Phasianus colchicus (Ring-necked pheasant): 116237091
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Entry
116237091 CDS
T07365
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoc03000
]
116237091 (SOX13)
Transcription factors [BR:
pcoc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116237091 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
116237091
NCBI-ProteinID:
XP_031461898
Ensembl:
ENSPCLG00000019429
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MSMRSPVSPHLELDGAGSMVNCSIKTEEKKESGYESPPGAAPSTEPHPNDPPGPPPREGT
DPQALPQESCSPAGDALEPRCSAFEPAVGSQEKLDFNKNLKEVMPTIEKLLSSDWKERLL
GRNAAETKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQM
ELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFTPSHQPLPVTQDPQIA
LPIQPIPCKPGESSPQGAGMPAGCPHPPTLPLFPAVDYPVQLLHSPPPPTLKRPSGSGHL
QMQETSQPLNLTAKPKGSELPSASSSPSLKMSSCQSLTPSHGAVRDLQSSPSNLPLGFLG
EGDAITKAIQDARQLLHGHSGAMEGALSHPYRKDHVGIDASPVKERMEETPTHRLDETLL
SCEMDGTRHFPESRNNNHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSM
TNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDAR
QGYLIGPQGSQLPPGSSDVLYPRPVGMQLPSPLMEHYLPRGVDPSMPVIVSARSLKEGDG
GGDDGHSVADGEMYRYSEEEDSEGEEKSDGELVVLTD
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccccgtttctccccacctggagctcgatggggcgggcagcatggtg
aactgcagcatcaagacagaggagaagaaggagagtggctacgagagcccaccaggggct
gcccccagcactgagccccatcccaacgaccccccaggaccaccaccaagagagggcaca
gacccccaggcattgccacaggaatcctgctcacctgctggtgatgctctggagccgcgg
tgctcagccttcgagccggctgttggcagccaggagaagctggacttcaacaagaactta
aaagaggtgatgccaaccattgagaaattactctccagcgactggaaggagaggctgctg
ggcagaaacgctgctgagaccaaagaagtgaagggaacccaggagagcctggcagagaaa
gagctccagctgctcgtcatgatcaaccagctgtccacgctgcgggatcagctcctgaca
gcccactcagagcagaagaacatggctgcaatgctctttgagaagcagcagcagcagatg
gagctggcacggcagcagcaggagcagattgcgaagcagcagcagcaactcatccagcag
cagcacaaaatcaacctgctgcagcaacagatccagcaggtcaacatgccctacgtcatg
atccctgccttcacccccagccatcagccccttcctgtgacccaggacccccagatagcg
ctgcccatccagcccatcccctgcaagccaggtgagtcgagtccccagggtgcaggaatg
cctgcggggtgccctcatcccccaacacttcctctgttccctgcagtggattaccccgtg
cagctgctgcacagccctcctcctcccacgctaaagagacccagcggctctggccacctc
cagatgcaggagacctcgcagccgctgaacttgacggccaaacccaaaggctccgagctc
cccagtgcctccagctcacccagtttgaagatgagcagctgccagtccctcacaccgagc
catggggctgtgcgagacctgcagagcagcccgtccaacctgcccttgggattcttgggc
gagggcgatgccatcaccaaagccatccaggatgcacggcagctgctgcatggccacagt
ggtgccatggagggagcgctgagccacccttaccgcaaggaccacgttggcatcgatgct
tcccctgtgaaggagaggatggaggagacacccacacaccgcctggatgagactctgctg
agctgtgagatggacggaacgcggcatttccccgagtccaggaacaacaaccacatcaaa
cggcccatgaacgccttcatggtgtgggcgaaggatgagaggaggaagattttgcaggcc
ttcccagatatgcacaactccagcatcagcaagatcctgggttcccgctggaaatcgatg
acaaaccaggagaagcagccctactacgaggaacaagcccggctgagccggcagcacttg
gagaaatatcccgactataagtacaaaccccgacccaaacgcacgtgcatcgtggagggg
aaacggctgcgcgtgggggaatacaaagcgctgatgaggaaccggcggcaggatgcccgg
cagggctatttaataggtcctcagggcagccagctgccccccggctcctcggatgtgctg
taccctcggccggtgggcatgcagctgccgtccccgctgatggagcattacctgccccgt
ggtgtggaccccagcatgcccgtcatcgtcagcgctcgtagcctgaaggaaggtgacggc
ggaggggacgacgggcactcggtggcggatggtgagatgtatcgctacagcgaggaggag
gactcggagggagaggagaagagcgatggagagctggtggtgctgacagactga
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