Phasianus colchicus (Ring-necked pheasant): 116234901
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Entry
116234901 CDS
T07365
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03013
Nucleocytoplasmic transport
pcoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116234901 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
116234901 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116234901 (THOC2)
03041 Spliceosome [BR:
pcoc03041
]
116234901 (THOC2)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
116234901 (THOC2)
Spliceosome [BR:
pcoc03041
]
Complex C
Other components
EJC/TREX
116234901 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116234901 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
116234901
NCBI-ProteinID:
XP_031458608
Ensembl:
ENSPCLG00000009385
LinkDB
All DBs
Position
Unknown
AA seq
1593 aa
AA seq
DB search
MATVLPAEWIKNWEKGGRNEFLQLCRALSEDKSHDSLSFRDIQQALYELSSHVVRGNLKH
EQASGVLADIIEFREDMPSILADAFCILDIETSCLEEKTKRDCFTQLVLSCLYLVSDTVL
KERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDL
SGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQT
LCHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREI
VEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQS
IMDQMPPFYATSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISPLPNKRAPKQADS
FEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGNKQEDKEKMEILFSCV
LSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKA
QTIDRAKYIMKRLTKENVKPSGRQIGKLSHANPTILFDYILSQIQKYDNLITPVVDSLKY
LTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQY
VANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTK
KSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGF
LASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHQISSKYDELKKAEKGNKQQ
HKVHKYITACELVMAPVHEAVISLHPPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREV
NKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNW
LLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSD
IIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGN
KADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQA
LERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVAATVQN
GPGGAGMPTSLTINTAKLEESAAEETDKLKEKSQGTVKVINKTVNATPKVTTSNGNSASN
SKIIKEKDDKEKSGKEKDKEKKEKIPATTPETKALGKDGKDKPKEERANKDEKPREIKEK
TPKSDKEKEKAKKEEKASKEEKSKTIVTTIESKSVAEKEREKEPSREKDVAKDMKSKENT
KGGEKIPVAGSLKSPVPRSETSECEREQKRRKVDIHSSPSHSSTVKDNLNELKDSSTKHY
INHTTPTLSKSKEREVDKKDLDKSRERSREREKKEEKDRKDRKRDHSNSDREVPQDSTKR
RKEENGTTGSSKHSKSESPSDSPRSNEKEREKSKSKSSGKEKGDSIKAEKMEKSSSGSKK
ESRHDKEKEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtgctccccgccgagtggataaagaactgggagaaagggggcaggaacgag
tttttgcaactatgtcgcgctctcagtgaagacaaaagccatgacagcctcagtttcaga
gatatccagcaggctttgtatgagctttcatctcatgttgttagaggaaacttaaagcat
gaacaagcttctggtgttcttgctgatattatagaatttcgtgaggacatgccttccatc
ttagctgatgctttctgcatattagatattgaaacaagttgcttagaagaaaaaactaaa
agggattgttttactcagctggtgttatcctgcttgtatcttgtatcagatactgtccta
aaggagcgtttagatccagaaacactggaatcgttaggacttatcaagcagtctcaacaa
ttcaaccagaaatctgttaaaataaagacaaaactattttacaagcaacagaaatttaat
ttattacgagaggagaatgaaggttatgcaaagctgattgcagaactggggcaggaccta
tctggaaatatcactagtgatttaatcctcgaaaatatcaaatctttaataggatgtttt
aaccttgatcctaacagagttttggatattatcctagaagtctatgagtgcaggcctgag
tatgatgatttctttgtaccactgatagagtcttacatgtacatgtgtgaacctcaaact
ctatgccatatccttgggttcaaattcaaattttatcaggatccaagtggtgagacacct
tcctccctatacagagttgctgctgtcctgttgcaacataatctcatagatttggaagat
ctttatgttcatcttcttccaggggataatgccatcattgaagaacacaagcgagagata
gtggaagctaagcaaattgtgagaaaactcaccatggttgtcttatcctctgagaagact
gaggaaaaggagaaggaaaaagaaaaagaggaggagaaaactgaaaagcctccagataat
cagaagcttggtttattggaagctttattaaaaattggtgattggcagcatgcacaaagc
attatggatcagatgcctccattctatgctacttcacataagcctattgcgattgccctt
