KEGG   Phasianus colchicus (Ring-necked pheasant): 116237999
Entry
116237999         CDS       T07365                                 
Symbol
LARP1B
Name
(RefSeq) la-related protein 1B isoform X1
  KO
K18757  la-related protein 1
Organism
pcoc  Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:pcoc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcoc03019]
    116237999 (LARP1B)
Messenger RNA biogenesis [BR:pcoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116237999 (LARP1B)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 116237999
NCBI-ProteinID: XP_031463310
Ensembl: ENSPCLG00000015327
LinkDB
Position
Unknown
AA seq 1028 aa
MSAAQVSAAPAERPAWGAEGRDGPAEGARRREPGSPGGKEAAESGGRREPEPDERRRRPA
AAEAPPPKENPWTKRRAARDGAADGQPALREPELENSTKHVKAAKARTRKCSKAGDFVDI
GDWPTPSETANNECKSLSHGKKPTNRKEKEEKFDPKGNNGTKDNLEANPNGPGDNISEDE
GQTNNQRKKGNKQKWVPLHLDDVRSDSQERSSSRSNSRSQLETNKLILHNNRRNETRNWH
RDREKRDDHDEVCSVRSEGGSVREFSRGRGRGRGKGRGRSRGNPRRNFDYSVGYQELYGE
ITDQAFQPELNSSMMYYYDDGTGVQMYSVDEVLLKEYIKRQIEYYFSTENLERDFFMRRK
MDRQGFLPISLIASFHRVQALTTNATLILEALKDSTEVETVDQRIRKRVDPEKWPIPGPP
SCNLSTTDFSQLINCPEFIPGQAYGSHTESAPSSPGMGSLLSLKENTETSTFQTISKGLS
TSLPDLDSEPWIEVKNRHHASTVRVKECVPIPDQVSGQQQPPPPSEEQEQEELDFLFDEE
MEQIQGHKNKFTDWSDSSSDYEIDDQDVNKILIVTQTPPYMRKHPGEGRAGNHLCHGKIT
SELAKVINDGLYYYEQDLWTVQSENDTTVMQEVENFRKLNLVGKEEFDNLAPELIADQSQ
EIPLGSSELQKAEEPVCNFFSTEALPAATVTRSLPTVVPESPRVHPGFTPRTPRTPRLQD
PNKTPRFYPVVKEAQSIDVKAPRKRKTRHSTNPPLECHVGWVMDSRDHRPRTSSVSSSSA
SPSEGAALAGGYGCTPNSLPKFQHPSHELLKENGFTQQVYHKYHRRCLTERKRLGIGQSQ
EMNTLFRFWSFFLRDHFNRKMYEEFRQLALDDAKEHYRYGLECLFRFYSYGLEKKFRRDI
FKDFQEETKRDYEAGQLYGLEKFWAYLKYSQHKTPAIDPKLQEYLSKFRRLEDFRVDPPF
SEECGRRQFAAAGEDSGHRRHPARSCRTFPVAQPAVLEHVTSENTVQAPRAGHPNAATKS
IGSDVPEK
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgtccgccgcgcaggtgtccgccgcgcccgccgagcgcccggcctggggcgccgagggc
cgagacgggccggcggaaggggcccggcggagagagcccggttcgcccggcgggaaggag
gccgcggagagcggcggccggcgggagcccgagcccgacgagcggcggcggcggccggcg
gcggccgaagcccctccgcccaaggagaacccgtggacgaagcgcagagccgcgcgggac
ggcgcggccgacgggcagcccgcgctgcgggaaccagaactagagaattccactaaacat
gtaaaagcagcaaaagccaggacaaggaaatgcagcaaggctggtgattttgttgatatc
ggagactggccaacaccaagtgaaacagcaaacaatgaatgcaagtctctaagtcatggt
aagaagccaacaaatagaaaagaaaaggaggagaaatttgatccaaaaggcaataatgga
accaaggacaacctggaggctaacccaaatggtccgggagataacattagtgaagatgaa
ggtcaaactaacaaccaaaggaaaaaaggtaacaagcaaaaatgggttccacttcacttg
gatgatgtaaggtcagatagtcaagaaagatcaagctctcgaagtaactcaagatctcag
ctggaaacaaacaagttaatacttcataacaacagacggaatgagacaagaaattggcat
