Phasianus colchicus (Ring-necked pheasant): 116237553
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Entry
116237553 CDS
T07365
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03440
Homologous recombination
pcoc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116237553 (TOP3A)
03460 Fanconi anemia pathway
116237553 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcoc03032
]
116237553 (TOP3A)
03400 DNA repair and recombination proteins [BR:
pcoc03400
]
116237553 (TOP3A)
Enzymes [BR:
pcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
116237553 (TOP3A)
DNA replication proteins [BR:
pcoc03032
]
Eukaryotic type
DNA Topoisomerases
116237553 (TOP3A)
DNA repair and recombination proteins [BR:
pcoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
116237553 (TOP3A)
FA (Fanconi anemia) pathway
116237553 (TOP3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
116237553
NCBI-ProteinID:
XP_031462671
Ensembl:
ENSPCLG00000014658
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MRFASSRPGPRSGRKPENALTREQQRSGGSAGHHGSCSSSCCRALRQVVAGRENAPLFAT
EIARERLWRRLRGSRRRRADRPALRCSEEVEPRWGTSPGGRKQHNALVPWELSQLPVMNF
QARLLASCGVRMLPQPWRSFSWAAEGSALQRIRKVLCVAEKNDAARGIADLLSNSRMRRR
EGFSKFNKIYEYDYQMFGQNVTMVMTSVSGHLLAHDFKLPFRKWNSCNPLALFDAEIEKY
CPENYVDIKRTLEREVQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNIQVFRARFSEI
TLHAVRRACENLTQPDQKTSDAVEVRQELDLRIGAAFTRFQTLRLRKIFPDILADQLISY
GSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHDHEDGNVVFNWKRNRLFNHTACLVLYH
MCMEDPVATVVEVGSKPKSKWRPLPLDTVELEKLASRKLKINAKETMRIAEKLYTQGFIS
YPRTETNIFPKELNLSALVQQQTQDPNWGAFAQRILDQGGPTPRNGTKSDQAHPPIHPTK
YTANLQGSEQRLYEFIVRHFLACCSQDAKGQETTVEIDIANERFIAQGLMILARNYLEVY
PYEKWSDKVIPLYQKGSRFQPTTVEMVDGETSPPLLLTEADLIALMEKHGIGTDATHAEH
IETIKTRMYVGLTADQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKKD
KSIVLQQQVQKYKQVFIEAVARANKLDQALAQYFGEGTEIAEQEEVYPAMPVSIRKCPHC
NNDMVLKTKKNGGFYLSCMGYPACKTAVWFPDFVLDVAKDESICAVCKPHPVHRLKFKFK
RGSVPPTMPLEFVGCIGGCDQMLKELLDLRYSNRSSQSGQSASQQANQLQANNSFNRANS
ENRHVGGPTNMATGHLLYLSSTRAPRPAPSAASDDGNNAVVCNCGNEAMLLTVRKEGPNQ
GRQFYKCSASTCNFFLWSDQQSEDRSSAALRGSAPPQAFGARGPANSQRPVGKRGPEHFG
SSNNSNSGGSTVCRCDQPAITRTVQKDGPNKGRQFHTCSKPREQQCGFFQWADENVAPGA
SGDFSFNHFGSSGYSRELGSKAKRPSNLSQGATAKKPRTCSICHQPGHTKKTCPLDH
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttgcttcaagccgtcctgggcctagaagcgggagaaaaccagagaacgcactg
acgcgggaacagcagcgttctgggggctccgcggggcaccatgggagttgtagttcttcg
tgctgccgcgctttacggcaggtcgtagctgggagggaaaacgcgccactttttgcgaca
gaaatagcgcgggagcggctgtggcggcgactgaggggatcgcggcgccggagggcggat
cgccccgcgctgcgctgctctgaggaggtcgaaccgcgctgggggaccagcccaggaggg
aggaaacagcacaatgccttggtgccgtgggagctgtcacagttacctgtgatgaacttt
caagccaggcttcttgctagctgtggggtcaggatgctgcctcagccttggcgcagcttc
tcatgggctgcagagggttcagcactgcagaggatccggaaggtcctgtgtgttgctgag
aagaatgatgctgcccgaggaattgcagatctgctctccaacagcagaatgcggcggaga
gaagggttttccaagttcaacaagatctacgaatatgactaccagatgtttggccagaac
