Phasianus colchicus (Ring-necked pheasant): 116233131
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Entry
116233131 CDS
T07365
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcoc03016
]
116233131 (TARBP1)
03036 Chromosome and associated proteins [BR:
pcoc03036
]
116233131 (TARBP1)
Enzymes [BR:
pcoc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
116233131 (TARBP1)
Transfer RNA biogenesis [BR:
pcoc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
116233131 (TARBP1)
Chromosome and associated proteins [BR:
pcoc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
116233131 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
RVT_1
Motif
Other DBs
NCBI-GeneID:
116233131
NCBI-ProteinID:
XP_031455706
Ensembl:
ENSPCLG00000000490
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
MSGAPQGSVLGSVLFNIFMDDLNKGIQCTLSKYAGYTELSPQVTIRLKLDGRTCYRHDRQ
AALAPTHGDTAPPLSPQLGAAIGSGARRPLGPARACAERRGEAPPPAMEVVLADALLARG
GDPGELLRAVCAPLSADRAEALRLLLQRLAAGGPRGEAEGEALRRAAWEVALERCRPLLR
LGEGAAGGAERLRLGRAARGALRHCVQLCGAPLAARLARDALAELAGGGPGAEAAVEALA
AAAPRLEEPALVARCAAVALALVREEGEGEAAAALVAGRLLPALGGNAPALGRVWDGLLG
GGPAPRAGRALLALSALADALLPPRGPGAAADARLCPRFWRLVQEGLTERDGLCRKRARY
LLKRAVDLSGGQAACLRCPTDGPDESSLFWWSAEENEKLLQFWETYILIMETLEGNQIHV
IKPVLPKLNSLYELAISGEEGCWLFHPSWHMCIYKRMFESENKSLTKEGVLHFLELYETK
HLPNSLGFSEFVIGPLMDALSESSLYSRTPSQLMGACPPLGMRLQKFLATYLMLLPEEEK
GGFLLKFIQKMTNRHWCAVPILFLSMALAHIPACKVLGTDGLHALRDVLQCTMITHQILL
RGAAQCYLLQTAMHLTDVEKVSLPEVASFLLSLRPEESLRRDTALWMELCSWLQVNDRCF
GKSVCSDFEHQEISSLCLYASSLVREYLKTPASEGENCSMPDWFEAKLVATMILLAADVE
RMRNKSSGKSNIKWIELEAFLNPLLDVLMKLGSNAYIPTLKTDKSLQLLLKLLQTRSLKC
SNTQDDEVLFFIWKSLVTPVESVLEFILRRLTANELSTVGDLDRCDLYLALIPEIVNLCL
QLSSKKLTTVKKFISSLTNASIRNFWETNSAEELKLKEQIKKVTSIASLTAVCELVDQKP
EAHLEDLPSVDALKRFTAFSQFNEVLKKPSYIEEKSGLCEEASQGWGRIVARYVRDQWIC
LCFALNKLPMLAQEYEEGTSELLLTAERSKEILESALEALTILPSDQVLPVFDCMKVLVP
KLLNLQESLCIEAFDLAWKIISSLSNTQLIFWSNLKAFVRFIFDNEVLAAASANGPAYAK
IKEIILKLIDMSTTKTGVFNVVLSHCCQSWILPTCDNRSAVRNPFLNAGNYCELIIEGCV
FGTVFRRDQRLIQDVHAFIENLGENCAANVVTESTNRDDHYVRICAIKFLCLLDGSNILH
KSFMEDIVIKLLEKDELVSRSRTRYYANSLQHRIKNRVWQTLLVLLPKLEQNFLCGILDK
VFQAGFGNNQASVKYFIEWVVILSLHKYPQFLNKFWDCFCYDEEKLKTSICTFLSVLSHF
DTILQNTSEKKPILKKALLVVLQWCFNHNFSVRLYALVALKKIWGMCRMLDVEEFEALTP
VIESSLQQVENMHGTGNARRNWQRIQDHFFFAAFHPLEDYNLETIFCTLPRLSEVAEDEW
ISLCKFERFTDIPLPPAFQWYRSRAELLDLKPSDWSQQDTGSSSLDTDGQTEWTDVQKKI
IPWKHSTPSSDLEMVLQDRAAKLGKSNSRLIVVASLIDKPTNLGGLCRTSEIFGASALVV
GSLHYVQDKQFQHLSVSAEQWLPLVEVKPSQLVDYLQQKKTEGYTAIGVEQTAKSYDLTE
YCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQVI
KHKQQK
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgctccccagggatcagtcttggggtctgtcctgtttaatatctttatggat
