Phasianus colchicus (Ring-necked pheasant): 116235583
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Entry
116235583 CDS
T07365
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc00100
Steroid biosynthesis
pcoc01100
Metabolic pathways
Module
pcoc_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
116235583 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pcoc01006
]
116235583 (FDFT1)
Enzymes [BR:
pcoc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
116235583 (FDFT1)
Prenyltransferases [BR:
pcoc01006
]
Terpene biosynthesis
Squalene/phytoene synthase
116235583 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
116235583
NCBI-ProteinID:
XP_031459660
Ensembl:
ENSPCLG00000011648
UniProt:
A0A669QJ66
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MELLRKWLGHPEDIYHLLRFKMGGYRAVMPRMDPDSLGLGLRTCYRYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTIEDDMTISLDVKVPMLIEFHSYLYQPEWKYMESKEKHR
QVLEDFPTISMEFRNLAKVYQDVISDICHKMGVGMAEFLEKKVDSQSEWDRYCHYVAGLV
GIGLSRLFSASELEDPIVGQDTELANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRY
TKKLSDLTKPENIDMAVQCLNELITNALRHVPDVLTYLSRLKNQSVFNFCAIPQVMAIAT
LAACYNNKQVFRGVVKIRKGQAVTLMMDATNMQSVKAIMYQYVEEIYQKIPSTDPSSNKT
QQIIASIRAMSLPSGPMASRHHYSPIYLSCAMLLAALSWQYLSTISKATEEYVQAGEN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgaggaaatggctggggcaccccgaggacatctaccacctgctgcgcttc
aagatgggcggctaccgggccgtcatgccgcgaatggacccggactcgctgggactcggg
ctccgcacctgttaccgctacctcaaccagaccagccgtagtttcgccgccgtcatccag
gcgctggatggagagctgcggcatgctgtctgtatattttacctagttctccgtgccctg
gacaccatagaggatgatatgaccatcagcttagacgtaaaggtcccgatgctgattgag
tttcactcttatctctatcaaccagagtggaaatacatggagagcaaggagaagcaccgg
caggtgctggaggacttcccaacgatctccatggagtttaggaatctggcaaaggtctac
caggatgtgatttctgatatttgtcacaagatgggtgttgggatggcggagttcttggaa
aagaaggtggattctcagagtgaatgggatcggtactgccactacgttgctgggctggtg
gggataggcctttccagactcttctctgcatcagagctagaagatcctattgtaggacag
gacacagagctagcaaactccatgggcctcttcctgcaaaaaaccaacatcatacgtgac
tatctagaagaccagctggaaggaagggagttctggcccagagaggtttggagcagatac
acaaagaagctctctgaccttaccaagccagagaacatagatatggctgtccagtgtctg
aatgagctcatcaccaatgctctccgccatgtccctgatgtcctcacttacttgtctcgc
ctgaaaaaccaaagtgtcttcaacttctgtgctatcccccaggtgatggccattgccact
cttgctgcctgctataataacaagcaggtgttcagaggggtagtgaagatccggaaggga
caagctgtcactctgatgatggatgctacaaacatgcaatctgtcaaagccatcatgtac
cagtatgtggaagagatctaccagaagatccccagcacagacccttcatccaacaagacg
cagcagatcatcgcctccatccgtgccatgagcctgcccagcggccccatggcctcacgc
catcactattcccccatctacctgtcctgtgccatgctcctggctgccctgagctggcag
tacctcagcaccatctctaaagccactgaagagtacgtccaggcgggtgagaactga
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