Phasianus colchicus (Ring-necked pheasant): 116235455
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Entry
116235455 CDS
T07365
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116235455 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116235455 (DHX36)
03012 Translation factors [BR:
pcoc03012
]
116235455 (DHX36)
Enzymes [BR:
pcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116235455 (DHX36)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116235455 (DHX36)
Translation factors [BR:
pcoc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
116235455 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
AAA_23
PhoH
Sir1
Motif
Other DBs
NCBI-GeneID:
116235455
NCBI-ProteinID:
XP_031459514
Ensembl:
ENSPCLG00000010963
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MSYEQRRDWGRGRGRGGDGGSSAASSGGGGHGGRGGGRGRHPSHLKGREIGLWYARKQGQ
KSKEADRQQRAVVRMDERREEQIVQLLNAVQPRAEKEQEAMSWWSGDEDGHAPEQPPKVK
PAAEQAEKAPVKRRPVLEKTFLDQDVEYLFEKSDQDVDLDEQLKEDLRKKKSDPRYIEMQ
RFREKLPSYGMRQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCRIVC
TQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQS
DKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDNC
PMIHIPGFTFPVVEYLLEDVIEKLRYTPENTDRRPRWKKGFMQGHISRPEKEEKEEIYRE
RWPEYLRQLRGRYSASTIDALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNI
SSLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITID
DVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRAS
LLDDYQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALD
KQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVA
DARRKELSKNTKSDHLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQF
AEHLLAAGFVNSRDPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCT
KTDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQK
DKDQDTIAVDEWIVFQSPARIAHLVKNLRQELDDLLQEKIENPHPVDWNDTKSRDTAVLT
AIIDLITTQENESARNFAPRFQSERYS
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcagcgccgcgactggggccggggtcggggccgcggcggcgatggcggc
tcgtctgccgcgtcctccggcggcggggggcacgggggccgcggcggcgggcggggccgc
catcccagccacctcaagggccgcgagatcgggctgtggtacgcgcggaagcagggccag
aagagcaaggaggcggaccggcagcagcgcgccgtggtgcggatggacgagcggcgggag
gagcagatcgtgcagctgctgaatgccgtgcagcccagggccgagaaggagcaggaagcc
atgtcgtggtggtccggggacgaggacggacatgctccagaacagcctccaaaagtgaaa
ccagctgctgaacaagctgaaaaagctcctgtaaaacggcggccagtcttggagaaaaca
tttcttgatcaggatgtggaatacctctttgaaaaaagtgatcaagatgtggatttagat
gagcaacttaaagaagacttaagaaagaagaaatctgatcctagatacattgaaatgcag
agatttcgagagaaactcccttcgtatgggatgagacaggaacttgtaaacctcataaac
aataatcgagtgactgtaataagtggtgaaaccggctgtggaaagacaacacaagtgaca
caatttatcctggatgattacatagagcgagggaaaggctccacgtgcagaattgtttgt
actcaacccaggaggatcagtgctatctcagtggctgagagagttgcagctgaaagggca
gaagcatgtggtaatggcaagagtacaggataccagattcgtctacagagtcggttacca
aggaaacaaggttcaattctgtactgtaccacaggaattgtccttcagtggctccagtca
gataagcatttgtccagtattagtcacgtagttcttgatgaaattcacgaaagaaatctt
caatcagatgttttaatgagcattataaaagaccttttgaatgttcgtttggatctgaaa
gtaatcttaatgagtgctactttaaatgcagagaagttctcagagtattttgataactgt
ccaatgattcacatacctgggttcacttttcctgtggtggaataccttcttgaagatgta
attgagaagttgagatatactccagaaaacacagaccgtcggccacggtggaagaaaggt
ttcatgcaaggacatataagcaggccagaaaaagaagaaaaagaagaaatctacagggaa
cgatggccagaatatttaaggcagctgcggggcaggtattcagcaagtactatagatgcc
ttggaaatgatggatgatgacaaggttgaccttgacctaatagcagcacttatcaggcac
attgttttggaagaagaggacggtgcaattctggtgtttcttccagggtgggacaacatt
agctctctgcatgatctcttgatgtcacaagtcatgtttaagtcagataggtttattatc
atccctttgcattcattgatgcctacagttaaccagactcaggtgtttaagaagaccccg
ccgggagtcaggaaaattgtgattgctaccaacattgcagagaccagcattacaatagat
gacgtggtgtttgttatagatggtggaaagatcaaagaaacccactttgatacacagaac
aacattagcacaatggctgcagagtgggttagcaaagctaacgccaagcagaggaaaggt
cgagcaggaagagtgcagccaggccactgttaccatctgtacaatgggctgcgtgccagc
cttctggatgattatcagttaccagagatcttgaggacacctttggaagaactctgctta
caaatcaagattctaaagcttggtggaattgcttattttctgagtaaactcatggatccg
ccatctcgtgatgctgtaatgctggccattaatcatctaatggagctgaatgctttggac
aaacaagaggagctgactccactcggtgtgcatttagcacgattaccagttgagccacat
attggaaaaatgatcctctttggagctttgttctgttgcttggatccagtacttacgatt
gcagcaagccttagcttcaaagacccttttgtcattcctctgggcaaagagaaagtggca
gatgccagaagaaaggagctgtcgaagaatactaaaagtgaccatctgactgtggtgaat
gctttcacaggctgggaagagactcgtcggcgtggattccgaactgaaaaagactattgc
tgggaatatttcctgtctccaaatactctccagatgctgcataacatgaaaggacaattt
gctgagcatctgcttgcagctgggtttgtgaacagcagagaccccaaggatcccaagtct
aataccaactcagataatgagaagttgctcaaagctgtcatctgtgctggcttgtatcca
aaagttgcaaagatccggccaagctttagcaaaaagaggaaaatggtgaaagtttgcacc
aagacagatggaacagtgaatattcatcctaaatcagttaatgtggaagaaacagagttc
cattataactggctggtgtaccacttgaagatgagaactagcagtatatacctgtatgat
tgtacagaagtgtctccatactgtctgctgttcttcggaggagacatatccattcagaag
gataaagatcaggacaccattgctgtggatgaatggatagttttccagtctccggcaaga
atagcacacttagttaagaatttaagacaagagctcgatgatcttctccaagagaaaata
gagaacccccaccctgtggactggaacgatactaaaagcagggacacagcagttctgaca
gctattatagacttaatcaccacccaggagaatgaaagtgccaggaatttcgctcctcga
ttccagagcgagcgctacagctga
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