gatctgaacaaagggattcagtgcaccctcagtaagtatgcaggttacactgagttgtct
ccacaagtgacgatacgcctgaagctcgacggccgcacttgctatcgacacgaccggcaa
gccgccctggcgccgacccacggggacaccgcccctcccctcagtcctcagctgggcgcg
gccatcgggagcggcgcacgccgcccgctgggccccgcccgcgcctgcgcagagaggcgc
ggagaggctcccccgcccgcgatggaggtggtgctggccgacgcgctgctcgcccgcggc
ggggatcccggcgagctgctgcgggccgtgtgcgcgccgctctccgccgatcgcgcggag
gcgctgcgcctcctgctccagcgcctggccgccggcgggccgcggggcgaggcggaaggc
gaggcgctgcggcgggccgcctgggaggtggcgctggagcggtgccggccgctgctgcgc
ctcggggagggggcggcgggcggcgcggagcggctgcggctgggtcgggcggcgcggggc
gcgctgcggcactgcgtgcagctgtgcggggcgccgctggccgcccgtctcgcccgcgac
gcgctggccgagctggcgggcggcgggccgggcgcggaggcggcggtggaagcgctggcg
gcggcggcgccgcggctggaggagccggcgctggtggcgcgctgcgcggcggtcgcgctg
gcgctggtgcgagaggagggcgaaggcgaggcggcggccgcgctggtggccgggcggctg
ctgccggcgctgggcggcaacgcgccggcgctgggacgcgtgtgggacgggctgctgggc
ggcgggccggcgccgcgggccgggcgggcgctactggcgctgagcgcgctggccgacgcg
ctgctgccgccgcggggcccgggggcggcggcggacgcgcggctgtgtcctcgcttctgg
aggctggtgcaggaggggctgaccgagcgggacgggctgtgccggaagagggcccgctac
ctgctgaagcgcgccgtggacctcagcggcggtcaggccgcctgcctgcgctgccctacg
gacggcccggacgaatcaagtctgttttggtggtctgctgaggagaatgagaaactcctg
cagttctgggaaacttacattttgatcatggaaactttggaaggaaaccagatccatgtc
ataaagccagtattacctaaactaaacagtttatatgagcttgctatatcaggagaagaa
ggttgttggttgtttcacccatcgtggcacatgtgcatctataaaagaatgtttgagagt
gagaataaatcattgacaaaggaaggggttcttcattttttggagctttatgaaacaaag
catcttccaaattcacttggtttttcagagtttgttattggaccattaatggatgccctc
tcagaaagttccctttatagtaggacaccaagtcagctaatgggagcctgtcctcctttg
ggaatgaggcttcagaaatttttggctacttatctgatgcttcttccagaagaagaaaaa
ggtggtttcctgttaaagtttattcagaagatgacaaatcggcattggtgtgctgttccc
attttgtttctttctatggctctagcacacatccctgcatgtaaagtactgggcactgat
ggacttcatgctttaagagatgtcctccagtgtaccatgattacacatcagattttgttg
cgtggagctgctcagtgctatcttcttcaaacagccatgcatttgacagatgtggagaaa
gtgtctcttccagaggttgccagctttcttttgtcccttagaccagaggagtccctacgg
agagatactgcgttatggatggagctttgcagttggctgcaagtgaatgacagatgcttt
gggaagtctgtgtgctctgattttgagcatcaggagatctcatcactgtgtttgtatgcg
agcagtcttgtgagagagtaccttaagactcctgcatctgaaggagaaaattgctctatg
cctgactggtttgaagctaagcttgttgcaacaatgattctgttggctgctgatgtggaa
cggatgaggaataaatccagtggaaaaagcaacataaaatggattgaactagaggctttc
ttgaaccctcttctggatgtcttgatgaaacttggcagtaatgcttacataccaacactg
aaaacagataaaagcctacagcttctcttgaagttattgcagacccgttcgttaaaatgt
tccaatacacaagatgatgaggtattgttttttatctggaaatctctagtaacacctgtg
gagagtgttcttgaatttatactccggcggcttactgcaaatgagttaagtacggttggt
gacctggatcgttgtgacctatacttagccttaattccagagattgtgaatctgtgcttg
caactcagctcaaaaaagttgacaactgtcaagaaattcatctcatccctgactaatgcc