cgtgatagagaaaagagagatgatcatgatgaagtgtgcagtgtaagaagtgagggtggc
agtgttcgagaattctccagaggcagaggaagaggaagaggcaaaggaagaggacgaagc
agaggaaaccctagaaggaactttgactattcagttggttatcaagaactgtatggtgaa
ataactgaccaagcatttcaacctgagcttaactctagtatgatgtattactacgatgat
ggaacaggagtgcagatgtattctgtggatgaagttcttctgaaagaatatataaaacgt
caaattgagtattatttcagcacagaaaacttggaaagagacttctttatgaggagaaag
atggaccgacaaggatttctgcctatttcattgattgctagcttccacagggtgcaagct
ctgactacaaatgctacactcattttggaggccctaaaggacagtacagaagttgaaact
gtggatcagaggataagaaaaagggttgatccagaaaagtggccaattccaggtccacct
tcctgtaatctgtcaacgactgacttttctcagctcatcaattgtccagaattcatacca
ggccaagcctatggctcacatactgagtctgcaccaagttctccaggaatgggaagcttg
ttgagtctgaaggaaaacactgaaacaagtacttttcagacaatatctaaaggattgtct
acaagtttgcctgatttggactctgaaccttggatagaagtgaagaacaggcatcatgca
tccactgtcagagtaaaggaatgcgttcctatacctgatcaagtatcaggccaacaacag
ccacccccaccttcagaggaacaagaacaagaagaacttgactttttgtttgatgaagag
atggaacaaattcagggtcataagaataaattcactgattggtcagatagcagttcagat
tatgaaattgatgatcaggacgtaaacaagattttgatagtaacacagacaccaccatat
atgagaaaacatcccggtgaaggtcgtgctggcaaccatttgtgtcatggaaaaataaca
tcagaacttgctaaagttattaatgatggcttatactactatgaacaggatttgtggaca
gtgcagagtgaaaatgacactacagtaatgcaagaggttgagaacttcaggaagctaaat
ctcgttggtaaggaagaatttgataatcttgcaccagaactgattgctgatcagtcccaa
gaaattcctctgggttcttcagagttacagaaagcagaggaaccagtttgtaatttcttc
agtactgaagcactaccagcagcaacagtgactcggtcactgccaactgtagttccagaa
tctccccgagttcaccctggtttcaccccacgaacacctcgcaccccgaggctacaggat
cccaacaaaacacccaggttctaccccgttgttaaagaagcacaatccattgatgtgaag
gctccaagaaaaagaaaaacacggcacagtacaaatcctcccttagaatgccatgtcggt
tgggtgatggattccagagaccataggccaagaacttcctctgtgagcagttccagtgct
tcaccttcagaaggagctgcgcttgcaggaggttatggttgtactccaaattctcttcca
aaatttcagcatccttctcatgaactgttaaaggaaaatggctttacacaacaggtgtac
cataagtatcatcgaaggtgtctaacagagaggaaacggttgggaattggccagtcccag
gaaatgaacacactttttcgtttctggtcctttttcctgagagatcacttcaacaggaaa
atgtatgaagaattcagacaacttgctctggacgatgcaaaagaacactacaggtacggg
ttggaatgcttgtttcgattttacagctatggcctagaaaagaaattcaggcgagacata
ttcaaggacttccaagaagaaacaaagagggactatgaagctggtcagctttatggactg
gaaaagttttgggcttacctaaaatattctcagcacaagacaccagccattgaccccaag
ctgcaagaatacctcagtaaatttaggagactggaggactttagagtggatcctcctttt
agtgaagaatgtggcaggaggcagtttgctgcagcaggtgaggattcgggtcatcgcaga
catccggctcgttcctgtagaacatttcctgtggctcagcctgcagtgctggagcacgtt
accagtgagaacactgtgcaagcacccagagcaggccatcctaatgctgccacaaaatca
ataggaagtgatgtaccggaaaaatag

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