Phasianus colchicus (Ring-necked pheasant): 116234536
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Entry
116234536 CDS
T07365
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116234536 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116234536 (LSM1)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116234536 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
116234536 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
116234536
NCBI-ProteinID:
XP_031458071
Ensembl:
ENSPCLG00000010135
UniProt:
A0A669Q1P0
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIQDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTLLQQVSIEEILEEQRVELQAKQESEKLKVQALKER
GLVVPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgccgggtacggccagcctcatccaggacatcgacaagaaacacctggtc
ctgctgcgggacggtcggacgctgatcggattcctacgcagcatcgatcagttcgcaaat
ctggtgctgcatcaaaccgtggagcgcattcacgtgggcaagaagtatggagacatcccc
cgagggatctttgttgtgagaggagagaacgtggtgctgctgggggagatcgacctggaa
aaagagagcgacacgctgctgcagcaggtatccatcgaggagatcctggaggagcagcga
gtggagctgcaggccaagcaggaatcagagaagctgaaggtgcaggcgctgaaggaacgt
ggcctggtggtacccagggctgacacgttggatgagtactga
DBGET
integrated database retrieval system
