Phasianus colchicus (Ring-necked pheasant): 116234005
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Entry
116234005 CDS
T07365
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2
KO
K11101
patched 2
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116234005 (PTCH2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
Motif
Other DBs
NCBI-GeneID:
116234005
NCBI-ProteinID:
XP_031457133
Ensembl:
ENSPCLG00000004593
LinkDB
All DBs
Position
Unknown
AA seq
1455 aa
AA seq
DB search
MGAAAAAAANGSGGGGAAPAPPAPALPFRGAAGGRRPRALRTGTAAPPHTRALRALRAHG
GRRRLARPHITGLRAPHSRPAMPAEPPRSAPPRAAAAALRKALPEVSGEHRPLRPAPRRA
GPPAERRRSPQGRGAPLWLRARFQALLFALGCRIQRHCGKVLFVGLLLFGALAVGLRVAS
VETDIEHLWVEAGSRVSQELRYTKEKLGEESVYTSQMLIQTPKREGENILTQEALQLHLE
AALAASKVQVSLYGKSWDLNKICYKSGVPIIENGMIERMIEKLFPCVILTPLDCFWEGAK
LQGGSAYLPGRPDIQWSNLDPLQLMEELGQFTSLEGFKELLDKAEVGQAYMERPCLDPQD
PQCPSSAPNKQSQQSPDIPAELSGGCHGFSRKFMRWQEELILGGTTKDSQGKLLSAEALQ
TMFLLMSPRQLFEHFKDDYEIHDISWSEEKAGAILEAWQRKFVELAQDSIPPNATQNIHA
FSTTTLNDIMKSFSDVSAIRVAGGYLLMLAYACVTMLRWDCSKSQGAVGLAGVLLVALSV
ASGLGLCSLLGISFNAATTQVLPFLALGIGVDDMFLLAHAFTETSQHIPFKERTGECLRR
TGTSVALTSVSNMIAFFMAALVPIPALRAFSLQAAVVVVFNFAMVLFIFPAILSLDLYRR
EKRRLDILCCFYSPCSSRVIQIQPQELADANDNHASHPSPYGHPGVATSTQITTTVQAFT
QCDPSGHHIVTVLPPTSQVCTSPAVLLPPADPLGSQVFTPSSSTRDLLAQLDEAKGGREC
VPLPLCRWSLSDFAREKYAPLLLRTQTKVVVVILFLALLGLSLYGTTMVHDGLYLTDIVP
RDTKAHAFISAQFKYFSFYNMFIVTKGGFHYPGAQAALLSLHQAFSTVKYVVREGNHDLP
KMWLHYFQDWLRGLQATFDRDWQAGRITYDSYRNGSEDGALAYKLLIQTGNKKEPFNFNQ
LTTRRLVDENGIIPPDTFYICLTVWASNDPLGFAASQANFYPPPPEWIHDKYDTTGENLR
IPAAQPLEFAQFPFYLSGLRRTADFVEAIESVRAICQEAAQRHGVLSYPSGYPFLFWEQY
IGLRHWFLLAISILLACTFLVCALLLLNPWTAGIIVSILAMMAVELFGIMGLMGIKLSAI
PVVILIASVGIGVEFTVHVALGFLTAVGSRNVRSAAALEHTFAPVMDGAVSTLLGVLMLA
SSEFDFIMRYFFAVLTILTLLGLLNGLVLLPVLLSVIGPPSEASPVDNGPRLPPTEPVPP
CPGGLYIRRAPAWPAAFTDTSDTECYGDSVGPGSPQGPFIVPPAPAHILLEAGKDPSFPR
ITVLKPYKDSPEVQGKKEQPIPQPASSLPFGEPCPTLSRDYPHPTALPRPGQPCSSSAWP
APRAPLPAYSTHLQGPAGSYTTVTATASVTVALHPTLPGSYPSFGTETDSVEEPSTMPDS
FEMQSLGRHGAGTRR
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctgccgcggcggcggcggccaatgggagcggcggcggcggcgcggccccggcg
ccccccgcccccgccctcccctttagaggcgcggcgggcggccgccggcccagagccctc
cgcaccggcaccgccgctccgccgcacacccgcgccctccgcgccctccgcgcccatggg
ggccgacgccgcctcgctcggccccacataacggggctgcgcgccccgcacagccgcccc
gccatgccggccgagcccccccgctccgctcctccgcgagccgccgccgccgccctccgc
aaagcgctgcccgaggtaagcggcgagcatcgcccgctccgccccgcaccgcgccgtgcg
ggtccccccgctgagcgccgccgctccccgcagggccgcggggccccgctgtggctgcgg
gcccgcttccaggcgctgctcttcgcgctgggctgccggatccagcggcactgcgggaag
gtgctgttcgtggggctgctgctgttcggggcgctggccgtggggctgcgggtggcctcc
gtcgagacggacatcgagcacctctgggtggaagcgggcagccgtgtcagccaggagctc
cgctacacgaaggagaagctgggcgaggagtccgtctacacgtcccagatgctgatccag
accccgaaacgcgaaggagagaacatcctgacgcaggaggccctgcagctccacctcgag
gcggccttggctgccagcaaagtgcaagtctcgctgtacggaaaatcgtgggatttgaac
aaaatctgctacaagtcaggcgtccccatcattgaaaatggaatgatcgagaggatgatc
gagaagctgttcccctgcgtgatcctgacaccgctggactgcttctgggaaggggccaag
ctgcagggaggctcagcctacctcccgggccgtcctgatatccagtggagcaatttggac
cctctgcagctgatggaggagctgggacagttcacatccctagaaggcttcaaggagctg
ctggataaggctgaggtggggcaggcttatatggagcgaccctgcctggacccccaggac
cctcagtgcccctccagcgcccccaacaagcagagccagcagagccccgacatcccggcg
gagctctctgggggctgccatggcttctccaggaagttcatgcgctggcaggaggagctg
