Phasianus colchicus (Ring-necked pheasant): 116238068
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Entry
116238068 CDS
T07365
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pcoc00536
]
116238068 (COL25A1)
Glycosaminoglycan binding proteins [BR:
pcoc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116238068 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
116238068
NCBI-ProteinID:
XP_031463413
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MLGKSRGAAGRDGCGGERCPRRAGPCCSALPVLLSALAAASCVYLGVRTSDLQARLAAIE
GARGGFAAAPLPPLPGFSLERLNEMMQEKVERLLAQKSYEHLAKIRAAREAPAECSCPPG
PPGKRGKRGRRGETGPPGQPGPQGPPGPKGEKGDQGDQGPRGLPGFPTVAALHSNQILTV
KGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGIPGEPGKPGEQGLAGPQGPPGQKGS
VGVPGVPGKDGQMGEPGLPGVAGEKGAAGLKGDPGERGEKGDAGENGPKGDTGEKGDPGS
SAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGDRGEA
GPPGKGERGETGLPGPKGDTGDRGDTGSPGPRGPPGQKGDQGATEIIDYNGNIHEALQGP
PGPPGPQGLQGPKGEPGSPGIPGVDGEQGPKGLKGDMGEPGMHGEKGGIGLPGLPGANGM
KGEKGDAGLPGAQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGEPGLNGLKGLKGEQGQK
GDRGPLGLPGASGLDGKPGPRGIDGPVGPHGPAGPKGDRGEKGTVGDPGPRGPYGLPGFP
GPRGEKGEIGEKGEKVIAVLLTLAWFLGPVSSAVFIP
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcaagagccgcggagccgcaggacgggatggctgcggcggggagcgttgcccg
cgccgggccgggccgtgctgctcggcgctgcccgttctgctctccgcgctggcggccgcc
tcctgcgtgtacctgggggtacggaccagcgacctccaggcccggctggcggccatcgag
ggcgcccgggggggcttcgccgccgctccgctcccgccgctgcccggcttttctctggaa
cggctcaacgagatgatgcaggagaaagtggagcggctgctcgcccagaagtcctacgag
cacttggcaaaaatccgagcggcgagagaagcgcccgcagagtgcagctgcccgccaggt
cctccagggaaaagaggtaagcggggcagaagaggagagactggacctcctggtcagcct
ggtcctcaaggccctcctggtccaaaaggcgagaagggagatcaaggtgatcagggccct
cggggtctgccaggcttccccacagtcgctgctctgcacagtaatcagatcctcaccgtc
aagggggaccaaggacaagccggaccccctggacctccagggccaccaggacccagaggt
cccccaggagatactggcaaagatggtcctcgagggatgcctggcattccgggtgagcca
ggaaagccaggtgaacaagggttggcaggacctcaagggcctccaggacaaaagggttct
gttggagtgcctggtgttcctgggaaagatggacaaatgggagaacctggtttgcctggc
gtagcgggggagaagggagcagcggggcttaagggtgaccctggagagagaggagaaaag
ggtgatgctggagaaaatggaccaaagggtgacacaggagaaaagggtgaccctggttcg
tctgctgcaggaattaagggtgaacctggtgaatctggacggcccggacaaaagggtgaa
ccaggtcttcctgggcttcctggactccctgggataaagggtgaaccaggtttcattggt
ccgcagggagaacccgggctgccagggttaccaggaacaaagggtgacagaggagaggca
ggccctcctgggaagggtgagcgaggtgaaactggacttccaggaccaaagggtgataca
ggtgacagaggtgacacaggatctccaggtccacgggggccacctggacagaagggtgat
caaggtgctacagagataattgactataatggcaatattcatgaagctctacagggacca
ccaggaccaccgggaccccaagggctgcaaggtccaaagggtgaaccaggatccccagga
attcctggagttgatggggaacagggtcctaaaggactaaaaggagatatgggtgaacct
ggaatgcatggagaaaagggaggaattggactacctggattgccaggagccaatggcatg
aaaggtgaaaaaggagatgctggtttgcctggtgcccaaggcccttcgatcataggacct
cctggacctccagggccacatggtcctccgggccctatgggacctcatggcctgcctggc
ccaaagggtgaaccagggttaaatggtcttaaaggattgaagggtgaacaaggtcaaaag
ggtgacagagggccccttggtcttccaggagcatctggcttagacggaaagccaggaccc
cggggtatagatggcccagtcggtccccacggccctgcaggccctaaaggagacagaggt
gaaaagggaactgtaggtgaccctggacccagaggaccctatggcttgcctggtttccct
ggtcctcgaggagaaaagggtgaaataggagaaaagggagaaaaggtgatcgcagtgtta
ttaactcttgcttggttccttggcccagtcagctctgctgtctttattccataa
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