Phasianus colchicus (Ring-necked pheasant): 116235030
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Entry
116235030 CDS
T07365
Symbol
CDH23
Name
(RefSeq) cadherin-23 isoform X1
KO
K06813
cadherin 23
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pcoc03037
]
116235030 (CDH23)
04515 Cell adhesion molecules [BR:
pcoc04515
]
116235030 (CDH23)
Cilium and associated proteins [BR:
pcoc03037
]
Primary cilia and associated proteins
USH complex and associated proteins
116235030 (CDH23)
Cell adhesion molecules [BR:
pcoc04515
]
Cadherins
Major cadherins
116235030 (CDH23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Fibulin_C
PCDH15_12th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
116235030
NCBI-ProteinID:
XP_031458769
Ensembl:
ENSPCLG00000010794
LinkDB
All DBs
Position
Unknown
AA seq
2162 aa
AA seq
DB search
MRGVRPLDREQNSSHVLEVEAYNTEHGPMRSSVRVIVYVEDVNDEVPVFTQRQYNRLGLR
ETAGIGTSVAVVRATDRDTGNGGLVSYQILSGAEGKFEIDESTGLITTIDYLDYETKTSY
LMNVSATDQAPPNNQGFCSVYVSLLNELDEAVQFSNSSYEAVIMENIPLGSEVLRVQARS
IDNLNQITYKFDPNTNAQALSLFKINGITGVITVKGQVDREKGDFYTLTVVADDGGPKVD
STVKVTITVLDENDNSPQFDITSDSSVSVPEDSMVGRRVAVVLARDPDAGSNGQVTFSLT
AGNVGQAFEIRTTNNTYGEVLVARPLDRELLDHYTLRIQASDGGVPPRRKEHTLRVTVLD
VNDNPPVIDSPLGYNVSVSENVGGGTAVVQVRATDRDAGLNSVLSYYITRGNEDLTFRMD
RVTGEIATRPSPPDRERQSSYCLLVTVEDEGNPSLSATTTVFVTILDENDNAPVFQQQLY
EVTLDEGPATLNATLVTVQALDRDEGPNGTVTYAITEGNILGTFHINSTTGQIRTLKELD
YEISHGRYTLVVTATDQCPIASRRLTSTTTVLVNLNDINDNCPTFPRPYEGPFDVTEGQP
GPRIWTFLAHDGDSGPGGQVEYSIIAGDPLGEFVISPVEGELRVRKDAELDRENIPFYNL
TISARDRGVPPLSSTMLVGVRVLDINDNDPVLLNLPMNITLSEHAPVSSFVTRILARDAD
QGPNALLTFDITAGNKESAFYINSTTGIIYVNRPLDRERVAEYRLTITVKDNPENIRNAR
RDFDLLVISIADENDNHPLFTQSSYQAEVMENSPPGTPVTMLNGPILALDGDQGSNAMVT
YQLLATSLDLFIINNRTGVVSVKPGVVIDREALLDPLLDFTLVALDTGGLNSTASLTVTI
LDDNDNRPVFQPVSITTRLKENSPPGFSVLQVTATDADSGLNKQLDYRIEGGGQDRFLID
ATTGVIRVANLSIDREERDAYRLTVVAVDQGTPALSGTATISILIDDVNDCRPEFINPIQ
TVSVPESATPGTVVAEVTAIDRDLHPRLEYYLLEIVARDDTDALVSDQQEAFTVDFRTGA
VKIKTPLNRELVATYEVTISVHDNASEVIDRSVSVPNAKLTVNVLDVNDNTPRFRPFGVT
YFTERILEGATQGTTLISISAVDPDKGANGQITYELLDLSPEGYACLEDQSAGKVVANRT
VDYEEVQWLNFTVRASDNGSPRRSAEIPVYLQIVDVNDNNPIFSQPSYQKAVFEDVPLGT
VILRVKATDADSGRFALIQYSLGDGEGKFGINPDTGDIYVLSALDREKKDHYTLTAVARD
NPGDISSNRRENSVQVLITVLDINDFRPQFSKSQFSTSVYENEPAGTSVITMTATDLDEG
DNGVVTYSIEGPGAEAFKINKDSGLITSRRRLQSYERFNLTVVATDKGHPPLWGTTMLHI
EVIDINDNRPVFVRPPNGTILHIKEEIPLRSNVYEVYATDKDEGLNGAVLYSLLKTGAGN
KDWEYFSIDAVSGLIQTAMRLDREKQAMYNLIIVASDQGQPAYETMQPLQVALDDIDDNE
