctgaaggagctggaggccagcctggaggagcccagtgagtacgtcctggccctg
gagcgcaggagggctttttctcgttggctgtcggagaccgcagcggcacggattgataag
gaggttgctttgacccaacaccacaatcatgtggaggctgtgttcagctgcctgacaggg
aggaggattggagaggcttgcaggctggcacagcaggcaggcaaccaccggcttgccctg
ctcctgtcccagctggtgggcagccagcccacacgggacctgctcaccatacagctggtg
gactggcacaggctgcaggcagactgcttcatcccggaggagcgcctgcgcatcttcgct
ctgctggctgggaagcctgtgtggcagttgtctgagagaaccagcatcaatgtgtgctca
cagctggactggaagcgctgcgtggccatccacctctggtacctcctgcctccaacagct
tctatctcccaggcacttgccatgtatgaggcagcgtttcagaccacatcagagtctgag
aaatacgcctgctgccccctgcctccttacctggaaggctctggttgtgagattgaagaa
gatgataatgcaggaagacctctcagagatgtctgtttccatttgttaaagctctacagc
gacaggcactacgatctggaccagctgctggatcccaggagcatcacatctgacccggtg
gactatcgcctcagctggcacctgtgggaggtgctccgtgccctcaattacagccacctg
agcaggcaggggcagggcgtgctgaatgccagctatgctgcccagctggagagcgaaggc
ctgtgggagtgggctgtgtttgtggtgctgcatgagcccaatacccacatacgtgagaag
gccgtgcgtgagctgctgggccggcactgcgctctgtgcgagacccccgagtcgtgggcc
aaggagaccttcctgacacagcggctctgcgtccctgcagagtggattcatgaagcaaag
gctgttcgagcccgcatggagggcgacaagcataaagaagccttgttcctgttcaaagcc
gggcactggaaccagtgccacaagttggttgtgcggcacctcgcatcaggtgagccagga
accatttgtcccattctcttttga
DBGET
integrated database retrieval system
