Phasianus colchicus (Ring-necked pheasant): 116235951
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Entry
116235951 CDS
T07365
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoc03400
]
116235951 (PMS1)
DNA repair and recombination proteins [BR:
pcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
116235951 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
116235951
NCBI-ProteinID:
XP_031460272
Ensembl:
ENSPCLG00000018074
UniProt:
A0A669QLU3
LinkDB
All DBs
Position
Unknown
AA seq
920 aa
AA seq
DB search
MKQLSAETVRLLSSSQVITSVVSVVKELIENSLDACATAIDIRLENYGFDKIEVRDNGNG
IKVADVPVMAIKHYTSKINSSEDLERLTTYGFRGEALGSICCVSEVLVTTKTADDDISTQ
YVLDSNGHVTSQKPSHLGQGTTVTVLKLFKNLPVRKQFYSTNKKCKEELKKVQDLLIAYG
IIKPELRITFVHNKAAIWQKNRVSDHKMACMSVLGTAVMGSMVPFQHRCEDPEINLSGFL
PKPESDSSLTSLSSSERSFIFINDRPVHQKEILKLIRQYYSVLMQKDSARLYPVFFLNIT
VPASAVDVNLTPDKTEVLLQYKDCVLLAVENVLKSLYGPLPAAVSGEANKTDVTSEDMFV
HKARQTDVVVNEKEPSGNNDLHAHTSFLSFSSDVQSCQAGKNTEICLNHQKFSGDTVHSH
LEEKEASKNDAFQEGSLRLLCEEEQNGQNTTGIPSNSAPIDPGSKKDGGHLLSSDNAEDA
LVPEDLPEISAVNWSMGNAFKNSSGDNLEPVKVLIPGAGGAINKQSERSDEQSHDPQIPN
QTVKKRNIIDEKTGQVTGYDLIHGRTIRKSKSAFEHFIQEYRSKLFSENPRCSMKDILLK
IEELWKNLNEEEKHKYEIKAARDLERYKREASKAMQEAANRPVKEKEKQKPKLKTLLPNQ
QKLDKMLHFQIDKKPKCNKPVKVVTVPFSLSSCRPQFQKHEKSDSDKHELCLIRRQSFPD
IWILATEKKLMLLNPYRLEEALLRKRLLMNHILPVEKLDKPVVLSDSLLGESHYMDALHK
MQKDYQTLNGLSYLSDPRLVANGFQIKVIEGASASESYMEIEGMANCLSYYGVSDLKEIL
SAVVNRNAKEVYECRPLKVINYLEGEAVRLARQLPLHLSKEDVENTIYRMKQQLGRENKG
CVHGRPFFHHLTDIPEVNKP
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagctgtcagcagaaaccgttcgtctgctttcgagttctcaagtgattacatca
gttgtcagtgtggtgaaggagctgatagaaaactccttggatgcctgtgccacagctatt
gacattagactggagaattatgggtttgacaaaatagaagtaagagacaatggtaatgga
atcaaggttgctgatgttcctgttatggcaattaaacactacacctcaaaaataaactct
tctgaggatcttgaaaggttgacaacatatggtttccgtggggaagccctgggatcaatt
tgttgcgtatcagaggttttggtcacaacaaagacagctgatgatgatatcagcactcag
tatgttttggatagtaatgggcatgtaacttcccaaaagccttcccatcttggccaaggt
acaacagtaacagtcctcaagttgtttaagaatcttcctgtgagaaaacagttttactca
acgaataaaaaatgtaaggaagaactgaaaaaagtccaggacctcctgatagcatacggc
atcataaagccagaactgagaataacctttgtacataataaggcagctatttggcagaag
aacagggtgtcagatcacaaaatggcctgcatgtcagttctgggaacagccgttatgggc
agtatggtaccttttcaacaccgctgtgaagatcctgagataaatctttctggatttctt
ccaaaacctgagtcagacagctctttgacaagtctctcaagctcagaacggagttttatt
tttataaacgatcgtccagttcatcagaaggaaatattaaagttaattcgacagtactac
agtgtgctgatgcaaaaggacagcgcacgcttataccctgtgttctttctgaatattact
gtacctgcctctgctgtggatgtgaatttaacacctgataaaactgaagttctgctgcag
tataaggactgtgtcttacttgctgttgaaaatgtgttgaaatctttgtatgggccacta
cctgctgcagtctctggtgaagctaataaaacagatgttacctcagaagacatgtttgtt
cataaagcaagacaaacagatgtggttgttaatgaaaaggaaccatctggaaacaatgat
ctacatgctcatacttcattcctttcattcagcagtgatgtgcaaagttgtcaagcagga
aaaaacacagagatctgtttaaatcatcagaaattctctggtgatactgtacatagtcac
ctagaagaaaaagaggcttctaagaatgatgcctttcaagaaggttccttacgtttactg
tgtgaggaggagcagaacggacaaaatacaactggtattccaagtaacagtgctcctata
gatcctgggtctaaaaaagatggtggacaccttttgagttctgataatgctgaagacgcc
ttggtccctgaagacttacctgaaatctctgctgttaattggagtatgggaaatgcattt
aaaaactcctcaggagacaacctggaacctgttaaggttttaattcctggagctggaggg
gcaattaataagcaaagtgaacgtagtgatgaacaaagccacgacccacaaatcccaaat
caaactgtaaagaaaagaaatataatagatgagaaaactggacaagtaacgggttatgac
ttaattcatggtcgaacaataaggaaatcaaagtctgcatttgagcatttcatccaagaa
tatcgttcaaaattattttctgaaaatccgaggtgtagcatgaaggacatcctattgaaa
attgaagagctgtggaagaatttaaatgaagaagaaaagcacaagtatgaaataaaagct
gctagagacctggagcggtacaagagagaggctagcaaagccatgcaggaagcagcaaac
agaccggtaaaggagaaagaaaaacagaagcccaagctgaagactcttctacccaaccag
cagaaacttgacaaaatgttgcattttcaaattgataagaaaccaaagtgtaataagcct
gtgaaagtcgttacagtgcctttttctctgagttcctgtagacctcagtttcagaagcat
gagaagagtgattcagataaacatgagctttgcctgatccgtcgccagagttttcctgat
atctggatacttgctactgaaaaaaagctaatgttgctgaatccatatagattggaagaa
gccctgctgcgtaaaagattgctgatgaaccatatccttccagtagagaaactggacaag
ccagttgtgttatcagacagtcttcttggtgaatctcactatatggatgctcttcataaa
atgcagaaggattaccagacattaaatggattgagttatttgtcagatccaaggcttgta
gcaaatggcttccagataaaagtgatagaaggtgcttcagcttcagaaagctatatggaa
atagaaggaatggctaattgtctgtcgtattatggtgtttctgatttgaaagaaattctg
agtgcagtagttaacagaaatgcaaaggaagtgtatgaatgcagacctctgaaagtgata
aactacttggagggagaagcagtgcgtttagctcggcagctgcccttacatttgtcaaaa
gaagatgtagaaaacacaatttacaggatgaagcaacagcttggaagggaaaataaaggc
tgtgttcatggtcgtcctttttttcatcacttaacagatattccagaagttaacaagcca
taa
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