Phasianus colchicus (Ring-necked pheasant): 116235084
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Entry
116235084 CDS
T07365
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcoc04121
]
116235084 (ZSWIM8)
Ubiquitin system [BR:
pcoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
116235084 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
116235084
NCBI-ProteinID:
XP_031458879
Ensembl:
ENSPCLG00000011017
UniProt:
A0A669PYL4
LinkDB
All DBs
Position
Unknown
AA seq
1822 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDHFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRVRAVKDPLQIGFHLSATVVPPQMMSPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTDQCLNYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPQRRRDLCSQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEEAY
PIPGITYSSTDKKNSFCWVKAIQQRSCRLQCAETACEAGRAHGQEPGGPCLQPGDRLRPS
PQEPAVRPKELTGKRKVVSETPQRVLRRLSAEGDKAVYKSAVGKAKLPVSKGLTSKHSGK
RRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFTESPLSRSYRDAFEEDGGVYFSEG
PEPSVRSSSTGKKSTKDPVGETGSGDDDLTSADENSGGVSLKPEEVGENGAAGGGDDGEE
EDDYQVYYLNPQEVAKEDDDKAEGGNEEEQDIFAGIKPLEQENRMEILFACAEALYAHGY
SNEACRLTVELARDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLTVLS
ERLEYHNLAFRIGMFALELQRPPASTKALEVKLAYQESEIAALLKKIPLVTNEMNTIRGR
AEELREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGCRPPSRNWNNEMPGDEELGFEAA
VAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHK
PQTLSSFYSSSKPTVANQKSPSKHAAQSTAAIQQLPGTSVAQQAGVSPAVQSSPETFVEK
SSQESSQRSPCEPAGESTVLKQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTGMASID
SSAPETTSDSSPTLSRRPLRGGWAATSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGA
RAKTVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSS
GGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILV
ECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQ
DNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQIVGGTPAQREGATGCSASGAR
AASEAARGLTDNRVTTEPTTVTVAAAVTASATVVPVISMGSTMYQQHTMAGPAMAHTHTQ
GLHPYTTLQTHIPCNPQYIGHTIQHMPRPAVFPVPGSAYPQSVHPAFIGAQYPYSVTTPS
LAATAVSFPGVPVPSMTQIAVHPYHSETGLSLSSNVAIGSVHAGSTFPAIQGTSLTSLSS
QPNSLVTGGFPAEDEQHSQPVSPQGLHYLHSAYQVGMLALEMLGRRTQSDHPNNFSRSPP
YTEDVKWLLGLAAKLGVNYVHQFCVGAAKGVLNPFVLQDIIMEALQRLNPAHVHNHLRTP
AFHQLVQRCQQVYLQYIHYRLIHLAPADYDDFVNAIRSARSAFCLTPVGMMQFNDILQNL
KRGKQTKDLWQRVSLEMTTFSP
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgtttgcggagtgggaggacggggagaggttctccttcgaggactccgat
cactttgaggaggactccctttgttccttcatctcagaggcggagagcctttgccagaac
tggagaggatggcggaagcaatcggccggacccaattctcccactgtcaaaatgaaagat
gggctggtgatcccattggtggaactgtctgcaaaacaggttgcatttcacattccattt
gaggtcgtggaaaaagtttatcctccagttcctgagcaactacagcttcggattgccttc
tggagtttccctgaaaatgaggaagatattagactatattcttgtttggctaatggcagt