PIFLRPPRDSPQYQALSVPEHSQPGTVVGNVTGAVDADEGSNAIVYYFIAAGNREGNFQL
SREGKLQVLRDLDREKEPYYSIIVKASSQRNWSPPRGQRAGRAQPWDLSTDLTLQEVRIF
LDDINDQSPQFTKSEYTAGVATDAKVGSELIKVLAVDADVGNNSLVLYSILGIRYIKQHS
NDSEEVANIFSIGTLDGILRTFDLFTAYNPGYFVVDIMASDLVGHNDTAIVGIYILRDDQ
RVKIIINEIPDKVRQFEEEFISLLSNITGAIVNTDDVQFHVDKKGRVNFAQTELLIHVVN
RETNRILDVERVIQMIDENKEQLRNLFRNYNVLDVQPAITARAPDDLSALQMAIIVLAVL
LFLAAMLFILMNWYYRTVHKRKLKAIVAGSTGNRGFMDIMDMPNTNKYSFDGANPVWLDP
FCRTMELAAQAEHEDDLPENLSEITDLWNSPARTHGTFGREPSAAKPEDDRYLRAAIQEY
DNIAKLGQIMREGPIKLIQKDLEEDEERCPSQGSLRFRHKQPVELKGPDGIHVVHGSTGT
LLASDLNSLPEDDQKVLGRSLETLTADCGAYDHNARTESAKSTPLHKMREVIMESPLEIT
EL
NT seq
6489 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcgtgcggcccctggaccgtgagcagaactcctctcacgtcctggaggtggaa
gcctacaacacagagcacggccccatgaggagctccgtgcgggtgatcgtgtatgtggag
gatgtgaacgacgaggtgccagtgttcacccagcggcagtacaaccgcctggggctgcgc
gagacagccggcattggcacctcagtggccgtggtgcgggccacggacagagacacaggg
aacggcggcttggtcagctaccagatcctgtcgggtgccgaagggaagtttgagattgat
gagagtacaggtctcatcaccaccatcgactacctggactatgagaccaagacgagctac
ctgatgaatgtctcagccacagaccaggctccacccaacaaccagggcttctgcagcgtg
tacgtcagcctgctgaatgagctggatgaggccgtgcaattctccaacagcagctatgag
gctgtcatcatggagaacatcccgctgggatccgaagtgctccgcgtccaggcccgctcc
attgacaacctcaaccagatcacctacaagtttgatcccaacaccaatgcccaggcgctc
tctctcttcaaaatcaacggcatcactggggtgatcacggtgaaaggccaagtggatcgg
gagaagggggatttctacaccttgacggtggtggccgatgacggagggccaaaggtcgac
tctacggtgaaggtgaccatcacagtcctggatgagaatgacaacagcccacagtttgac
atcacctccgactcatctgtcagtgttccagaagacagcatggtgggcaggcgggtggct
gtggtcctggcccgtgaccctgacgcaggcagcaatgggcaggtgacattctcactgaca
gcagggaacgtggggcaggcgtttgaaatccgtaccactaacaacacctacggagaggtg
ctcgtggctcggccgctggaccgggagctgctggatcactacaccctgcggatccaagct
tcggatggcggcgtgcccccccggaggaaagagcacacgctgcgggtcaccgtcctcgat
gtcaacgacaacccgcccgtcatcgatagccccttgggctacaatgtgagcgtgagtgag
aacgtcggtgggggcacggccgtggtccaggtgcgcgccaccgaccgggatgccggcctc
aacagcgtcctgtcctactacatcacccgcgggaacgaggacctcaccttccgcatggac
cgcgtcactggcgagattgccacacggccctccccgccagaccgtgagcggcagagctcc
tactgcctgttggtcactgtggaggacgagggcaacccctcgctgtcggccaccaccacg
gtgttcgtcaccatcctggacgagaatgacaatgctccagtgttccagcagcagctgtat
gaggtgacgttggatgagggccctgccactctcaatgccacactcgtcaccgtgcaggcc
ctggaccgggacgaagggcccaacggcacagtcacatatgctatcactgaaggcaacatc
ttgggcactttccacatcaacagcaccacgggacaaatccgcaccctgaaggagctggac
tatgagatcagccatgggcgctacaccttggtggtcactgccactgaccagtgccccatc
gcctcgcgccggctgacgtcaaccaccacggtgctggtgaatctcaatgacatcaatgac
