Phasianus colchicus (Ring-necked pheasant): 116235818
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Entry
116235818 CDS
T07365
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116235818 (PTBP1)
03041 Spliceosome [BR:
pcoc03041
]
116235818 (PTBP1)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
116235818 (PTBP1)
Spliceosome [BR:
pcoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116235818 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
116235818
NCBI-ProteinID:
XP_031460081
Ensembl:
ENSPCLG00000012547
UniProt:
A0A669Q481
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MDGIVQDITVGTKRGSDELFSTCVTNGPFIMSSNASSAANGNDSKKFKGDSRSAGVPSRV
IHVRKLPSDVTEAEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTTVTPV
LRSQPIYIQFSNHKELKTDNSPNQARAQAALQAVNSVQSGNLALPAPAAAVDAGMAMAGQ
SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPMSAQHAKLS
LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPPLDQTMAAAFGAP
GIIPASPYAGAGFPPTFAIPQAAGLTVQNVHGALAPLAIPAAAAAAAAGRIAIPGLAGAG
NSVLLVSNLNPERVTPQCLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLN
GQKLHGKPIRITLSKHQTVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSAT
LHLSNIPPSIAEEDLKMLFSSNGGMVKGFKFFQKDRKMALIQMGSVEEAIQSLIDLHNHD
LGENHHLRVSFSKSTI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtccaagatataacagttggtacaaagcggggatctgacgagcttttc
tctacttgtgttactaacggaccctttatcatgagcagcaacgcttcttctgcagctaat
ggaaacgacagcaaaaaattcaaaggggacagcagaagtgctggggttccatccagagta
atccacgtccgtaagctccccagtgacgtcacggaggctgaggtcatctctctgggctta
ccttttggcaaggtcaccaaccttctgatgctgaaaggcaaaaatcaggctttcatagaa
atgaatacagaggaggcagccaacaccatggtaaactactacaccacagtcactccagtc
cttcgaagccagcccatctacatccagttctccaaccacaaggagcttaagacagacaac
tcaccaaaccaagcacgtgcccaagcagctctgcaagcagtgaactctgttcagtcagga
aacctggcactgccagctcctgctgcagctgtggatgcggggatggcgatggctggccag
agccctgtgctgaggatcattgtggagaatctcttctatcctgtcactctagatgttctg
catcagattttttccaaatttggtacagtcttgaaaataattacgttcacgaagaacaac
caatttcaggctctgttacaatatgctgaccccatgagtgctcagcatgccaaactgtct
ttggatggacagaatatctacaatgcctgttgtacgctgcgcatagatttctcaaagctc
acaagtctcaatgtaaaatataataatgacaaaagcagagattacacacgaccagaccta
ccttctggggataaccagcctcctcttgatcagaccatggcagctgcttttggtgcccca
ggaataatccctgcctctccatatgcaggagctggctttcctcccacctttgcaattcct
caggctgcaggcttgacagttcaaaatgttcatggagctctagctcctttggctatccca
gcagcagctgcagcggctgcagcaggacggattgccattcccggcctcgctggggcaggg
aactctgttctgctggttagcaatctgaatcctgagagagttacaccccaatgcctcttt
attcttttcggagtctatggtgatgtgcagagggtgaagattttatttaataagaaagag
aatgccctggttcagatggctgatggaaaccaggctcagcttgccatgagccatttgaat
ggccagaagctccatgggaagccaatccgtataacgttgtccaaacatcagacagtgcag
ctccctcgtgagggacaggaggaccaaggtctgaccaaggactatggaaattctccctta
caccgtttcaagaaaccaggctccaaaaacttccagaacatctttcctccttctgccact
cttcatctgtccaacattccaccttcaatagctgaagaggacctgaagatgttgttctca
agcaatggtgggatggtcaaaggcttcaaattcttccagaaggaccgtaaaatggctctg
atccagatgggctctgtggaagaagccattcaatccctcattgacctccacaatcatgac
ctgggtgagaatcaccacctgcgtgtgtccttctcgaagtccaccatttaa
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