gcagatgagttccagagaggggagcagctgttccgagtgagggcagtcaaagaccctctc
cagataggtttccatctgagtgccactgtggtacccccgcagatgatgtctcccaaaggt
gcatacaacgtggcagtgatgtttgaccgatgcaggatcacatcgtgcagttgtacctgt
ggtgctggggccaagtggtgtgctcacgtcgtggcgctctgtctcttccggatacacaac
gcatctgcggtatgtttacgagcacctgtttctgagtccttgtctcggctacaaagagac
caattgcaaaaatttgctcagtacctaatcagtgaacttccacaacagattcttccaact
gctcagcgtttgctggatgagctgttatcttctcagtcaactgcaatcaacacagtgtgt
ggagccccagatcccactgctggaccctctgcatcagatcaaagcacctggtacctagat
gaatctaccctgagtgacaacataaagaaaacccttcataaattctgtgggccctctcct
gttgttttcagtgatgtgaattccatgtatctctcttccacggagcctccggctgctgct
gagtgggcctgtcttctgcgtcccctgcgagggagagagcctgagggaatctggaaccta
ctttctattgtgcgggagatgtttaagagacgggacagcaatgctgctcctttgctggag
attctgactgaccagtgtctgaactatgagcagataaccggctggtggtacagtgtgcgg
acatctgcgtcacacagcagtgctagcgggcacacaggacgtagcaatgggcagtcagaa
gtagctgctcatgcctgtgcaagtatgtgtgatgagatggtggttctttggaggctggct
gtccttgacccaactataagtccacagaggcgcagggacctttgctcccagctcaggcag
tggcagctaaaggtcatagataatgttaagagaggtcagcacaagaaatcactggagaag
ctattccagggtttcaagccagcagtggaagcctgttacttcaactgggaggaagcttat
cctatccctgggatcacctatagcagtactgacaagaaaaactcattctgttgggttaag
gccatccaacagaggagctgccggttgcagtgtgcggaaactgcttgtgaggctggtaga
gcccatggacaggagcctgggggaccatgtctgcaacctggggacaggctgcgtccctca
cctcaggagccagcggttcgtccaaaggaacttactggaaagagaaaagttgtctctgaa
acaccccagagagttctgcgacgactttcagcagaaggtgataaagctgtgtataagagt
gcagtgggcaaagctaagttgccagtgagcaaaggtttgaccagtaagcatagtgggaaa
cgccgcatgagcagtgaagacagctccctggagccagacttagcggagatgagcctggat
gacagcagcttggctctgggtgcagaagccagcaatacatttagttttacagaaagccca
ctgagcaggagctacagggatgcctttgaggaggatggtggggtgtacttctctgaagga
cctgagcccagtgtcaggagcagttccacgggcaagaaatcgaccaaggatcctgtggga
gagacaggtagtggtgatgatgacctgacttctgcggatgagaacagcggtggtgtgagc
ctgaagccagaagaagtaggagagaatggtgcagcaggtggaggggatgacggagaagag
gaagatgattaccaggtatattatctgaatccacaagaggtagccaaggaagatgatgac
aaagctgaagggggaaatgaagaggagcaggatatatttgctggtataaagcctctggag
caggagaaccggatggagatcctgtttgcttgtgcagaagccctgtatgcacatggatac
agtaatgaagcatgtcgcttaactgtagaacttgccagggacctattagccaaccctcca
gatctcaaagtggagcagccaccaactaagggcaaaaagaacaaggtatcaaccagcaag
caaacatggatggcaaccaacaccttgtccaaagctgctttcctgctgactgtattgagt
gagcggctggagtaccacaacctggccttccgaataggaatgtttgctctggagctgcag
agaccgcctgcctctacaaaggcactggaggtgaagctggcatatcaggagtctgagatt
gcagccctcttgaagaagattcccttggtcactaatgagatgaatactattcgaggaaga
gctgaagaactgcgagaaggcacattatgtgattatcgtcctgtcctgcctctcatgttg
gctagctttatatttgatgtcctgtgcactccagtggtttctcctacaggctgcagacct
ccaagtcgcaattggaataatgaaatgcctggagatgaagagcttggttttgaagcagct
gttgctgctcttggcatgaagacaactgtcagtgaagcagaacatcctctgttgtgtgaa