tctattcgtaatttttgggaaacaaattctgcagaggagctgaagcttaaggaacaaata
aaaaaagtaactagtatagcctcactcacagcagtttgtgagctagtggatcagaaacct
gaagcacaccttgaagatttgccttctgtggatgctttaaagagatttactgccttttcc
caatttaatgaagtattaaagaaaccgtcttacattgaagaaaaaagtggcttatgtgag
gaagcatctcagggatggggaagaattgttgcacgctatgtacgtgaccagtggatttgc
ctgtgttttgctttaaataaacttccaatgttggctcaagagtatgaagaaggaacttca
gaactgttgttaactgctgaaagatcaaaagaaattctagaatctgcattggaagcccta
actattcttccttcagaccaagttttacctgtgtttgactgcatgaaagtccttgttccc
aagcttctgaacttacaggaatctctctgcatagaagcattcgatttggcttggaaaatc
atatcctctttgagcaatacacagctaatattttggtctaatctgaaagcttttgttcgg
ttcatctttgataatgaggttctagctgctgcaagtgcaaacggcccagcgtatgccaag
ataaaagagataatactcaagctcatagatatgtccactacaaaaactggagtcttcaac
gtagtccttagtcactgttgtcaatcatggatacttcccacttgcgataacagaagtgct
gtgagaaatcctttcttaaatgctgggaattactgtgaacttatcatcgagggctgtgtc
ttcggaactgtatttaggagagatcaaagacttattcaggatgtgcatgccttcatagaa
aatcttggagaaaattgtgcagcaaatgttgttactgaaagtacaaaccgagatgatcac
tatgtacggatttgtgctattaaatttctgtgcttgttggatggatcgaatatcttgcat
aagagctttatggaagacattgtcatcaaactacttgagaaagatgagctggtgtccaga
tctagaacacgttattatgcaaactcattacagcatagaattaaaaaccgggtatggcaa
acactcctagttcttcttccaaagctggaacagaatttcttgtgtggaatccttgacaaa
gtctttcaggctggatttggtaacaatcaagcatctgtgaagtacttcatagaatgggtt
gttatcttgagtctacataaatacccccaatttctcaataaattctgggattgcttctgc
tatgatgaagaaaagcttaaaacaagcatctgtacatttttatcagtgttatcacatttt
gacaccattcttcaaaatacctcagagaagaagccaattctgaagaaagccctcttggta
gttctgcagtggtgtttcaaccataattttagtgtccgactttatgcactggttgcactt
aaaaaaatctggggtatgtgcagaatgttggatgtggaagaatttgaagccctgacacca
gttattgaatcgagccttcaacaagtggaaaacatgcatggcacagggaatgctagaaga
aactggcagagaatccaggatcatttcttctttgcagcatttcatccactcgaggactat
aatctagagacgatattttgtactcttccacgcctttcagaagttgctgaggatgaatgg
atctctctctgtaaatttgagaggtttactgacattcctttgccgccagcatttcagtgg
tatcgttctcgagctgaacttcttgatctaaaaccaagtgactggtctcagcaagacaca
ggttcaagttcacttgacacagatggccaaacagagtggactgatgttcagaaaaagatc
ataccctggaaacacagtactcctagttcagatctggaaatggtattgcaggaccgtgct
gctaagcttggtaaatcaaacagcagactgattgtggtggcttcacttattgataaacct
accaatttaggaggtttatgccgtacaagtgagatatttggggcatctgcactagttgtt
ggcagccttcattacgtacaggacaaacagttccagcatctgagtgtttctgcagagcag
tggctcccccttgtcgaggtgaaaccttctcagcttgttgattatttacagcaaaagaaa
acagaaggctacactgctattggagtggagcagacagccaaaagttatgatcttacagaa
tattgctttccagagaaatcactgttattgctggggaatgaacatgaaggaatcccagca
aacctgattcaccacctggatgtctgtgtggaaattcctcagcaggggattattcggtca
ctcaatgttcatgtaagtggagctctgctgatctgggaatacacaaggcaacaagtgatc
aagcacaaacaacaaaaataa
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integrated database retrieval system
