Phasianus colchicus (Ring-necked pheasant): 116234977
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Entry
116234977 CDS
T07365
Symbol
NDC1
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116234977 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116234977 (NDC1)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116234977 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
116234977
NCBI-ProteinID:
XP_031458693
Ensembl:
ENSPCLG00000005008
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MPGLAVLTALRARAASCREWAGKSGVALPIGCPGLPAVLRRKRREGGGRWAAETLNGAGP
GMEAAAAGRQRALLRQVLGWRLAAAVAWSVLLLPVCTAAFVLLSGVQPLRPLRWLSDSFD
DLCTSHVIFCILLMSVVILVISVFNAEFYAVVPSIPCSRLALIGKIIHPQQVIHSVAHAV
MGMLVAWCAAVMTKGRFQFLAVPCTISESLDDAVPQMCLNEYHLFFLLSGAFMGYCYSLL
YLINNMNYLPFPIIQQYKYLRFRRSLPLLIKHSCVESLYSVRNFCVAYYFFGYIPKMWIS
TTMDLRIDSKLHPLDTLSGLLDLSLFYHAWLCGVFLLVTWYIAWLFFKIYATETHRFPVQ
PTFAEETDQCLPKILNSNPPLIIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTA
ISRECLSLLTDLTQRLIAQQEAAAANGRAKQQVGEMKVSPQTPGAAGAEDIPFQLQRSNV
IPRAAMSSLVKSSSVPLKASPGSDIGSPFSSPALNCKAGILDLSSPWHGKVQSPLIVRRG
PKLWTSGSGLQMNGSHHESFPVLSVARVGSEAVQPSFIYTWLQNKQEQIKNFLSRRVLIM
YFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAILNTLLTLQE
VVDRHFKLPHVSSKPPRSSGSLVDTSYKTLRFALRASLKTALYRITTVFGEHLNAVQVST
EHKKRLQQFLEYKE
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgccgggactcgcagtcctcaccgcgttgcgcgcccgcgccgcttcctgtcgggagtgg
gcggggaaaagcggcgtcgcgcttcctattggctgccccgggcttcccgccgtgctgcgc
cggaagcggcgtgaaggaggcggccgttgggcggcggagactttgaacggcgccgggccc
ggcatggaggcggcggcggcgggccggcagcgggccctgctccgccaggtgctgggctgg
aggctggcggccgccgtcgcctggtccgtgctgctgctgcccgtctgcaccgcggccttc
gttctcctcagcggcgttcagcccctgcgcccgctgcgctggctgtccgattctttcgat
gatttatgtacttcacatgtcatcttttgcatccttctgatgtctgtggtgattctggta
ataagcgtcttcaacgctgagttctatgcagttgtgccatcgatcccgtgctctcgatta
gcgctgataggaaaaataattcaccctcagcaagttatccactcagttgctcatgctgta
atgggcatgttggttgcttggtgcgctgcagttatgacaaaaggcaggttccaatttctt
gctgtgccctgcacgatttcagaaagcctcgatgacgctgttcctcagatgtgcctaaat
gaataccacctcttttttctactttctggtgctttcatgggatactgttacagtctctta
tatctcattaacaatatgaattatttgccatttccaatcatacagcaatacaagtactta
cgtttcagaagatctttgcctctcctcattaaacacagttgtgtggaatcgctgtactca
gttagaaacttctgcgttgcgtattacttctttggttatatcccaaagatgtggataagt
accacaatggatcttcgtatagacagtaaattgcatcctcttgacacactgtctggctta
ttggatctgtccttattttaccatgcctggttatgtggtgtgtttctcctggttacctgg
tacattgcgtggttgttcttcaagatctatgctacagagacacatcgctttcctgttcag
ccaacttttgctgaggagacagatcaatgcctgcctaaaatcttaaacagcaaccctccg
ctcattataaagtttttagccttacaagacttgatgttactttcccagtattctcctgtt
cgacgtcaggaggtctttagcctcagccaaccaggtgggcacccacacaactggactgcg
atatcaagggagtgtttgagtcttctgactgatctgacccagaggttgattgcacagcag
gaagctgcagcagcaaatgggagagcaaagcagcaagtgggagagatgaaagtatctccg
cagactccaggagctgcgggggcagaagatatccctttccagttacagaggtctaatgtt
attcccagagctgccatgtcttccctggttaaatcatcctcagtgcctttaaaggcatcg
cctgggtctgatattggttcacctttcagttcacctgctttaaattgcaaggcgggaatt
ctggatttaagctctccttggcatggaaaagtccaaagtcctctcattgtgcgaagggga
ccaaagctgtggacatcaggttcaggtctgcaaatgaatggttcccaccatgaatccttc
ccagtgctctctgttgcaagagttggcagtgaggcagtacagccaagttttatttacaca
tggctccagaacaagcaagaacagataaaaaacttcttatcaagacgagtgctgataatg
tatttcttcagcaagcatccggaagcctccatccaagctgttttctctgatgcccagatg
cacatttgggcattggaaggtctgtctcatttggtagcagcctccttcactgaagaccaa
tttggagttgttcaaactacgctgccagctatcctgaatactttactgacccttcaggag
gttgtagacagacacttcaaactgcctcatgtttctagcaaacctcccaggagttcagga
agcctggtggacacatcctacaaaacactacgatttgcactgagagcatccttgaaaaca
gctctgtaccggataaccactgtctttggagaacacttaaatgcagtgcaagtctccaca
gaacataagaaaagacttcagcagttcttggaatataaagaataa
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