Phasianus colchicus (Ring-necked pheasant): 116236904
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Entry
116236904 CDS
T07365
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcoc04121
]
116236904 (PDZRN3)
Enzymes [BR:
pcoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116236904 (PDZRN3)
Ubiquitin system [BR:
pcoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
116236904 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Sina_ZnF
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-TRAF
Prok-RING_4
PDZ_Tricorn
zf-rbx1
U-box
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
116236904
NCBI-ProteinID:
XP_031461593
Ensembl:
ENSPCLG00000006394
UniProt:
A0A669PMS6
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MGFELDRFSGEVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPANCQRIS
AKELNHVLPLKSLILKLDIKCDNHARGCEAVVPLQHLGEHAETCDFSPAKCRNRGCRQVL
NLRDVEAHMRERCEARPAGLCEQGCGLMLTHGERRSGGHSCLRALRAHGAALQARAAALE
KALKKEALRAGKREQSLLSRLAAAQLELQVTALRYQKRFTQYSARLDALARARSASPGKG
EETKALTLVLHRDSGSLGFNIIGGRPCVDNQDGSASEGIFVSKIVDTGPAAKEGGLQIHD
RIIEVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRTPRTKIFTAPESQLVDVGTQTDIT
FEHIMALSKMGSPTPPVSVLDPYLLPEDHPSVHEYYDPNDYMGGIHQEMDRDELELEEVD
LHRVNSQDKLGLTVCYRTDDEDDTGIYVSEIDPNSIAAKDGRLREGDRIIQINGIEVQNR
EEAVALLSSEESKNISLLVARPEIQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTAS
MLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDDSTRNDESSEQENNADDHTTSSNTLG
SQKKLTYSHDTLGSGDMQFSNESFISADCTDVDFLGIPVDECERFRELLELKCQVKSANP
YSLYYHTSTLDMSKSDQESVDKELEMLNEELRNIELECLNIVRAHKMQQLKDQYREPWML
HNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLRR
TAEGINCQGNEGAVAYNVSQKNLFAGSESHESSTGKCHSAAKDPDTSKQMECKERKASDG
SKSPTQGQKSSGSYVSPYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSM
CKDFSASQNEPRMEWKVKVRSDGTRYITKRPVRDRLLRERAIKIKEERSGMTTDDDAISE
MKMGRYWSKEERKQHLVKAKEQRKRREFMMQSRLDCLKEQQGAEEKKEMNIIELSHKKMM
KKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgagctggatcgcttcagcggggaagtggaccccgacttcaagtgcaacctg
tgcaacaaggtgctggaggacccgctgaccaccccctgcggccacgtgttctgcgccggc
tgcgtgctgccctgggtggtgcagcagggcagctgccccgccaactgccagcgcatctcc
gccaaggagctcaaccacgtcctgcccctcaagagcctcatcctcaagctggacatcaag
tgcgacaaccacgcgcggggctgcgaggcggtggtgccgctgcagcacctgggagagcac
gccgagacctgcgacttctcccccgccaagtgccgcaaccgcggctgccgccaggtgctc
aacctgcgcgacgtggaggcgcacatgcgggagcgctgcgaggcgcggccggccgggctg
tgcgagcagggctgcggcctgatgctcacgcacggcgagcgccggagcggcggccacagc
tgcctgcgggccctgcgcgcccacggggccgctctgcaggcgcgggcggcggcgctggag
aaggcgctgaagaaggaggcgctgcgcgccgggaagcgggagcagtcgctgctgtcgcgg
ctggcggcggcgcagctggagctgcaggtgacggcgctgcgctaccagaagcgcttcacg
cagtacagcgcccgcctggacgccctggcccgcgcccgctccgcatcgcccggcaagggt