tgccagcttgtacacgtgacaattgaacctttgtaccgcagggttggtgtaccaaaaggg
gctaaagggtcaccaatttctcctctgccaaacaagagagctccgaaacaagcagacagc
tttgaagacttgagaaaggaagtgttcaacatgctatgctaccttggtcctcatctctcc
cacgatcccattttatttgcgaaagtggttcgccttggaaaagcatttatgaaagagttt
cagtcagatggaaataagcaagaagataaggagaaaatggagatactgttcagctgtgtg
ttgagcattactgatcaagttctgcttccttctctttctttgatggactgcaatgcgtgc
atgtctgaagaattatggggaatgttcaaaacatttccataccagtaccggtaccgtctt
tatggacagtggaagaatgaaacatacaatagccatccactcctagtgaaagttaaagct
caaaccatagaccgagccaagtatatcatgaagcgtctgactaaggaaaatgtgaaaccg
tctggaagacagattgggaaactcagccatgccaatcctaccattttatttgattatatt
ttatcgcaaatacaaaaatatgataacttaataaccccagttgttgattcactgaaatac
ctcacttcactgaattatgacgtcttggcatattgtatcattgaagctctggcaaacccc
gagaaggagagaatgaagcatgacgacactactatctcgagctggctgcagagtctggct
agcttttgtggtgctgttttcagaaaataccccattgaacttgctggtctacttcaatac
gtagccaaccaattgaaagctgggaaaagctttgatttgcttattttaaaagaggtagta
caaaaaatggcagggatagaaattacagaagaaatgacaatggaacagttggaagccatg
actggtggagaacaactaaaagctgagggtggatactttggccaaattaggaatacaaag
aagtcttctcagagactgaaggatgcattattggaccacgatctcgcccttccactatgc
ctgcttatggctcaacagagaaatggtgtgatctttcaagaaggaggggaaaaacatctg
aagctggtgggaaaactctatgatcaatgccatgacaccctggtacagttcggtgggttt
ttagcatccaatctgagcacagaggattacattaagcgagtgccttcaattgacgttctt
tgtaatgagtttcacacacctcatgatgctgcgtttttcctctcgaggcccatgtatgca
caccaaatttcatcaaagtatgatgaacttaaaaaagctgaaaagggaaataaacagcaa
cacaaagttcacaaatacattacagcttgtgaactggtgatggctccagttcatgaagct
gtgatctctctgcaccctcccaaggtttgggatgacatcagtcctcagttttatgccacg
ttctggtctctgactatgtatgaccttgctgtcccacatagcagctatgacagagaagtc
aataaacttaaagtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaa
aagaaaaaagaaaaagaacgttgcactgctcttcaggacaagctccttgaagaggagaag
aaacagttagagcacgttcaaagagttttacagagactgaaattagagaaggataactgg
cttctggcaaagtctaccaaaaatgagactatcacaaagtttttgcagttatgtatattt
cctcgctgcattttttcggcaatagatgcggtttattgtgctcactttgtagaactggtt
catcagcagaaaacacccaacttctccacacttctctgttatgatagagttttctctgat
attatatatacagtagcaagctgtactgaaaatgaagctagtagatatggcaggtttttg
tgctgcatgctggagactgtgactagatggcacagtgacagagtcatatatgagaaggaa
tgtggcaactatccaggcttcctaactatattacgagcaactggatttgatggtggaaat
aaagctgatcaattggattatgagaattttagacacgtggtacacaaatggcactataaa
ttaactaaggcttctgtacactgccttgaaactggtgaatatacacatatcagaaatatc
ctgattgtgctgaccaaaatccttccatggtatccgaaagtgttgaacctgggccaagcc
ttggaaagaagagtgcataagatatgtcaggaagagaaagagaagagacctgatctatat
gcattggctatgggctattctgggcagttgaaaagtaggaagccttttatgatacctgaa
aatgaattccaccacaaagacccacctgccaggaatgctgtagctgcaacagtacaaaat
gggccaggtggtgctgggatgcctacatctctcacaataaatacagcaaaactggaggaa
agcgctgctgaagagactgataaactaaaggagaagtctcagggtactgtgaaagtcatt
aataaaactgtcaatgctacaccgaaggtgacaacaagcaatggaaacagtgcttctaat
agcaaaattattaaagagaaagatgataaagaaaaaagcgggaaggaaaaagataaagaa
aagaaagaaaagattccagctaccactccagagacgaaggcacttgggaaggatgggaaa
gataaaccaaaggaagaacgggcaaataaagatgagaaaccaagagagattaaggagaaa
acaccgaaatctgacaaagagaaggagaaggccaagaaagaagaaaaagcttcaaaggaa
gaaaaatccaagacaattgttaccaccatagagtcaaagtcagttgcagaaaaggagaga
gaaaaggagccatccagagaaaaagatgtagcaaaggatatgaaatccaaggaaaatact
aaaggaggagaaaagattccagtagctgggtccttgaagtctcctgttccccgatcagaa
acatcagaatgtgagagggaacaaaaacgccgcaaagttgatatccattcttctccatca
cattcctcaacagtaaaggacaacctcaacgaactcaaggactcttcaacaaagcactac
attaaccacactactccaacactgtccaagagtaaagagagagaagtggacaagaaagac
ttggacaagtcaagggaaagatccagagagagagagaagaaagaggagaaggacaggaaa
gatcgaaaaagggatcattccaacagtgaccgagaggtgccacaggactcaactaaacga
cgcaaagaagaaaatgggacaacaggttcttcaaaacatagtaaaagcgaaagtccttct
gattctcctcgttcaaatgaaaaagagagggagaagagcaaatcaaaatcttccggaaaa
gaaaaaggtgactcaatcaaagcagaaaagatggagaagagctcctctggtagcaaaaag
gaatcaagacatgacaaagaaaaagaaaagaaagaaaaacgagacagcactggtgggaaa
gaagaaaagaaacatcataaatcttcagacaagcacagataa
DBGET
integrated database retrieval system
