Phasianus colchicus (Ring-necked pheasant): 116234326
Help
Entry
116234326 CDS
T07365
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116234326 (NOTCH1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
Gurken_M
cEGF
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
116234326
NCBI-ProteinID:
XP_031457705
Ensembl:
ENSPCLG00000013198
UniProt:
A0A669QQ28
LinkDB
All DBs
Position
Unknown
AA seq
2550 aa
AA seq
DB search
MKRLLATGLLLALLPAPTRGVRCTQLAESCLNGGKCETFLNGTEVCQCSSAHMGERCQLP
NPCLSSPCKNAGTCIPLVRGSTADYSCVCRLGFTDELCLTPLDNACLNNPCRNGGTCDLV
TLSEYKCRCPPGWSGKTCQQADPCASNPCANGGQCVPFEAHYVCRCTAGFHGANCKQDVN
ECNISPPVCKNGGSCTNEVGTYQCSCKPAYTGQNCEHLYVPCNPSPCQNGGTCRQTGDTT
YDCTCLPGFAGQNCEENIDDCPGNNCRNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFQGATCHDRVASFYCE
CPHGRTGLLCHLDDACISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGA
NPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGNCLDKINEFHCECPTGFNGHLCQFDIDECASTPCKNG
AKCVDGPNTYSCECSEGFSGIHCEIDIDECNPDPCHYGTCKDSIAAFTCLCQPGYTGHRC
DININECQSQPCRNGGTCQDRDNAYNCLCLKGTTGPNCEINLDDCASNPCDYGKCIDKIN
GYECTCEPGYTGRMCNINIDECASNPCHNGGTCKDGINGFTCLCPEGFHDPKCLSEVNEC
NSNPCIHGRCHDGLNGYRCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTSGYICTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYTCNCLLPYTGATCEDVLAPCAGGPCKN
GGECRESEDYKRFSCSCPPGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCLCRVGFA
GRNCDTDIDDCQPNPCHNGGSCSDGIGTFFCECLAGFRGLKCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCLCPSGFTGSYCEH
NINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNL
YRCECNSGWTGLYCDVPSVSCEVAAKQQGIDVAHLCRNSGLCVDSGNTHFCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCTDRVGGYSCICPPGFV
GERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKGKPCRNGG
TCAVASNTGRGFICKCPPGFVGATCENDSHTCGTLHCLNGGTCISMHKSSKCVCAAAFTG
PECQYPASSPCISNPCYNGGTCEFLSDASPYYHCNCPANFNGLNCHILDFDFQGGFGQDI
IPPKIEEKCEIAVCASYAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYF
NDGKCDSQCNNAGCLYDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDGLD
CANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNAKGEYMIFPYY
GNEEELKKHYIKRSAEDWADMSSAVINKVKSSLYSRAGRRQKRELDQMDIRGSIVYLEID
NRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPARNSQLYPMYVVV
AALVLLAFIGVGVLVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNAS
DGTLMDDNQNEWGDEETLDTKKFRFEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSMAP
TPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGASL
HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINCHADVNAVDDLGKSALHWAAAVNN
VEAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI
AQERMHHDIVRLLDEYNLVRSPPLHSGPLGAPTLSPPLCSPSSYIGNLKPAVQGKKARKP
STKGLSCNGKDSKDLKARRKKSQDGKGCLLDNSSVLSPVDSLESPHGYLSDVASPPLMTS
PFQQSPSMPLNHLPGMPDAHMSINHLNMAGKQEMALGGSGRMAFEAVPPRLSHLPVSSPS
