Phasianus colchicus (Ring-necked pheasant): 116236603
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Entry
116236603 CDS
T07365
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04137
Mitophagy - animal
pcoc04140
Autophagy - animal
pcoc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116236603 (HIF1A)
04137 Mitophagy - animal
116236603 (HIF1A)
04148 Efferocytosis
116236603 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoc03000
]
116236603 (HIF1A)
Transcription factors [BR:
pcoc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116236603 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
116236603
NCBI-ProteinID:
XP_031461175
Ensembl:
ENSPCLG00000018420
UniProt:
A0A669QJW7
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MDSPGGVSDKKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIM
RLTISYLRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCM
GLTQFDLTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGR
TVNIKSATWKVLHCTGHIRVYDTCNNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECM
LKPVESPEMKTTKIFSKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDE
QQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNT
ETLELSFTMPQVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMANEFKLELVEKLFAI
DTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESNSSGSQNAATITILQQT
QTPSTAADEIKPVAERVDDVKALIVPSSPVHVINDTSSAPASPYSGNRSRTASPIRAGKG
TLEQTEKSCPGAPSLITVTLNKRSTAMDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIG
SLFQQTGDRGGNASLAWKRVKACKTNGHNGVEQKTIILLSTDIASKLLGQSMDESGLPQL
TSYDCEVNAPIQGNRNLLQGEELLRALDQVN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggacagccccggcggcgtcagcgacaagaagaggattagttctgaacgcaggaaagag
aagtcaagagatgcagctagatgccgaagaagcaaggaatcagaagtgttctatgaactt
gctcatcagctgccccttccgcacactgtgagtgcccaccttgacaaggcctccattatg
aggctgaccatcagctacctgcgcatgaggaagctgctggatgctggtgagctagagaca
gaagccaaaatggagaaggagctgaactgtttctacttaaaagctcttgatggatttgtt
atggtgctttctgaggatggggacatgatttacatgtctgaaaatgtgaacaagtgtatg
ggactcactcagttcgatttgacggggcacagtgtatttgatttcactcatccatgtgac
catgaagagctgagagaaatgcttacacacagaaatggtcctgtgaaaaagggcaaagag
caaaacacggagcgcagcttctttctcagaatgaagtgtacactgaccagcaggggaaga
acagtgaatataaagtctgctacatggaaggtactgcactgcactggacacatacgtgta
tatgacacgtgcaataatcaaactcactgtggctacaagaagcctcccatgacgtgcttg
gtgttgatatgtgaaccaattcctcacccatcaaacattgaggtccccttggacagtaaa
acgttcctcagtcgtcacagtcttgatatgaagttttcctactgtgatgaaagaattaca
gagctgatgggatacgagccagaagaactcctgggtcgttcaatctatgagtactatcat
gcgctggattctgatcatctgaccaaaacacaccatgatatgttcacaaaaggccaggtg
acaacgggacaatacagaatgcttgctaaacaaggtggctacgtctgggttgaaactcaa
gcaactgttatatacaacactaagaattctcagccacagtgcatagtatgtgtaaactat
gtgttgagtggaattgttcagaaggacttgatattttcccttggacaaactgagtgtatg
ctgaaaccggtggagtctcctgaaatgaaaacgaccaaaatattcagcaaagatgacctg
gatgataccaacagcctttttgaaaaacttaagcaggaaccagatgctttaactgtactg
gctccagctgctggggacacaattatctccctagatttcagcagcaatgagtctgatgaa
caacaatgtgatgaagttcctttgtataacgatgtaatgctcccctcatccagtgagaaa
ttgcagaatataaatatggcaatgtccccactacctgcctctgaaactacaaagccactt
cgtagcaatgctgatcctgcactcaatagagaagttgtatcaaagctggagccaaacaca
gagacgctcgaactttcttttaccatgcctcaggtgcaagagcaaccaaccagcccttct
gatgcaagtaccagccaaagttcacctgagcccagtagccccaatgactattgctttgat
gtggataatgacatggctaatgaattcaaactggaattagtggagaagctctttgcaata
gatacagaagcaaaaaatccattctccactcaggagactgatttagacttggaaatgttg
gctccttacatcccaatggatgatgacttccagctacgctcctttgatcagctatctcca
ctggaaagcaattcttctggctctcaaaatgcagccaccattaccatacttcagcagact
cagacaccatcaactgctgctgatgaaataaaaccagtggcagaacgtgtggatgatgtg
aaggcactaattgttccatcatctcctgtccatgtaataaatgacacaagtagtgcccca
gcatcaccttacagcgggaacaggagtcgaactgcatctccaatcagagcaggaaaagga
acattggaacagacagaaaaatcttgtccaggagcacccagtttgataacagtcacactg
aacaaaagatctactgcaatggatgaagaactaaatccaaagatgctagctttgcataat
gctcagagaaaacgaaaaatggagcatgatggttcactttttcaggcagttggaattggg
tctttattccagcagacaggtgaccgtggaggaaacgcatcgcttgcttggaaacgtgta
aaggcgtgcaaaacgaacggtcacaatggagtggagcaaaagacaatcattctactatca
actgacatagcgagtaaacttctagggcagtcgatggatgagagtggactaccccaactc
acgagttacgattgtgaagtaaatgctcccatacaaggcaacagaaacctgctacagggt
gaagaactgctcagagctctggatcaagttaactga
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integrated database retrieval system
