Phasianus colchicus (Ring-necked pheasant): 116236675
Help
Entry
116236675 CDS
T07365
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03420
Nucleotide excision repair
pcoc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116236675 (ERCC8)
09124 Replication and repair
03420 Nucleotide excision repair
116236675 (ERCC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcoc04121
]
116236675 (ERCC8)
03400 DNA repair and recombination proteins [BR:
pcoc03400
]
116236675 (ERCC8)
Ubiquitin system [BR:
pcoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116236675 (ERCC8)
DNA repair and recombination proteins [BR:
pcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
116236675 (ERCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_TEP1_C
Beta-prop_EML
ANAPC4_WD40
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
116236675
NCBI-ProteinID:
XP_031461309
Ensembl:
ENSPCLG00000018704
UniProt:
A0A669R2A4
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MLGFISARQAGLDDPLRLRRAESTRRVLNLELNKDRDVERIHGSGINTLDIEPVEGRYML
SGGSDGVIVLYDLENLSRKPNYTCKALCSVGRSHPDAHKFSVETVQWYPHDTGMFTSSSF
DKTLKIWDTNTLQPADVFQFEGTVYSHHMSPVATKHCLIAVGTKSPKVQLCDLKSGSCSH
ILQGHRQEVLAVSWSPRHEYVLATASADSKVKLWDVRRASGCLTTLDQHNGEKSKASSEA
VNTAHNGRVNGLCYTSDGLHLLTVGTDDRMRLWNSSTGENTLVNYGKVCNESRKGLKFSV
SCGCSPEFAFVPYKSTIAVYTVFSGELITMLRGHYNTVDCCVFQPNFQELYSGSKDCNIL
AWIPALREPVLDDVPEKSLRRQHLNPAYEDAWSSSDAED
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgttggggtttatttcggctcgtcaggccgggctcgacgatcccttgcggctgcgccgg
gctgagtccacccgcagggttctaaatttagaattaaataaagatagagatgtggaaaga
atacatggcagtggtattaacacccttgatattgagcctgttgagggaagatacatgtta
tcagggggctcagatggtgttattgttctttatgaccttgaaaacttgagcagaaaacca
aattacacatgtaaagcactttgttctgtgggaaggagccatcctgatgcacataagttc
agtgtggagacagtccagtggtatcctcatgatactggaatgtttacatcgagctcattt
gataaaaccttgaaaatatgggatactaatactttacaacctgcagatgtatttcagttt
gagggaacagtctatagccatcacatgtctccagttgctacaaaacattgtttaatagca
gttggtaccaaaagccccaaagtacagctctgtgacttgaagtctggatcctgttctcac
attctgcagggtcacaggcaagaagtactggcagtatcttggtccccacgtcatgaatat
gttttggcaacagcaagtgctgacagtaaagtaaaattatgggatgtgaggagagcatct
ggatgtctgactacacttgatcaacacaatggagaaaagtcaaaagcatcttctgaggca
gtaaacacagctcacaatgggagagttaatggtttatgctatacaagtgatggtcttcat
ctcttgactgttggtacagatgatcggatgagactttggaacagctctactggagaaaat
acgttggttaactatggcaaagtatgtaatgaaagtaggaaaggactcaaattcagcgtc
tcttgtggctgtagtccagagtttgcctttgtcccatataaaagtaccattgctgtttat
acagttttctcaggagaattgataactatgcttcgaggtcattataatactgttgactgc
tgtgtatttcaacctaactttcaggaactttatagtggtagcaaagattgcaatatcctt
gcatggataccagctcttcgagaaccagttcttgatgatgttccggagaagtctttgcgt
cggcagcacttaaatccagcatatgaagatgcgtggagcagcagtgatgctgaagactga
DBGET
integrated database retrieval system
