Phasianus colchicus (Ring-necked pheasant): 116238407
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Entry
116238407 CDS
T07365
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116238407 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcoc04121
]
116238407 (LMO7)
Ubiquitin system [BR:
pcoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116238407 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
PDZ_2
PDZ_6
LIM
DUF6288
Motif
Other DBs
NCBI-GeneID:
116238407
NCBI-ProteinID:
XP_031463959
Ensembl:
ENSPCLG00000000160
LinkDB
All DBs
Position
Unknown
AA seq
1346 aa
AA seq
DB search
MTAAVPRARPGGGPSARHSLFFPAMDGREDAECGCEAAFAEAQRWVETVTGKSFGTKDFR
AALENGVLLCDLINKIKPGIVRKINRLSTPIAGLDNINVFLKACENIGLKEAQLFHPGDL
QDLSNRVTVKPEETNRRVKNVLITLYWLGRKAQSNPHYNGPYLNLKAFEKLLGQALTKAL
EESSHLNRSGRDSGYGDIWYVDRGEPFPSSASHKRDDSFDSLDSLGSRSSTSFSSDITLK
GGSEGCDSDTDSELPFKMRDSHKDDRSYRRISVIEPKPATDFNRFLPTKNKQPAYMPAPL
RKKRTEKNEDNRRSWASPVYTESDGTFSRLFQKLSDEQGSKSLNDVSAEEQQTLRKIRYE
ELQKIKEQLQEQDLKWQEDLAKWKNRRKSFTSELQKKKEEREEIERRASEVSDRSSKPLK
EMQQEREQKYDGRWVYSLTDDVFTEEKAPTTRSTVKDYLFEEETSYSTKDSKSQYAAQRS
KENLPKPESSATREAPAVSKSLAEEQSSALLSTRYSVNAQTGSAQVSASLPRSYQKTDTS
RLTSVVTPRPFGVHSRGISSLPRSLTMDDAQKYNGEVEKAKGTQILTSNMFSLPDSTYSL
STSVLRRRGEEEEEEKEGVKSAPTPSLTLPVKSQDRDAGDSILKPEYCSPPDSVSLASSA
ENASLTEHDDSKSQEQYSELRISMNQRPGYSHNFGFTTNWTSSGALVQTVEEDSPAALCQ
LQVDDEIIAINGTKVSQMDSSQWEEAITRALETGNLVMDVRRYGKNGTSDNKWIDATSGE
RVSSVSTISTKREFSSSLQSSGTGTKLINGMQGDLGSNEQRASEPISLKNLKRRSQFFEQ
GGPEPAMPDLPVPSISAPSRRVWDQEEERKRQEKWQKEQDRLLQEKYKREQEKLREEWLR
AKQEAEKENSKYLDEEQTVITSNMITVSARAPSASSWRASPEVSTPEEPEGDGGSELAAH
LLAKEEERRLQEEEEAALRVEREREHQELELERQRKEREQQYAEEQRRQAEMEEQRRQAE
MEEQRRQAERQREMSVETSQYQRRYERYEVSKTTENQPGQHLIDRRYERYESSKTIEEQP
GQSFSDRNKSKSTSELNEFNANRNSTHSRHSERSWNTSESQKGSQKEHNLSAAELERQQI
LQEMRKKTSLHTDSSWIRQRSSSVHKEPISLYSSSMRRGESLDNLDSSRTSSWRHHSRLN
QSSSTSSLSSNQDHSRPVSTSNRAYMCTPSSAKAPPLTTSVRAPPASQAAPRVQSPVSAS
QPGSQMRSRSVSGKKICSYCNNVLGKGAAMIIESLGLCYHLHCFKCVACECDLGGSRSGA
EVRIRNNKLFCNDCYLRFKTGQPTSM
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggctgttccgcgcgcccgtcccggcggaggaccgagcgcccgccactcgctc
tttttcccggccatggacggcagagaggatgccgagtgcggctgcgaggcggcgttcgca
gaggcgcagagatgggtggagacagttactgggaaaagctttggaaccaaagactttcga
gcagctttagaaaatggagtcctgttgtgcgatttgattaacaagatcaaacctggcatt
gttaggaagataaatcgtctgtcaactccaatagctggcttggataatataaatgttttt
ctgaaagcttgtgaaaatattggattgaaagaagctcaactttttcatccaggagatctc
caggatttgtccaatcgagttacagtcaaaccagaggagaccaacagaagagtgaaaaac
gttttgattacattatattggctggggagaaaagcacaaagtaaccctcactataatggt
ccatatctcaatcttaaagcatttgagaagttattagggcaagcattgactaaggcactt
gaagagtccagccacctaaacagaagtggcagggatagtgggtacggtgatatttggtac
gtggaccgaggagaaccttttccatcttcagcaagccacaaaagagacgattcttttgat
agcttggactctcttggctcaagatcctccacaagcttttcatcagacataaccttgaaa
ggtggcagtgaaggttgtgatagtgacacagactcagaactgcctttcaagatgcgtgac
tcccataaagatgacaggtcctatcgaaggatttctgtaattgaaccaaaacctgctact
gacttcaatcgcttcttacccactaaaaacaagcagccagcatatatgccagcaccccta
aggaagaaaagaacagagaagaatgaggacaacaggaggagctgggcaagccctgtctac
acagagtcagatggcacattttcaagactgtttcaaaagctttctgatgagcaagggagt
aaatctttgaatgatgtcagtgcagaggaacagcagacattgcgcaaaattcgttatgaa
