Phasianus colchicus (Ring-necked pheasant): 116236222
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Entry
116236222 CDS
T07365
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03022
Basal transcription factors
pcoc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116236222
09124 Replication and repair
03420 Nucleotide excision repair
116236222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoc03021
]
116236222
03400 DNA repair and recombination proteins [BR:
pcoc03400
]
116236222
Transcription machinery [BR:
pcoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116236222
DNA repair and recombination proteins [BR:
pcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116236222
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Zn_ribbon_GTF2H2
HscB_4_cys
Zn_ribbon_11
Motif
Other DBs
NCBI-GeneID:
116236222
NCBI-ProteinID:
XP_031460650
Ensembl:
ENSPCLG00000019206
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MWQSGVAAMDDEPERTKRWEGGYERTWEVLKEDESGSLKATIEDILFKAKRKRIYEHHGQ
VRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQMGLIVTKSK
RAEKMTELSGNPKKHIAALKKAVDMNCQGEPSLYNSLNLAMQTLKHMPGHTSREVLIVFS
SLTTCDPANIYELIKCLKAVKIRVSVIGLSAEVRVCTVLTRETGGTYHVILDESHYKELL
MHHVSPPPASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSEPCLTLDGYFCP
QCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYQGERYCQGCQAEI
KDQNVYVCKTCKNAFCVECDIFIHDSLHCCPGCIHEHPAPVSV
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagagcggcgtcgcggccatggacgacgagcccgagaggactaagcgctgggaa
ggaggctacgagaggacgtgggaagtactgaaggaagatgaatccggatcgctgaaagca
accatcgaggacatcctcttcaaggcgaagaggaagagaatctacgagcaccatggacaa
gtccggctgggaatgatgcgtcacctttatgtggttgttgatggatcaagaactatggag
gaccaagatttaaaaccgaacagacttacttgcactttgaagttactggaatattttgtt
gaagagtactttgaccaaaatcctattagtcagatgggcttaattgtaaccaagagtaaa
agagctgagaagatgacagagctttcaggtaacccaaaaaagcacatagctgctctgaag
aaagcagtggatatgaactgccagggagagccatctctgtataattctctaaatttggcc
atgcagactttaaagcatatgccaggacatacaagcagagaggttttaatagtcttcagt
agtcttacaacatgcgatcccgccaacatctatgagctaatcaagtgtttgaaagcagtt
aagatcagagtgtctgtcattggtctaagtgctgaagttcgagtctgtacagtactgacc
cgagaaactggaggaacataccacgttattttagatgaaagtcattataaggaactgctg
atgcatcatgttagtcctccacctgccagttcaagttcggagtgctcccttattcgaatg
ggttttcctcagcacaccattgcttccctttctgaccaagatgcaaagccatccttcagc
atggcacaactggaaaacaacagtgagccatgtcttacattggatgggtatttctgtcct
cagtgcagagccaaatactgtgaacttcctgtggaatgcaagatctgtggtcttacacta
gtgtctgcacctcatctggctcggtcttaccaccacttgtttcctttggatgcctttcag
gaaattccgctggaagaatatcagggagaacggtattgtcaaggctgccaagcagaaatc
aaagatcaaaatgtttatgtatgcaaaacgtgcaagaatgcattttgtgtggaatgcgac
atatttattcatgattccctgcactgctgtcctggctgtattcatgagcaccctgctcct
gtatctgtatga
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integrated database retrieval system