TAMSNAPMSFSVGGAAGLSGQCDWLSRLQSGMVQNQYSAMRGGMQPGTHQQAQNLQHGMM
SSLHNGLPSTSLSQMMSYQAMPSTRLASQPHLLQNQQMQQMQQPGMQQPGMQPQPGMQQP
QQQPQQQPQPQQHHNPGSNASGHMGQNFLGTELSQPDMQPVSSSAMAVHTILPQDSQLLP
TSLPSSLAQPMTTTQFLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQWSSSSP
HSNVSDWSEGISSPPTSMQSQMGHIPEAFK
NT seq
7653 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggctcttggccacggggctcctgctggccctgctgcccgccccgacgcgaggt
gtgcggtgcacgcagctggccgaatcctgcctcaacgggggcaagtgtgaaactttcctc
aatgggacagaagtgtgccagtgcagcagtgcccatatgggtgagcgatgccagctgccc
aacccctgcctcagctccccctgcaagaacgccggcacctgcatccctctggtgcgtggc
agcaccgccgactacagctgcgtctgccgcctgggcttcaccgacgagctctgcctgaca
cctctggacaacgcctgtctcaacaacccctgccgcaacgggggcacctgtgacctggtg
acactcagcgagtacaagtgccgctgcccgccggggtggtcaggtaaaacctgccagcag
gccgacccctgcgcctccaacccctgtgccaatgggggtcagtgcgtcccctttgaagcc
cactacgtctgccgctgtactgctggcttccacggggccaactgcaagcaggacgtgaat
gaatgcaacatctcaccacccgtctgcaagaatggtggcagctgcaccaacgaggtgggc
acctaccagtgctcctgcaagccagcctacaccgggcagaactgcgagcatctctatgtg
ccctgcaacccctcaccctgccagaacgggggcacatgccgccagactggggacaccacc
tacgattgcacctgtctgccagggttcgccgggcagaactgtgaggagaacatcgatgac
tgtccagggaacaactgcaggaatgggggcacctgcgtggatggcgtcaacacctacaac
tgccagtgcccgcccgagtggacaggtcagtactgcaccgaggatgtggatgagtgccag
ctgatgcccaatgcctgccagaatgggggcacctgccacaacaaccacggtggctacaac
tgcgtctgtgtcaatggctggacgggcgaggactgcagtgagaacatcgatgactgcgcc
atggccgcctgcttccagggggccacttgccacgaccgggtggcttccttctactgcgag
tgtccccatgggcgcacaggtttgctgtgccacctggatgacgcctgcatcagcaacccc
tgcaatgagggctccaactgtgataccaaccctgtcaatggcaaagccatctgcacgtgt
ccttcggggtacatggggccagcgtgcaaccaggacgtggatgagtgttcactgggagcc
aacccttgtgagcacgcagggaaatgcatcaacacccaggggtccttccagtgccagtgt
ctgcagggctactcaggaccccgctgtgagattgatgtcaatgagtgtctctccaacccc
tgccagaacgatgccacctgcttggaccagatcggggagttccagtgcatctgcatgcct
ggatatgagggcgtctactgtgaaatcaacacagacgagtgtgccagcagcccctgcctg
cacaatggcaactgcctggataagatcaacgagttccactgcgagtgtcccaccgggttc
aacgggcacctgtgccagttcgacatcgatgagtgcgccagcaccccctgcaagaatggg
gccaagtgcgtggatggccccaacacctacagctgcgagtgctctgaaggtttctcaggt
atacactgtgagatcgacattgatgagtgcaaccctgacccgtgccactatgggacctgc
aaggacagcatcgccgccttcacctgcctctgccagcctggctacacgggccaccgctgt
gacatcaacatcaatgagtgccagagccagccctgcagaaacggagggacctgtcaggac
agggacaacgcctacaactgcctgtgcctcaaggggaccacggggcccaactgcgagatc
aacctggatgactgcgccagcaacccctgtgactatggcaagtgcatcgacaagatcaat
ggctacgagtgcacctgtgagccggggtacacagggcgcatgtgcaacatcaacatcgat
gagtgtgccagcaacccgtgccacaatgggggcacttgcaaggacggcatcaatggcttc
acctgcctctgccccgagggcttccatgaccccaagtgcctgtctgaagtgaatgagtgc
aacagcaacccctgcatccacgggaggtgccacgacgggctgaacggttaccgctgtgat
tgcgacccaggctggagcgggacaaactgtgacatcaacaataatgagtgtgaatccaat
ccctgcatgaatggtggcacctgcaaggacatgaccagcggttacatctgcacctgcagg
