Phasianus colchicus (Ring-necked pheasant): 116234889
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Entry
116234889 CDS
T07365
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03013
Nucleocytoplasmic transport
pcoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116234889 (UPF3B)
03015 mRNA surveillance pathway
116234889 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116234889 (UPF3B)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
116234889 (UPF3B)
mRNA cycle factors
P-body specific factors
116234889 (UPF3B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
116234889
NCBI-ProteinID:
XP_031458591
Ensembl:
ENSPCLG00000009343
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MKEDKENARPKERRGAPAGPGAVPGGGSGAAGGSDGRTGGTAELERLERPKDKKETLSKV
VIRRLPPSLTREQLEEHLQPLPEHDYFEFFANDSSLYPHVFSRAYINFRNQEDIVLFRDR
FDGYVFVDHKGQEYAAIVEFAPFQKAAKKKSKKKDAKTGTIEDDPEYKKFLESYSADDEK
LTSTPETLLEEIEARNKELIAKKTTPLLNFLKNKQRLREEKREERRRRELERKRQREEER
RKWKEEERRKRKEAEKLKKVDRCPEKERDRSKEEPKIKLLKKPEKDEKDLEKKEKSKKLE
RETLREEKNASSASAKRSDGETKEEKAKKSEDECVKDYRDRDRDFERDREYERAQREKLR
RQEEERRRQKERFEKEKVFRRKEEEVKKERDLLRDKGKKSDLTDFTCGMDKSEKVTKDDK
KEDTIKRDRIRNKDRPAMQLYQPGARSRSRLCQYEDSAAKSTDQGAEKKQESESSNVKEE
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggacaaggagaacgccaggcccaaggagcggcgcggggcccctgccggaccg
ggagcggtgccgggaggcggctcgggggcggcgggcggctctgacgggaggaccggcggc
accgccgagctcgagcggctggagcggcccaaggacaagaaggagacgctgagcaaggtg
gtgatccggcggctgccgcccagcctcacccgggagcagctggaggagcacctgcagccc
ttgcccgagcacgactacttcgagttcttcgccaacgattccagcctgtacccgcacgtc
ttctcccgcgcctacatcaacttcaggaaccaggaggacatcgtgctgttccgggaccgc
ttcgatggctatgtcttcgtggatcacaaaggtcaggaatatgctgccatagtagagttt
gcacctttccagaaagctgcaaagaagaagagcaagaaaaaggatgccaaaacggggaca
attgaagatgatccagagtacaagaagtttttggaaagttacagtgcagatgatgagaag
ttaacgtccactcctgaaaccttattagaggaaatagaggcaagaaacaaagagctgatt
gctaaaaagactactcccttactgaacttcctgaaaaataagcagaggctcagagaggaa
aagagagaggagaggaggaggagagaattggaaagaaaaagacaaagggaagaagaaaga
agaaaatggaaggaggaggagagaagaaagagaaaagaagcagaaaaactgaagaaggta
gacagatgtccagaaaaagaaagagacagatcaaaagaagaaccaaagattaagctactt
aagaagcctgaaaaagatgagaaagacttggagaaaaaagaaaaatccaagaaactggaa
agagagactctgagggaggaaaaaaatgcgagtagtgcatctgccaaacgatctgatggg
gagacaaaagaagagaaggcaaaaaaatcggaagatgagtgtgtaaaggactacagggat
cgagatagagattttgaaagagacagagaatatgagagagcacagagggagaaactgagg
cgccaagaagaagagcgtcggaggcagaaagagcgctttgagaaagaaaaggtttttaga
agaaaagaggaagaggtgaaaaaggagagagacttgctcagagataagggaaagaaaagt
gatcttacagactttacctgcggcatggacaaatctgagaaagtaaccaaagatgataaa
aaagaggatacgattaagagggatcgtatcagaaacaaggatcgtccagcaatgcagctg
taccagcctggagcccgaagccgaagcagattgtgtcagtatgaagacagtgctgcaaag
tccacagatcagggagcagagaagaaacaagagagtgagagcagtaacgtgaaggaagag
gagtga
DBGET
integrated database retrieval system