attttgggcggcacaaccaaagactcccagggcaagctgctaagtgccgaggccctgcag
acaatgttccttctcatgagccctcggcagctgtttgagcacttcaaggatgactatgag
atccatgacatcagctggagtgaggagaaagcaggtgctatcctggaggcctggcagagg
aaattcgtggagctggcgcaggactccatcccacccaatgccacacagaacatccatgcc
ttctccaccaccacactcaatgacatcatgaagtccttctctgacgtcagtgccatcagg
gtggctggaggatacctcctcatgctggcctacgcctgtgtcaccatgctgcgctgggac
tgctccaagtcacagggcgccgtgggcctggctggggtcctcctggtggccctctctgtg
gcctctggcttaggactctgctcactgctcggtatctccttcaatgcagccaccacacag
gtactgcccttcctggcccttggcattggtgtggatgacatgttcctcctggctcatgcc
ttcactgagaccagccagcacatccccttcaaagagcggacaggagagtgcctgcggcgc
acggggaccagcgtggctcttacctctgtcagcaacatgattgccttcttcatggctgcc
ctggtgcccatccctgccctgcgtgccttctcactccaggcagcagtggtggtggtgttc
aacttcgccatggtgctgttcatcttccctgccatactgagcctggacctgtatcggcgg
gagaagcgccgcctcgacatcctctgctgcttctacagtccttgctcctcacgggtcatc
cagatccaaccccaggagttggccgatgccaacgacaaccatgcctcccacccatccccc
tacggccaccccggcgtggccaccagcactcagatcaccaccaccgtgcaggccttcacc
cagtgcgacccctcgggccaccacatcgtcaccgtgctgccacccacctcccaggtgtgc
acctcacccgccgtgctgctgccgcctgccgacccattgggctcgcaggtcttcaccccc
tccagctccacacgggacctgctggcccagctggatgaggctaagggcgggcgcgagtgc
gtgccactgcccttgtgccgctggagcctctccgactttgcccgtgagaagtacgccccg
ctcctgctgcggacccagaccaaggtggtggtggtgatcctcttcttggcgctgttagga
ttgagcctctacggcaccaccatggtgcatgacgggctctacctgacagacattgtgcca
cgggacaccaaggctcacgccttcatctcagcccagttcaagtacttctccttctacaac
atgttcatcgtcaccaagggtggcttccactacccgggcgcccaggccgccctgctcagc
ctgcaccaggcttttagcactgtcaagtacgtggtgcgtgaaggcaaccatgacctgccc
aagatgtggctccattacttccaggactggctgcgagggctccaggccaccttcgacagg
gactggcaagctggccgcatcacctatgatagctatcgcaatggctctgaggatggggca
ctggcctacaagctcctcatccagactggcaataagaaggagccattcaacttcaaccag
ctgactacacggcgattggtggatgagaatggcatcatccccccagacaccttctacatc
tgcctgacggtgtgggccagcaacgaccccctgggcttcgctgcctcccaggccaacttc
tacccaccaccacctgagtggatccatgacaagtacgacactacaggcgagaacctccga
atcccagcagcccagccgctggagttcgcccagttccccttctacctgagcgggttgcgt
cgcacagccgacttcgtcgaggcaattgagagcgtgcgggccatctgccaggaggcggcc
cagcgccatggggtgctgagctaccccagcggctaccccttcctcttctgggagcaatac
atcggcctgcgccactggttcctgttggccatcagcatcctgctggcctgcacctttctc
gtctgcgccctgctgctgctcaacccctggacggccggtatcatcgtctccatcctggcc
atgatggcggtggaactgttcggcattatggggctgatgggcatcaagctgagtgccatc
cctgtcgtcatcctcatcgcttcagttggcattggcgtggagttcactgtccacgtggcc
ctgggcttccttacagcagttgggagcaggaacgtgcgctcagctgccgccttggagcac
acctttgcccctgtgatggacggtgctgtctctaccctcctgggcgtcctcatgttggcc
agctctgagttcgacttcatcatgaggtacttctttgcggtgctcaccatcctgacactc
ctggggctgctcaatgggttggtgctgctgcctgtcctgctatcagtcatcgggccaccc
tctgaggcatctcctgtggataatggcccccgcctgccccctacagagccagtgcctcca
tgccctgggggtctgtacatccgccgtgcccctgcctggcccgctgccttcactgatacc
tcagacacagagtgctatggcgacagtgtggggccaggcagcccccagggaccctttatt
gtgccacctgccccggcacacattctactggaggctggcaaggaccccagcttcccccgc
atcactgtgctgaagccctacaaggacagcccagaggtccaggggaagaaggagcagccc
atcccccagcctgcatcttcattgcctttcggggagccgtgccccacactgtccagagac
tacccgcaccccacagcactgcctcggccgggtcagccctgctcctccagcgcctggcca
gcccctcgggcccccctgccagcctacagcacccacctgcagggccctgctggcagctac
accacagtcacagccactgcttcagtgacggtggccctgcaccccacgctgcctggctcc
taccccagttttggcaccgaaacggacagtgtggaggagcccagcaccatgcctgactcc
ttcgagatgcaaagcctgggacgccacggggcaggcacccggcgctag
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