Phasianus colchicus (Ring-necked pheasant): 116234136
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Entry
116234136 CDS
T07365
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116234136 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcoc03041
]
116234136 (PRPF4)
Spliceosome [BR:
pcoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116234136 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_Aladin
NBCH_WD40
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
116234136
NCBI-ProteinID:
XP_031457365
Ensembl:
ENSPCLG00000012750
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MASVRAPVARGGARPAPVRAPAPPEPMKSKPSEEGDAPPAKRAPIFYGSLEEKERERLAK
GESGMLGKEGMKAALEAGNINISSGEVFDLEDHMSERQAEVLAEFERRKRARQINVSTDD
SEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSKEEYQQT
WYHEGPRSLKTARLWLANYSLPRAVKRLEEARLLKEIPEATRTSQRQELHKSLRSLNNFC
SQIGDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKA
TVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDH
SWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG
HLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFL
LTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgtgcgggcaccggtggcgcgcggcggggctcggccagctcctgtaagggcc
cccgcgccgcctgagcccatgaagagcaaaccatcagaggagggcgatgctccccctgcc
aagagagcacccatcttctatggcagcctggaggagaaggagcgggagcggctggcgaag
ggggagtctgggatgctgggaaaggaaggaatgaaggccgccctcgaggccggcaacatc
aacatcagcagtggtgaggtctttgatttggaggatcacatgagcgagcggcaggcagaa
gtcttggctgagtttgagcgcaggaagcgagcccggcaaatcaacgtctccacggatgac
tctgaagtgaaagcctgcctgcgagcccttggggagcccataacgctctttggagaaggt
cctgcggagaggagggagagattaagaaatatcctttcagtggtcggcacagatgcatta
aaaaagacgaggaaagatgatgacaggtctaaaaagtctaaagaagagtatcagcaaacg
tggtaccatgaaggaccacgtagtctgaaaacagcaaggctgtggcttgcgaactattcg
cttcccagggcagtgaaacgtctagaagaagcccggctgctcaaagagattccagaggca
accaggacatcacagagacaagaactacacaaatctctacgatccttgaataacttctgt
agtcagattggggatgatcgcccgctgtcctactgccacttcagccccaattccaaactc
ttggctactgcctgttggagtggactgtgcaagctgtggtctgtgcctgactgcaacctt
gttcacaccttacgaggacatagcaccaatgtaggagcaatagtcttccatcccaaagcc
actgtctccctcgacaagaaggacgttaacttggcctcatgtgcagctgatggttctgtc
aaactctggagccttgaaagtgatgagccagtggcagatattgaaggacacagcatgaga
gtggcacgtgtgatgtggcacccctctgggaggttcctgggcactacttgttatgatcac
tcatggcgcttgtgggacttggaagctcaggaagagattcttcatcaggaggggcacagc
aaaggggtctatgacatcgcctttcacacggatgggtctcttgctgggactggtggactg
gatgcttttggccgagtgtgggatttgcgcaccggacgttgtatcatgtttctggaaggc
cacctgaaggagatctatggacttaacttctccccaaatggataccacgttgcaactggc
agtggtgacaatacttgcaaggtatgggacctccgccagaggaagtgcatctacaccatt
cctgcccatcagaacctggtgactggggtgaaatttgaacccaatcatggtaacttcctg
ctgacaggcgcttatgataacactgcaaagatctggactcaccctggctggtcccctctg
aaaacactggctggtcatgagggaaaggtgatgggactggatatctccctcgatggccag
ctgatagcaacatgctcctatgacagaaccttcaagttgtggacagcagagtag
DBGET
integrated database retrieval system