gaagaaactaaagcactgactctcgtccttcatcgtgactcaggctctcttggatttaat
attattggtggccgaccatgcgtggacaatcaagatggttcagcgagcgaaggaattttt
gtatcaaaaatagttgacactgggcctgctgctaaggaaggagggctgcaaattcatgac
aggattattgaggtcaatgggaaggatttatctaaagcaacgcatgagcaggcagtggaa
gcattcaaaacagccaaggagcccatcgtggtgcaggtcctgaggaggactccacgcacc
aagattttcactgctcctgagtctcagctggtggatgtgggcactcagacagatatcact
tttgaacacatcatggctctaagcaagatgggctcgcctaccccacccgtctcagtgctg
gacccatacctcctacccgaagatcatccatcagtacatgaatactatgacccaaatgac
tacatgggaggaatccatcaagaaatggaccgagatgagttagaattggaggaagtagat
ttgcaccgagtgaacagccaggacaagctcggtcttacagtgtgttacagaacggatgat
gaggatgacactggtatttatgtgagcgagatcgatcccaacagtattgctgcaaaagat
ggtcgactccgagagggggatcgcattattcaaatcaatggcatagaggtacagaaccga
gaagaagccgtagcacttctcagcagtgaagagagcaagaatatctccttacttgttgca
agaccagaaattcagctggatgaaggatggatggacgatgacagaaatgattttctggat
gacttgcacatggacatgttagaggagcagcaccaccaggcaatgcaatttactgccagc
atgcttcagcagaagaagcacgaggaagatggtggtaccactgacacagccactatttta
tctaaccagcacgagaaggacagtggcgtagggcgcacagacgacagcactcggaacgat
gagagctctgagcaagaaaacaatgcagatgatcacaccacttcctctaacactttaggg
agccagaagaagctgacatacagtcatgacacccttggaagtggcgatatgcagttcagc
aacgagtcatttatctcagccgactgcacagatgtcgacttccttggcatccctgtagat
gaatgtgagcgattccgggaactgctggaactcaaatgtcaggtgaagtctgccaaccct
tacagcctgtattaccataccagcactctggatatgagcaaaagtgaccaagaaagtgtt
gacaaagagctggagatgctgaatgaggagctgcgcaatattgagctagagtgcctgaac
attgtgagagctcataaaatgcagcagctgaaggatcagtaccgagagccctggatgctg
cataacagtggattccgcaactacaacacaagcatcgatgttcgcaggcatgagctctca
gacattacagagctcccagagaagtctgacaaggatagctcgagtgcatacaatacgggt
gaaagctgccgaagcactccgctcacactcgagatttctcctgacaactccttgcgtaga
actgcagaaggcatcaactgtcaaggtaatgagggagcagtggcatataatgtctcccaa
aagaatttatttgctggctcagaaagtcatgaatccagcactggtaaatgccattcagct
gcaaaagatcctgacactagcaaacagatggaatgcaaggagagaaaagccagtgatgga
agcaaaagccctactcaaggtcaaaaatcttctggctcctatgtctccccataccaccac
tctccatataagcatgctcatattcctgctcatgcacagcactatcagagctacatgcag
ctgatccaacagaaatcagcagtggaatatgcacagagccaaatgagtctggtgagtatg
tgcaaagactttagtgcaagccagaatgagccgaggatggagtggaaagtgaaggtcaga
agcgatggaacccgctacatcaccaagagaccagtcagggacaggttgctgagagaacga
gccataaagattaaggaagagcgcagtgggatgactactgatgatgatgccataagtgaa
atgaagatgggccgctactggagtaaggaagagcggaagcagcatttagtgaaagcaaag
gagcagaggaagagacgtgagtttatgatgcagagcaggctggattgtttaaaggaacag
caaggtgcagaagaaaagaaagagatgaatatcattgaactgagccacaaaaaaatgatg
aagaaaagaaataaaaaaatatttgacaactggatgacaatccaggaactgcttacccat
ggaacaaagtcaccagatggaacacgagtgtacaattccttcctgtcagtgactactgta
taa
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integrated database retrieval system
