Phasianus colchicus (Ring-necked pheasant): 116234820
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Entry
116234820 CDS
T07365
Symbol
TNPO1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116234820 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116234820 (TNPO1)
03009 Ribosome biogenesis [BR:
pcoc03009
]
116234820 (TNPO1)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
116234820 (TNPO1)
Ribosome biogenesis [BR:
pcoc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
116234820 (TNPO1)
Pre-60S particles
116234820 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
IBN_N
Vac14_Fab1_bd
TOR1L1_N
TPR_IPO5
Cnd1
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
HEAT_GCN1_C
MMS19_C
CEP104-like_TOG
Dopey_N
UNC45-central
HEAT_GCN1_C_2
RTP1_C1
VPS15-like_hel
ARM_TBCD
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
116234820
NCBI-ProteinID:
XP_031458462
Ensembl:
ENSPCLG00000012896
UniProt:
A0A669Q4P2
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MEYEWKPDEQGLQQILQLLKESQSPDTTTQRAVQQKLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHFHNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASK
GELQNWPELLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFL
QFFKHSSPKIRSHAVACVNQFIISRTQALMMHIDAFIENLFALATDEEPEVRKNVCRALV
MLLEVRMDRLLPHMISIVEYMLLRTQDQDENVALEACEFWLTLAEQPICKDVLCRHLTKL
IPVLVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIRPRFHRSRTVAQKHEEDGIEDRDDD
DDEIDDDDAISDWNLRKCSAAALDVLANVFRDELLPHILPLLKELLFHPEWVVKESGILV
LGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKP
LMTELLQRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLI
LYDAIGTLADSVGHHLNKPEYIQMLMPPLIHKWNMLKDEDKDLFPLLECLSSVATALQSG
FLPYCEPVYQRCVNLVQKTLAQAMLHNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIE
QLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPE
FISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGY
VCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMITVNPNGVFQDFIFFCDAVA
SWISPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAYYGV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgaatggaagcccgacgagcaggggctccagcagatcctgcagctgctgaag
gaatcgcagtccccggacaccaccacgcagagagccgtgcaacaaaaactagaacaactc
aatcaatatccagatttcaacaactacctgatttttgttcttacgaagttgaagtctgaa
gatgaaccaacacgttccttgagtggtctcatcttgaagaataatgtaaaagcacatttt
cacaacttcccgaatggggtaactgacttcatcaaaagtgaatgtctgaacaacattggt
gattcctctcccttaattagagctaccgtaggtattctgataacaaccattgcttcaaaa
ggagaattacagaattggcctgaacttttaccaaagctttgcagtctcttagattcagag
gactacaatacttgtgagggtgcatttggggctcttcagaagatatgtgaagattctgct
gaaattttagatagtgatgtattagatcgaccactcaatatcatgatacctaaattctta
cagttcttcaagcacagcagtccaaaaataagatctcacgctgttgcatgtgtcaatcaa
tttatcatcagcagaactcaagctcttatgatgcacatagatgcatttatagagaatctt
tttgcactggctactgatgaggagcctgaggtacgcaaaaatgtttgccgtgctctggta
atgttgctggaagttcgcatggatcgtcttcttcctcatatgattagtatagttgagtac
atgcttctaaggacccaggaccaagatgaaaatgtggctttggaggcctgtgagttttgg
ctgactttggctgaacagcccatttgtaaggatgttttatgtcggcatcttactaagctg
atacctgtgctggtgaatggtatgaaatattccgagatagatattattttgctgaagggg
gatgttgaagaagatgaagctattccagatagcgaacaggacataagacctcgttttcat
cgttcacgaacagtagctcagaaacatgaggaagatggcattgaagatcgtgatgatgat
gatgatgaaattgatgatgatgatgctatttctgactggaatttaaggaagtgttctgct
gctgctttagacgttttggccaatgtatttcgtgatgaacttttgccacacatcttaccc
cttttgaaggaattgctcttccatcccgaatgggtagttaaggaatcaggtatccttgtt
cttggagcaattgctgaaggctgcatgcagggtatgattccatatcttcctgagctgatc
cctcaccttattcagtgcctctctgacaaaaaggctcttgtgcgctccattacatgctgg
actcttagtcgctatgcacactgggtagttagtcaacccccagacacatacttgaagcca
ttaatgactgagttgctacagcgtatcctggatagcaacaagagagtacaagaagctgcc
tgcagtgcctttgctactctagaagaggaggcttgtacagaacttgttccttatcttgca
tatatacttgacactttggtcttcgcatttagtaaataccagcataaaaacctgcttatt
ctttatgatgctataggaactctagcagattctgtaggccatcatctaaataaaccagaa
tatattcagatgctcatgcccccgttaatccacaagtggaacatgttgaaggatgaagat
aaggatctcttccctttattagagtgcctgtcgtcagttgctactgccttgcaatctggc
tttcttccatactgtgaacctgtgtaccagcgttgtgtaaatctagtgcagaagaccctt
gcacaagccatgttgcacaatgctcaaccagaccaatatgaggctccagataaggacttc
atgattgtggctcttgatttactcagtggtttagctgaaggtcttggaggcaacattgag
cagctggtagctcggagcaatatcctgacactgatgtaccaatgcatgcaggataaaatg
cctgaagtacgacagagttcttttgcgctgttaggtgatctgacaaaggcgtgttttcag
catgttaaaccttgcatcgctgatttcatgcccattttgggaaccaacctaaaccctgaa
ttcatttctgtgtgtaacaatgctacctgggcaattggagaaatctccattcagatgggt
atagagatgcagccttatattccaatggtgttgcaccagcttgtagaaataattaacaga
cccaacacaccaaagacattgttagagaacacagcaataacaattggtcgtcttggttac
gtttgtcctcaagaggtggcccccatgctacagcagtttataagaccctggtgcacctct
ctccggaacataagagacaatgaggaaaaggactcagcattccgtgggatatgtaccatg
atcacagtcaaccccaatggcgtattccaagactttatttttttttgtgatgctgttgca
tcgtggattagcccaaaagatgatctccgagacatgttctgtaagattcttcatgggttt
aaaaatcaagttggggatgagaattggaggcgtttctcagaccagtttcctcttccctta
aaagagcgccttgcagcttactatggagtttaa
DBGET
integrated database retrieval system