gaactacaaaagataaaagaacagctgcaagagcaagatctaaagtggcaagaagatcta
gcaaagtggaagaatcgcagaaagagcttcacttcagagttgcaaaagaaaaaggaagaa
agagaagaaatagaaaggagagcctctgaagtttctgataggagtagcaagccactgaaa
gaaatgcagcaggaaagggaacaaaaatatgatggcagatgggtgtattcactgactgat
gatgtgtttactgaagaaaaagcacctaccacacgatcaacagtgaaagattacctgttt
gaggaagaaacctcctacagcactaaggacagcaaaagccagtatgctgctcagagaagc
aaggagaatctaccaaagccagagagctctgccacacgtgaggctcctgctgtctcaaag
agcctggcggaagagcagagctcagctcttttgtctacgcgctactcggtgaatgctcaa
actgggtcagctcaggtttcagcttctctccctagaagttaccagaaaactgatacctcc
aggttaacatctgtggttacaccaagaccttttggtgtccactccagaggaatctcctca
cttccacggtcgctcacgatggatgatgctcagaaatacaatggagaagtggaaaaagct
aaaggaactcaaattttaaccagcaacatgttttcactaccagactctacatactctctc
tccaccagtgtactcagaaggagaggtgaggaggaagaagaggaaaaagaaggtgttaag
tcagcacctactcctagtttgacattacctgtaaaatcacaagaccgagatgctggagat
agtattcttaaaccagagtattgttctcctcctgattctgtttcacttgcatcttctgca
gaaaatgcgagtctgacagaacatgacgattcaaaatcccaggaacagtacagtgaattg
agaatcagtatgaaccagagacctggctacagtcacaactttgggtttacaacaaattgg
acttcttcaggggccttagtacagacagttgaagaagatagccctgcagcactttgtcag
ctgcaggtagatgatgagatcattgctatcaacggcacaaaggtttcacaaatggacagt
agtcagtgggaagaagccatcaccagagcattagaaactggaaacctggtcatggatgtt
agacgatatggaaagaatggtacatctgataataagtggattgatgcaacttctggagaa
cgcgtttcaagtgtctcaaccatatcaacaaaaagagaattctccagcagccttcaaagt
tctggaacaggaacaaaattgataaatggcatgcaaggagatcttggatctaatgaacaa
agagcatctgaacctatttctttgaaaaacttaaaaaggcggtcacaattttttgaacaa
ggaggcccggagcctgcaatgcctgatctcccagtcccatccattagtgctccgagtcgg
cgggtttgggatcaagaagaagaacgaaaacgacaggagaaatggcaaaaggagcaggat
cgtttattgcaggagaaatacaaacgggaacaagaaaaactgagggaagaatggctacga
gctaagcaagaagcagaaaaagaaaactccaaatatttagatgaggaacaaactgttata
acctcaaacatgatcacagtctctgcgcgagctccatctgcctccagctggagggcaagc
cctgaagtgagtactcctgaggagccagaaggagatggaggaagtgagctggcagcacac
ttgctggccaaggaagaagaaaggaggcttcaggaggaagaagaagcagccctgcgtgtt
gagcgagaaagggaacaccaagaactagagcttgagagacagcgtaaagagagggaacag
cagtatgccgaggagcagaggcggcaggcagagatggaggagcagaggcggcaggcagag
atggaggagcagaggcggcaagcagaaaggcagagggaaatgtcagtggagacatctcag
taccaaagacgttatgagcgctatgaagtatctaaaacaacagagaaccaacctggccaa
catctcattgacaggcgctatgaacgctatgaatcttccaaaaccatcgaggagcaacct
ggtcagtcattttctgacaggaataaatccaagtcaacttcagagctgaatgaattcaat
gcaaacagaaatagtactcatagcaggcattcagagaggtcttggaacacgagtgagtca
cagaaggggtctcagaaggagcacaacctgtctgcagcagagttagagagacaacaaatc
cttcaggaaatgaggaagaaaacatctctacacacagacagcagctggattaggcaacgc
agttccagtgtgcataaggagccaatcagtctgtacagcagtagtatgaggagaggggag
tctttggacaatctcgattcttcaagaacaagctcgtggaggcaccactcgaggttgaac
cagtcctcctccacttcatctctgtcctctaatcaggatcacagccgcccggtgtccact
tcaaaccgggcctacatgtgcactccttcctctgccaaagcacctccattgaccacctct
gtgagagccccacctgcatcacaggcagccccccgggtgcagtctcctgtttctgcttcc
cagccagggtcgcagatgcgtagcaggtcagtcagtgggaagaaaatctgttcatactgt
aataacgttctgggcaaaggagcagccatgatcattgagtctcttggtctttgttatcat
ttacattgttttaagtgcgttgcctgtgaatgtgaccttgggggatcccgctctggagct
gaagtcaggatccgaaacaacaaactcttctgcaacgactgctatctcagatttaaaact
ggacaaccaacctccatgtga
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integrated database retrieval system
