Phasianus colchicus (Ring-necked pheasant): 116233644
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Entry
116233644 CDS
T07365
Symbol
NR1D1
Name
(RefSeq) nuclear receptor subfamily 1 group D member 1 isoform X1
KO
K03728
nuclear receptor subfamily 1 group D member 1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoc03000
]
116233644 (NR1D1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pcoc03310
]
116233644 (NR1D1)
Transcription factors [BR:
pcoc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116233644 (NR1D1)
Nuclear receptors [BR:
pcoc03310
]
1. Thyroid hormone like
1D. Rev-Erb
116233644 (NR1D1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116233644
NCBI-ProteinID:
XP_031456533
Ensembl:
ENSPCLG00000009841
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MAAPDTGSTGGVISYVGSVGSPPRVSPVPLCSEGSAGGPQPVPLYFPPSPTGSLQDSRPY
GGGPLPPRDDGSPSSSSSSSSSSSSSSPYGPSAAFPGAVAVAADERRRGSPNKSGTNVTK
LNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIVRINRNR
CQQCRFKKCLLVGMSRDAVRFGRIPKREKQRMLAEMQSAMSVGSAVPGGAPLGEGPVPVG
GRPLPPGPPPLAPPACFSQFPQQLTPPRSPSPGGATEDVIAQVAKAHREIFVYAHDKLGP
PPSCDGAQPRWDAAPPAWTPAPLEPRLCPPPTAVYPDPTARGCAWPRGPKDVLPACPMNS
HPAGRSGRSVQEIWEDFSLSFTPAVREVVEFAKHIPGFQALSQHDQVTLLKAGTFEVRPG
LPSHGAAPLGTARCCTSQHGACGVARCPVTLRCPVVLHGVPQPIAGLHIPALHCTALHSA
PSVARRSVLQAMQQLSTMQRSTARCLVSERGATWRRTVLRVPAQSPAAPRDAARHRVVSR
GARCPNSPPPPFAAPRTPARCPAELHDAVLLPCAAGADGALRLAVQREGADGDVHEPHQI
QPGGAVGYGHGRPAQLHVRVQREAQRAAAQRRGAGAVHRRRAGVGRLVPRWSRAGCARLC
ARVCVCVCARVGGSRCRSPPR
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggccgccccagataccggcagcacaggcggtgtcatcagctacgtgggctccgtgggg
tcccccccacgcgtcagccccgtcccgctctgcagcgaaggctccgccggcggccctcag
cccgtccccctctacttccccccgtcgcccaccggctccctgcaggactcccggccctac
gggggcggcccgctgcccccccgcgatgacggctcgccttcctcctcctcctcatcctcc
tcttcctcctcctcctcctcaccctacggcccctcggccgcattccccggcgcagtggcg
gtggcagcggatgagcgacgccgcggttcgcccaataagagcggcaccaatgtcaccaag
ctgaacggcatggtgctgctctgcaaggtctgcggtgacgtcgcctccggcttccactac
ggtgtgcacgcctgcgagggctgcaaggggttcttccgccgcagcatccagcagaacatc
cagtacaagaagtgcctgaagaatgagaactgctccatcgttcgcatcaaccgcaaccgc
tgccagcagtgccgcttcaagaagtgcctgctggtcggcatgtcccgcgacgccgtgcgc
ttcgggcgcatccccaagcgggagaagcagcggatgttggcggagatgcagagcgccatg
agcgtgggcagcgccgtgccgggaggggcacctctgggcgagggacccgttcccgtcggg
ggccgcccgctgccccccggccccccgccgctcgccccccccgcctgcttctcccagttc
ccgcagcagttgacccccccccgctcgcccagccccgggggggccaccgaggacgtcatc
gctcaggtggccaaagcgcaccgggagatcttcgtctacgcgcacgacaagctgggcccc
cccccgagctgcgacggcgcccagccgcgctgggacgcggccccccccgcctggaccccc
gcccccctcgaaccccggctctgccccccccccaccgccgtataccccgaccccacagcg
cggggctgcgcgtggcctcgcggccccaaggacgtgctgccggcctgccccatgaacagc
cacccggcggggcgcagcgggcgctcggtgcaggagatctgggaggatttctcgctcagc
ttcacgcccgccgtccgcgaggtggtcgaattcgccaagcacattcccggcttccaggcg
ctgtcccagcatgaccaggtcaccctgctcaaagccggcaccttcgaggtacgtcccggg
ctcccgtcgcacggcgcagcgcccctcggcactgcacggtgctgcacatcccagcacggt
gcctgcggcgttgcgcggtgccccgtgaccttgcggtgccccgtagtgctgcacggtgtc
ccacagcccatcgcggggctccacatcccggcactgcactgcacggcactgcacagtgcc
cccagcgttgcacggcgctcggtgctgcaggcgatgcagcagctcagcacgatgcagcgc
agcaccgcgcggtgcctcgtatccgagcgcggtgccacgtggcgtcgcacggtgctccgt
gtcccagcgcagagccccgcagcaccgcgtgacgccgcacggcaccgcgtggtgtcgcgc
ggggcgcggtgtcctaacagccccccgcctcccttcgcagccccccgcaccccagcacgg
tgccctgcagagctgcacgatgccgtgctgttgccatgtgctgcaggtgctgatggtgcg
cttcgcctcgctgttcaacgtgaaggagcagacggtgacgttcatgagccgcaccaaata
cagcctggaggagctgtggggtatgggcatgggcgacctgctcagctccatgttcgagtt
cagcgagaagctcagcgcgctgcagctcagcgacgaggagctggggctgttcaccgccgt
cgtgctggtgtcggcaggttggtgccgcgatggagccgggcagggtgtgcgcgtttgtgc
gcgcgtgtgtgtgtgtgcgtgtgtgcgcgtgttggggggtcccggtgccgttcccccccg
cggtga
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