Phasianus colchicus (Ring-necked pheasant): 116237286
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Entry
116237286 CDS
T07365
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcoc04131
]
116237286 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcoc04147
]
116237286 (COPA)
Membrane trafficking [BR:
pcoc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
116237286 (COPA)
Exosome [BR:
pcoc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116237286 (COPA)
Exosomal proteins of bladder cancer cells
116237286 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
116237286
NCBI-ProteinID:
XP_031462193
Ensembl:
ENSPCLG00000018660
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGLDEEAENLKETFDP
EKETIPDIDPNAKLLQPPAPVMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDNV
GTEGWGEDAELQLDEDGFVDAGEGFGEEGLGKGQEEGGGWEVEEDLDLPPELDVPAGPAG
GAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVTNFGPYKQLFL
QTYARGRTTYQALPCLPTMYGYPHRNWKEAGLKNALPAVGLKLNDLIQRLQLCYQLTTAG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEH
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYCPEFQGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgttgactaaattcgagaccaaatcggctcgggtgaaagggctcagcttccaccccaag
aggccgtggatcctcaccagcctacataatggcgtcatccagctgtgggactatcgcatg
tgcacccttatcgacaagttcgacgagcacgatggacctgtgcgaggtattgattttcac
aagcagcagcctctgtttgtttctggaggtgatgactataaaataaaggtctggaattac
aaactgcgccgctgtcttttcactctgcttgggcatttggattacatccgcaccaccttc
ttccatcacgaatatccgtggatcttgagtgcttctgatgatcagaccattcgggtttgg
aactggcagtccagaacttgtgtctgtgtgctgacaggacacaaccactatgtgatgtgt
gcccagtttcacccctctgaggacctggtagtgtcagccagcttggatcagactgtacgc
gtttgggatatttctggcttaaggaagaagaacctgtcccctggagctgtggagtcggat
gtcagggggataactggggtggatttgtttgggacaacagatgcagttgtgaagcacgtt
cttgagggccatgatcgtggagtgaactgggctgccttccatcccacaatgccactgatc
gtgtcaggagctgatgatcgacaagtgaagatctggaggatgaatgaatcgaaggcctgg
gaggttgacacttgcagggggcattacaacaatgtctcgtgtgctgtctttcaccctcgg
caggagctgatcctcagcaattcagaggacaaaagcatccgtgtctgggatatgtcgaaa
cgcacgggtgtccagaccttccgccgtgatcacgatcgcttttgggtgttggctgctcat
cccaatctcaacctctttgctgcaggccatgatggtggtatgattgtgttcaaactggag
cgtgagcgtcctgcttatgcagtgcatgggaatatgctgtattatgtgaaggaccgattc
ctccgccagcttgactttaacagttcaaaagatgttgctgtcatgcagctgcgcagtggt
tccaagttccctgtgttcaacatgtcatacaacccagctgagaatgctgtccttctctgc
acaagagcaagcaacttggagaatagcacttatgacctatacaccattcccaaagatgca
gactcccagaatccagatgcccctgaagggaagcgctcctcagggctaacagctgtgtgg
gtagctcgtaaccgcttcgcagtcctggatcgcatgcattcgatcctcatcaaaaacttg
aagaatgagatcacaaagaaggttcaggtgccgaactgtgatgagattttctatgctggc
acagggaacctgttactgagagacgcagactccatcaccctctttgacgtgcagcagaag
cggactctggcttcagtgaagatctccaaggtgaaatatgtcatctggtcagctgacatg
tcccacgtagctctgctggctaagcatgccatcatgatctgcaacagaaagctggaatca
ctgtgtaacatccatgaaaacatccgtgttaagagtggtgcctgggatgaaagtggtgtt
ttcatctataccaccagcaaccacatcaaatatgctgtcaccacaggggatcatggcatc
atccgcacgctggacctgcctatctacgttactcgtgtgaaggggaacaatgtgtactgt
ctggacagagaatgtcgccccagggtcctcaccattgatcccacagagttcaaattcaag
ctggcactgatcaacagaaagtatgatgaggtgctgcacatggtgaggaatgctaagctt
gtgggtcagtccatcattgcctacctgcagaaaaagggttatcctgaggtggccctgcac
tttgtcaaggatgagaagacccgtttcagtctggcactggaatgtggcaacattgagatt
gctctggaggcagctaaggctctggatgacaagaattgctgggaaaaactgggagaagtg
gcactactgcagggaaatcaccagattgtggagatgtgctaccagcgcaccaagaacttt
gataggctctcgttcctctatcttatcactggcaacctggagaagcttcggaagatgatg
aagatagctgagatccgtaaagatatgagtggccactaccagaatgccttatatctagga
gatgtggcagagagagtgaggatcctgaagaactgtggacaaaagtccctggcctatctc
acagctgcaactcatggtctggatgaagaagctgaaaacttgaaggaaacatttgatcct
gaaaaggaaacgattccagacattgatcccaatgcaaaactactgcagcctcctgctcct
gtcatgcctctagataccaactggccattgctgactgtctccaaggggttctttgaagga
acaattgctagcaaaggcaaagggggtgccttggctgctgacatagatattgacaatgtt
ggtactgaaggctggggagaagatgcagaactacagctcgatgaagatggctttgtggat
gctggagaaggctttggagaggaaggtctgggtaaagggcaggaagaaggaggtggatgg
gaagttgaagaagacttggatcttcctcctgaactggatgtccctgctggtccagcagga
ggagcagaagatggcttctttgtgccacccaccaagggcaccagcccagctcaggtgtgg
tgtaacaattcacagcttcctgttgaccacattctggcaggttcctttgagacagcaatg
agacttctccatgaccaggtgggagtaacaaactttggaccctataagcagctgttcctg
cagacctatgcccgtggccgtacgacctaccaagctctgccatgtctgcctaccatgtat
ggctacccacatcgtaactggaaagaagctggcttgaagaatgctctcccagctgttggg
ctgaagctcaatgacctgattcagcgcttacagctgtgttaccagctcacaacagctggc
aagtttgaggaggctgtggagaagttccgctccatcttgctgagtgtgcccttgctggtg
gtggacaataaacaagagattgctgaggcccagcagctgatagccatttgtcgggagtat
attgtaggactctcaatggagatcgagcggaagaagctgcccaaggagaccttggagcac
cagaagcgaatctgtgagatggctgcctatttcacccactccaacctgcagcctgtccac
atgatcttggtactgcgcactgctctcaacctcttcttcaaactcaaaaacttcaagaca
gctgctacttttgctcgtcggctgctggagctgggtccaaagcctgaggtggcccagcag
acccgcaagatcttgtcagcatgtgagaagaatcccaccgacacctaccagctcaactat
gacatgcacaacccctttgacatctgtgctgcctcttaccgacccatctatcgtggcaag
cctgtggagaagtgtccactcagtggagcttgctactgccctgagtttcaggggcagatc
tgccgtgtcacaacagtgacagagattggcaaagatgtcattgggctgcggatcagcccc
ctccagttccgctga
DBGET
integrated database retrieval system