gttactatggtgatgacatccgtgtcaggacacttactggctcatgatttcaagctgcca
tttcgcaaatggaatagctgtaaccctctagctctctttgatgctgaaatcgagaaatat
tgtcctgagaattatgtggatattaagagaaccctggaacgagaagtccagcaatgccaa
gctctggtcatctggactgactgtgatcgagaaggagagaacatcggttttgagatcatt
catgtttgcaaagctgtaaagccaaacatccaggtattccgagcacgtttttcagagatc
acacttcatgctgtcagaagggcctgtgagaatctcacccagccagatcaaaaaactagt
gatgctgttgaagtcaggcaggaactggacctcaggataggtgctgctttcaccagattc
cagaccctgaggctccggaagatcttccctgatattttagcagatcagctgatcagctat
ggcagttgccagttcccaactctggggttcgtagttgagcgctttaaagccatccaagcc
tttgtccctgaagccttctataaaatcaaagtgacacatgatcatgaagatggcaatgtg
gtcttcaactggaagaggaaccggctctttaatcacacagcatgcctggtcctttaccac
atgtgtatggaggatcctgttgccactgttgttgaggttggaagcaagccaaagagcaaa
tggaggcccctgcccctggacacagtggaacttgagaagttggcttcccgcaaactgaaa
ataaatgcaaaggaaaccatgagaatagcagaaaaactctatactcaagggtttattagc
tatccccgaacagagaccaacattttccccaaggagctgaacctctctgccttagtacag
caacaaacacaggaccccaactggggagcatttgcacagaggatcttggatcagggtggg
ccaacccctcggaatggaaccaaatcagatcaggctcaccctcccattcatcccacaaaa
tacactgctaacctgcagggcagtgaacagagactatatgaattcattgtgcgccatttt
ttggcttgctgctctcaagatgccaagggacaagaaacaactgtggagattgacattgct
aacgagcgattcattgctcaaggacttatgatcctagcccgaaattatctggaagtttat
ccttatgagaagtggagtgacaaggttatcccactgtatcagaaagggtctcgctttcag
cccactacagtggagatggtggatggggaaaccagccctccattgctcctcacagaagcg
gatctcattgcactcatggagaaacatggcattgggactgatgccactcatgctgagcac
attgagacaattaagacacggatgtatgtggggcttacagcagatcagaggttcctccca
ggccacctgggcatggggctggttgaaggctatgattccatgggctatgagatgtccaag
cctgaccttcgagctgagctagaggctgatctgaagctgatctgtgagggaaagaaagac
aaatctatagtgttgcaacagcaagtccaaaagtataaacaagtcttcattgaggctgtg
gccagagccaacaagctggaccaggccctggctcagtatttcggagaaggcacagaaatt
gcagagcaagaggaagtctatccagcaatgcccgtttccattcggaagtgtccccattgc
aacaatgacatggtgctgaagaccaagaagaatggcgggttctatctcagctgcatggga
tatccagcttgtaaaactgcagtctggtttcctgattttgtgctggatgtggccaaggac
gagagcatctgtgctgtgtgtaaaccacatccagttcacagattgaagtttaaatttaag
agaggcagtgttccacccaccatgcccctggagtttgttggctgcattggaggatgcgat
cagatgctaaaagagcttttggacctgaggtactcaaacagatcatcccaatctggacag
tcagccagccagcaagccaaccagttgcaggcgaataattcctttaacagagcaaacagt
gaaaacaggcatgtaggaggtcccacaaacatggcaacaggacatctactttacttgagt
tcaacaagagcacctaggcctgctccttcagctgcttcagatgatgggaataatgcagtg
gtgtgcaactgtgggaatgaagccatgctgttaactgtgcgcaaagaagggcccaatcaa
ggcagacagttttacaaatgcagcgctagtacctgcaactttttcctctggtctgatcaa
cagtcagaggacagaagcagtgcagccctgcggggctctgcaccaccccaggcctttggg
gcaaggggtcctgcaaattctcagagaccagtaggaaagagaggcccagaacattttgga
agcagcaacaactccaattcaggaggcagcacagtctgcaggtgtgaccagccagccatc
acacgcacagtccaaaaagatggccctaacaaagggcggcagttccacacgtgctcaaaa
cccagagagcagcagtgcggcttcttccagtgggctgatgaaaacgtggctccaggagct
tctggagatttctcttttaaccactttgggagcagtggatactcaagggagttgggaagt
aaagctaagagaccaagcaatctctcccaaggagcaacagccaagaaaccacggacctgt
agcatttgccaccagcctggccacactaagaaaacttgtcctctagatcactga
DBGET
integrated database retrieval system
