Phasianus colchicus (Ring-necked pheasant): 116235013
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Entry
116235013 CDS
T07365
Name
(RefSeq) nucleolar RNA helicase 2-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcoc03009
]
116235013
03036 Chromosome and associated proteins [BR:
pcoc03036
]
116235013
Enzymes [BR:
pcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116235013
Ribosome biogenesis [BR:
pcoc03009
]
Eukaryotic type
Pre-60S particles
Helicases
116235013
Chromosome and associated proteins [BR:
pcoc03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116235013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
LRIF1
AAA_30
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116235013
NCBI-ProteinID:
XP_031458748
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MPEATRIRAGSGAESEPESPMESEAAPDGSRRRRKKEKKEKKSKRHDKARKRKAQTDESE
QSEEESDSPKLKKAKNGGKQNGHVREESPENSRLSSVSAKSPHKKQHSNSSETSSGDGDS
DQEQEMTEEQKEGAFSNFPISKGTIQLLQARGVTYLFPVQVKTFHPVYSGQDVIAQARTG
TGKTFSFAIPLIEKLQADSEERRRGRSPKVLVLAPTRELANQVAKDFKDITKKLTVACFY
GGTPYNGQIDLIRSGIDILVGTPGRIKDHLENGKLDLTKVKHVVLDEVDQMLDMGFAEQV
EDILRVAYKKDSEDNPQTLLFSATCPNWVYDVAKKYMKSKYEQVDLIGRRTQKAATTVEH
LAIECHWSQRAAVIGDVIQVYSGSHGRTIVFCETKKDANELALNASIKQDCQSLHGDIPQ
KQREITLKGFRNGAFKVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGR
TGICICFYQRKEENQLRYVEQKAGITFKRVGVPTATDIIKASSKDAIRCLDSVPQSAIEY
FKESAELLIEEKGPVNALAAALAHISGATSIEQRSLLNSDVGFVTMVLRCSEEINNMSYV
WRKLREQLGGDVDRKVNRMCFIKGRMGVCFDIPAADQKDIEERWEDSKQCCLCVANELPE
LEESQRGGGRGGGGGGRGGGGGGRGGGGRGRGGNSRSFSGSRNGRRGGSGRNRFKSRGQK
RSYDRAFDR
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggctacgcggatccgcgccggcagcggggccgagtcggagcccgagagccct
atggaaagcgaggccgcaccagacggcagtcggcggcggcgcaagaaggagaagaaagag
aagaaatccaagcggcacgataaggctcggaagaggaaagctcagacggatgaaagcgag
cagtcggaagaggagagcgactcgccaaagctcaagaaagcaaagaacggagggaagcaa
aatgggcacgtgagggaggagagcccagagaactccaggctgtcttcagtcagtgccaaa
tccccccacaagaaacagcacagcaactccagtgaaacgtccagcggggatggggacagt
gaccaggagcaggagatgacagaagagcagaaagagggtgctttctccaatttccctatc
tcaaaagggaccattcagcttcttcaagctcgaggagtgacatacctgtttcctgtgcaa
gtgaagaccttccacccggtatattctggccaagatgtaattgctcaagcacgaactgga
acagggaagactttctcttttgctattccgttaattgaaaagcttcaggcggactcagag
gaaagaagaagaggccgttcaccaaaagttttggttcttgctccaacaagagagctggca
aaccaggttgccaaagatttcaaggacataacgaaaaagctcacagtagcttgtttttat
ggaggaacaccatataatggacaaattgatctcattagaagtggaattgacattttggtt
gggacacctggtcgaatcaaagaccatcttgagaatggcaagctagaccttaccaaggta
aaacatgttgtccttgatgaagttgaccagatgttggacatgggatttgctgagcaagtg
gaggacatcttacgagttgcgtacaagaaagattctgaagacaatccccagacgctactg
ttttctgcaacgtgtccaaactgggtctatgatgtggctaaaaaatacatgaagtctaaa
tatgagcaggttgacttgattgggagaagaactcagaaggctgctacaacagtagaacat
ttggctatagagtgtcactggtctcagagagctgcagttattggagatgtcattcaggtc
tacagtggcagccatgggaggaccattgtattttgtgaaaccaaaaaggatgcaaatgaa
ctggctctgaatgcatcaatcaagcaggattgccagtcgttgcatggtgacattcctcag
aagcaaagagagatcacactgaaaggttttagaaacggtgcatttaaagttctggttgca
accaatgtggctgcccgtggtttagatatccctgaggttgacctagttgtacagagttca
ccaccgaaggatgtggagtcctacatccatcgttctggacgcacaggtcgagctggccgc
actgggatctgtatctgtttttatcagcgaaaggaagaaaatcagttaagatatgtggaa
cagaaagcgggcattacgttcaagcgagttggtgttcctactgcaacagatataataaaa
gcttccagcaaggatgctatcagatgtctggattctgttcctcaatctgctatcgagtat
ttcaaagagtctgctgagttgctaatagaagaaaagggaccagttaatgctttggctgca
gctctagcacatatttcaggcgctacttccattgaacagcgctccctgctgaactcagat
gtgggatttgttacaatggtactgcgctgctctgaagaaataaacaatatgagctatgtt
tggcgaaaactacgggaacagctgggtggtgatgttgacagaaaggtgaacagaatgtgt
ttcatcaagggaagaatgggtgtgtgctttgatattcctgcagcagatcaaaaggacata
gaggaaagatgggaagattccaagcagtgctgtctgtgtgtggcaaatgaattacctgag
cttgaagaatcccagcgaggaggaggaagaggaggaggaggaggaggaagaggaggtgga
ggaggaggaagaggaggaggaggaagaggaagaggaggaaatagcagaagtttctcaggc
tccaggaatggacggcggggtggctcgggaagaaacagattcaaaagcaggggccagaaa
agaagctatgacagagcgtttgatcgctga
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