gaagggttcagcggacccaactgccagaccaatatcaatgaatgtgcttccaacccctgc
ctgaaccaaggcacgtgcattgatgacgtggccggctatacctgcaactgcctcctgccc
tacacaggagccacctgtgaggacgtgctggccccctgcgccggcggcccctgcaagaac
ggcggcgagtgccgggagtcggaggactacaagaggttctcatgcagctgcccacccggc
tggcaaggccagacgtgcgagattgacatcaatgagtgtgtgaagagcccctgccgcaat
ggggccacgtgccagaacaccaacgggagctaccgctgcctgtgccgcgtgggcttcgca
gggcgcaactgtgacaccgacatcgatgactgccagcccaatccgtgccacaatggtggc
tcctgctcggatggcattggcacgttcttctgtgagtgcctggccggcttccgcgggctc
aagtgcgaggaggacatcaatgagtgtgccagcaacccctgcaagaatggggccaactgc
accgactgcgtcaacagctacacctgcacctgcccctccggcttcagcggcatccactgt
gagaacaacacacctgactgcactgagagctcctgcttcaatggggggacctgcgtggat
ggcatcaacaccttcacctgtctctgtccatccggcttcacgggcagctactgtgagcac
aacatcaacgagtgtgactccaagccctgcctgaatgggggcacgtgtcaggacagctac
gggacgtacaagtgcacctgtcctcaaggatacactgggctcaactgccagaacttggtg
cgctggtgtgactcctcaccctgcaaaaatgggggcaagtgctggcagaccaacaacctg
taccgctgcgagtgcaacagcggctggacggggctctactgtgatgtccccagcgtctcc
tgcgaggtggcagcaaagcagcaaggtatcgacgtcgctcatctctgcaggaactcaggg
ctctgtgtggacagtggcaacactcacttctgtcgctgccaggccggctacaccggcagc
tactgcgaggagcaggtggatgagtgctccccaaacccctgccagaacggagccacctgc
acggactacctggggggctattcctgtgagtgcgtggctggttatcatggagttaactgc
tcagaggagatcaatgagtgcttgtcccacccatgccagaatggaggaacttgtatcgat
ctcatcaatacctacaaatgctcctgccccagaggaactcaaggggtgcactgtgagatc
aatgtggatgactgcagccctttctttgatcctgtcaccttggggcccaagtgctttaac
aatggcaagtgcacggatcgggtaggtggctacagctgcatctgcccccctggctttgta
ggggagcgctgcgagggagacgtcaacgagtgcctctccaacccctgcgacgcgcgcggc
acccagaactgcgtgcagcgggtcaatgactacaaatgcgagtgccggcctggctacgca
gggcgtcgctgtgacactgtggtggatggctgcaagggcaaaccctgcaggaatggggga
acgtgtgctgtggccagcaacaccggccgtggcttcatctgcaagtgccctccgggcttt
gtgggtgccacctgtgagaacgactcccacacctgtgggaccctgcactgcctgaatggt
ggcacctgcatctccatgcacaagagctccaagtgcgtgtgtgcagcagccttcacgggc
ccagagtgccaatacccggccagcagcccctgcatctccaacccctgctacaacgggggc
acctgcgagttcctgagcgatgcctccccttactaccactgcaactgccctgccaacttc
aacggcctcaactgccacatccttgactttgatttccaaggcggcttcgggcaggacatc
atcccacccaaaattgaggagaagtgtgagatcgccgtttgcgcgagctatgctggcaat
aagatctgtgatgggaagtgcaacaaccacgcctgcggctgggatggcggtgactgctcg
ctcaatttcaatgacccctggaagaactgctcacagtcactgcagtgctggaagtacttc
aatgatggcaagtgtgactcgcagtgcaacaacgcgggctgcctgtatgatgggtttgac
tgccagaagtacgaggggcagtgcaaccctctgtacgaccagtactgtaaggaccacttc
tcagatggtcactgtgaccagggctgcaataactttgaatgcgagtgggatgggctggac
tgtgcaaacaacatgcctgagaagctggcggatggcacgctggtggtggtggtcctcatc
acccccgagaacctgaagaacaattccttcaacttcctgagggagctgagccgtgtgctg
cacaccaatgtagtcttcaagaagaacgccaagggagagtacatgatcttcccatactat
ggcaacgaggaggagctgaaaaagcactacatcaagaggtcagcggaggactgggcagat
atgtccagtgctgtcatcaacaaagtgaagagcagcctctactcgagggctggcaggagg
cagaagagagagctggatcagatggacatcagaggatccatcgtctacttggaaattgac