ggcactcgaagggagaaaggagatctggcactagctctgatgattacctacaaggatgat
caatcgaagctgaagaagattttagacaaacttctggacagagagagtcagactcacaag
ccacagactctgagttccttctactcttccagcaagcctacagtagcaaaccaaaaatct
ccttccaaacatgctgcccagtccactgcagccatccagcagcttccagggacttcagtc
gctcagcaagctggtgtaagcccagcagttcagagcagtcctgagacttttgtggagaag
agttcacaggagagctctcagaggtccccctgtgagccagctggggaatccactgtcttg
aaacaggaaggaaaggtccccagtcgtctggcccttggaaaccgaggtggatacaacggg
agatgctggggttcacctgtcaggcagaagaagaaacacacaggcatggctagtattgac
agcagtgctcctgaaactacctctgacagttctccaacgctcagtcggcgtcctctacgt
gggggatgggcagcaacatcctggggccgaggacaagacagcgacagcatcagtagttct
tcaagtgattcactgggatcttcctcttccagtggcagtaggagagccagtgggggagcc
cgtgcaaagactgtggaagttggcagatataaagggaggcggctggaaagccatgctcct
catgtcccgaaccagccttcagaggcagctgcccacttctactttgaattggccaagaca
gtccttatcaaagcaggtggaaacagcagtacctccatcttcacccacccttcctccagt
ggtggacaccagggaccacaccgcaatcttcacctctgcgcctttgagattgggctgtat
gcactagggctgcacaactttgtgtctcccaactggctctctcgaacttactcctcccat
gtctcctggatcacagggcaggccatggagattggtagtgcagccctgaacatcttagtg
gagtgttgggatggacatctgacccccccagaggtggcatcgttggcagacagagcctcg
cgggccagagactccaacatggtgcgggcagctgctgaactggcactcagctgcctgccc
catgcccatgccctgaatccaaatgagatccaaagggctctggtgcagtgcaaggaacag
gacaatctgatgctggaaaaggcctgtatggcagtagaagaggcagccaagggaggtggc
gtttacccagaagttctctttgaagtagctcaccagtggtactggctttatgaacagatt
gttggtgggactccagcccagagagaaggtgccactggctgcagtgccagtggtgcacgg
gctgcatcagaagcagcacgtgggttgacagacaaccgggtgaccactgagccaaccacc
gtaacagtggcagctgcagtaaccgcatcagcaacggtcgtgccagtgatctctatgggg
tcaaccatgtaccagcagcatacaatggcaggaccggcaatggcgcatacacacacccag
ggcctccacccttacaccacccttcagactcacattccctgtaatccccagtatattgga
cacactatccagcacatgccacgtccagctgtcttcccagtgcctggctcagcgtatcca
cagagtgtccatccagcattcataggagcacagtatccctattcggtaacaacaccatca
ttggcagctacagcagtgtcgttccctggtgtgccagtcccgtccatgacccagatagca
gtgcatccctaccacagtgaaactggactgtcactgtcttccaatgtagcaataggaagt
gtccatgcaggatcaacgttcccagcgattcaggggacttccttgacatctctgtcctca
cagcccaactcccttgttacaggggggtttcctgccgaggatgagcagcacagtcagcct
gtgagcccccagggtctgcactacctccactccgcataccaagttgggatgctggctctg
gagatgcttggccgaagaactcagagcgatcatcccaacaacttctcccgcagtccaccc
tacacagaggatgtaaaatggctccttgggttggctgcaaagctaggtgtaaactacgtg
catcagttttgtgtcggtgcagccaagggagtgctgaacccttttgtgcttcaggatatc
atcatggaagctctacagaggctcaaccctgcacatgtgcacaaccatctgcgcacccca
gccttccaccagctggtgcagaggtgccagcaggtctacttgcagtacatccattaccgg
ctgatccatctcgctccagctgactacgatgattttgtgaatgccatccgcagcgccaga
agcgccttctgcctgactcccgtgggcatgatgcagtttaatgatattctccagaacctg
aagcgcggcaagcagacaaaggatctgtggcaaagggtctctctagaaatgaccaccttc
tcaccgtga
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integrated database retrieval system