aactgtcccaccttcccacggccctatgagggccccttcgatgtgacagagggacaacct
ggaccccgcatctggaccttcctggcccacgatggggactcggggcccggtgggcaggtg
gagtacagcatcatcgctggggaccctctgggggagtttgtgatctccccagtggaaggg
gagctgcgggtgcggaaggatgctgagctggaccgcgagaacatccccttctacaacctc
actatctccgcccgggatcggggtgtgcccccactcagctccacgatgctggtgggcgtg
cgtgtgctggacatcaatgacaatgaccccgtgctcctcaatctgccaatgaacatcacc
ctcagtgagcacgccccggtctccagcttcgtcacacgcatccttgcccgggatgcagac
cagggcccgaacgccctccttacctttgacataactgctggcaacaaagagagcgccttc
tacatcaacagcaccaccggcatcatctacgtaaaccgccccttggacagggagcgggtg
gcagagtacaggctgaccatcacggtgaaggacaaccctgagaacatccgcaatgccagg
cgggattttgacctgctggtcatttccatagcggatgaaaacgacaaccaccccctcttc
acccagagctcctaccaggccgaggtgatggagaactcgcccccggggactccagtcacc
atgctcaatggacccatcctagctttggacggtgaccagggcagtaatgctatggtgacc
taccagctcttggcgacatccctggacctcttcattatcaacaataggacaggtgtcgtt
tcagtgaagcccggtgttgtgatagaccgtgaagctttgctggacccactgctggacttc
acgctggtggcccttgacactggggggctgaacagcaccgctagcctcacagtgaccatc
ctggatgacaatgacaaccgccctgtcttccagccagtgtccatcacaactcggctgaag
gaaaacagccccccaggcttttccgtcctccaggtgacagccacagatgcagacagcggc
ctcaacaagcaactggattacaggattgagggtgggggccaggacagattcctgattgat
gccaccacaggggtgatccgtgtggccaacctcagcattgaccgggaggagcgggatgcc
tatcggctgacagtggtggctgtggaccagggcacaccagctctctcaggcactgccacc
atcagcatcctcattgatgatgtcaatgactgccggcccgaattcatcaaccccatccaa
acagtcagcgtgcctgaatcagccacgcctggaactgtggtggctgaagtgaccgccatt
gaccgggacctccatccacgcctggagtactacctgctggagattgtggcccgtgatgac
acggatgcactggtgtccgaccagcaggaagcattcacagtggattttaggacaggagct
gtgaagatcaaaacccccctcaaccgggaacttgtggccacctacgaggtcaccatatca
gtccatgacaatgccagtgaagtcattgaccgctcagtcagcgtgcccaatgccaaactg
acagttaacgtcttggatgtcaatgacaacacgccacgcttccgtccattcggggtcacc
tatttcaccgagcgcatcctggagggagccacacaaggcaccacactcatctccatctca
gcagtggacccagacaaaggggccaatgggcagatcacctatgagctgctggacctgtcc
ccagaaggctatgcctgccttgaagatcaatcggcagggaaggtcgtggccaacaggaca
gtggactacgaggaggtgcagtggctgaacttcactgtccgagcttccgacaacggctct
ccccgcagatccgctgagatccctgtgtacctccagatagtggacgtcaatgacaacaac
cccatcttcagccagccgtcctaccagaaagctgtctttgaggacgtaccgttgggtaca
gtcatcctgagggtcaaggccacggatgcggattctgggcgctttgctctcatccagtac
agcctaggggatggagagggcaagtttgggataaatcctgacacgggtgacatctacgtc
ctgtcagccctagaccgggagaagaaggaccactacacactgacagctgtggccagggac
aaccctggggacatctccagtaaccgtcgggagaactctgtgcaggtgctgatcaccgtc
ctggacatcaatgacttcaggccgcagtttagcaagagccagttcagcaccagcgtctac
gagaatgagccagcgggtacatcagtgatcaccatgaccgcaacagacctggatgagggg