aacaggcagtgcatccagtcgtcctcccagtgcttccagagcgcaaccgatgtggcagcc
ttcctgggggccttggcctccctgggcaacctgaacattccctacaaaatagaggctgtc
aagagtgaaacggcggagcccgcgaggaactcccagctgtatcctatgtatgtggtggtg
gctgcactggtcttgcttgctttcattggagtgggagtgctggtgtcccgcaagcggcgc
agggagcatggccagctctggttcccagagggcttcaaagtgacagagtcgagcaagaag
aagcgccgagaaccgcttggggaagattctgttggactgaaacccctcaaaaatgcttct
gacggcacgctgatggacgacaaccaaaatgagtggggtgacgaggagaccctggacacc
aagaagttcaggtttgaggagcaagcgatgctgcctgacacagatgaccagacagaccac
aggcagtggactcagcagcacctggatgctgccgacctccgcatctcctccatggcccca
accccaccgcagggcgagatcgatgcagactgcatggatgtcaacgtacgaggtccagat
ggtttcacgcccctcatgatcgcctcgtgcagcggaggagggctggagactggcaacagc
gaggaggaggacgatgctcctgcagtcatctcagatttcatctaccagggagccagtttg
cacaaccagaccgaccgcaccggtgagacggcgctgcacctggctgcccgctactcgcgc
tccgacgctgccaaacgtctgctggaggccagcgctgatgcgaacattcaggataacatg
ggcaggacccctctgcacgccgccgtctctgccgatgcccaaggagtcttccagatcctg
ataaggaacagggcgactgatcttgatgcccgaatgcacgacgggacgaccccactgatc
ctggctgctcgcttggctgtagaggggatgctggaggacctcatcaactgccacgcagac
gtcaacgctgtggatgatttgggcaagtcagcactgcactgggcagctgctgtgaacaat
gtcgaagccgcagtcgtcctcttgaagaacggtgccaataaggatatgcagaacaataag
gaggagaccccactgttcctcgccgccagagaagggagctacgaaacagccaaggtcctg
ctggaccactttgcaaaccgtgacatcacggaccacatggaccggctgccgcgggacatc
gcgcaggagcgcatgcaccacgacatcgtgcgcctgctggatgagtacaacctggtgcgg
agccctccgctgcacagcggcccgctcggggcccccacgttgtcccccccgctctgctcc
cccagcagttacatcggcaacctgaagccggccgtgcagggcaagaaagccaggaagccg
agcaccaagggcctgagctgcaatggcaaggattccaaagacctgaaagcccggaggaaa
aaatcacaagatggaaaaggctgtctgctcgacaactccagcgtgctgtccccagtggac
tccctggagtcaccccatgggtacctgtccgacgtcgcctcccctccgctgatgacttct
ccattccagcagtccccttccatgcctctgaaccacctgccgggcatgcccgacgcccac
atgagcatcaaccacctcaacatggcagggaagcaggagatggccctgggcggctctggc
aggatggccttcgaggcggtgccgccgcgcctctcgcacctccctgtctccagccccagc
acggccatgagcaacgccccgatgagtttctccgttggcggagccgccggcctgagcggg
cagtgcgactggctgagccggctgcagagcggcatggtgcagaaccagtacagcgccatg
cggggcggcatgcagccgggcacgcaccagcaggcgcagaacctgcagcacggcatgatg
agctccctgcacaacgggctgcccagcaccagcctgtcgcagatgatgagctaccaagcc
atgcccagcacccggctggcctcccagccccacctgctgcagaaccagcagatgcagcag
atgcagcagcccggcatgcagcagcccggcatgcagccgcagcccggcatgcagcagccc
caacagcagccccagcagcagccccagccgcagcagcaccacaaccccggctccaacgcc
agcggccacatgggccaaaatttcctcggtactgagctgagccagcccgacatgcagccg
gtgagcagcagcgccatggcggtgcacaccatcctgccccaagattcgcagctgctcccc
acctctctgccgtcctcccttgcgcagcccatgaccaccacgcagttcctgaccccccct
tcccagcacagctattcctccccgttggacaacacccccagccaccagctccaggtgccc
gaccaccccttcctcactccctctccggagtctccagaccagtggtcgagctcctcgccc
cattccaacgtgtccgactggtctgagggcatctccagcccccccaccagcatgcagtcg
cagatgggacacatccccgaagccttcaagtga
DBGET
integrated database retrieval system