gacaacggtgtggtgacctatagcattgagggtcccggagcagaggccttcaaaatcaat
aaagactctgggcttatcacatcccggcggcgcttgcagtcctatgagagattcaacctg
actgtggtggccacagacaaaggtcatcccccactctgggggaccaccatgcttcacatt
gaggtcattgacatcaacgacaaccgccctgtcttcgtccgcccacccaacggcaccatt
ctgcacatcaaggaggagatccctctgcgctccaacgtctacgaggtctatgccacagat
aaggatgagggcctcaatggggcagtactgtacagcctcctgaaaaccggagcgggaaac
aaggactgggaatatttcagcatcgatgctgtcagtgggctgatccagacggccatgcgg
ttggaccgggagaagcaagcgatgtacaatctgatcattgtggcctctgaccagggccag
ccagcctatgagacgatgcagcccctccaggtcgcactcgatgacattgatgacaatgaa
cctatcttcctcaggccacctagagacagtccccagtaccaggcactctccgttcctgag
cactcacagcctggcaccgtggtgggcaatgtcactggtgcggtggatgcagatgagggc
tccaatgccatcgtctactacttcatagcagctgggaaccgagagggcaacttccagttg
agccgggaggggaagctccaagtcctgcgtgacctggaccgcgagaaggagccctactac
tccatcatcgtcaaagcatccagccagaggaactggtccccaccccggggccagcgagca
ggcagagcacagccctgggacctcagcacagatctgacccttcaggaggtgcggatcttc
ttggatgacatcaatgaccagtccccccagttcaccaagtcagagtatacagcaggggtg
gccacagatgctaaggtgggatcagagctgatcaaggtcttggcagtggatgctgatgtg
ggcaacaacagcctagtcctgtacagcatcctggggatccgctacatcaagcagcactcc
aatgattctgaggaggtggccaacatcttcagcattggtactcttgatggcatcctaaga
acctttgatctcttcacggcctacaatcctggctactttgttgtggacatcatggcctct
gacctggtgggccacaatgacacagccattgtggggatctacatcctgcgggatgaccag
agagtcaaaattatcatcaatgagatccccgataaggtcaggcagtttgaggaggagttc
atcagtctgctttccaacatcacgggtgccattgttaacacggatgacgtgcagttccac
gtggacaagaaaggccgggtgaactttgcacagacagagctgctgatccatgtggtgaac
agggagaccaaccgcatcctggatgtggagcgggtgattcagatgatcgatgagaacaag
gagcagctgaggaacctcttcaggaactataatgtgctggatgtacagcctgccatcact
gcccgtgccccggacgacctctcagctctgcagatggcaatcattgtgctggccgtcctg
ctcttcctggctgccatgctcttcatcctcatgaactggtactaccgcacagtgcacaaa
aggaagctgaaagccattgtggcgggctccacagggaatagaggcttcatggacatcatg
gacatgccaaacaccaacaagtactcctttgatggggccaaccccgtgtggctggacccc
ttctgccggaccatggaactggcggcacaagcagaacatgaagatgaccttcctgagaac
ctgagcgagatcactgacctctggaacagcccagccaggacccatggcaccttcggccga
gagccctcagctgccaagcctgaggatgaccgctacctgcgagccgccatccaggagtac
gacaacattgccaagctggggcagatcatgcgcgagggacccattaagctcatccagaag
gacctggaggaggacgaggagcgctgccccagccagggcagcctgcgctttcggcacaag
cagccagtagagctgaaaggccccgatggcatccacgtggttcatggcagtacaggtaca
ctgctggcttctgacctcaacagcctccctgaagacgaccagaaggtgctggggcgctcg
ctggagactctgactgccgactgcggggcttacgaccacaatgcccgcaccgagtcggcc
aaatccacccccctgcacaagatgagggaggtgatcatggagagcccattggagatcact
gagctatga
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