Phasianus colchicus (Ring-necked pheasant): 116238484
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Entry
116238484 CDS
T07365
Symbol
PTCH1
Name
(RefSeq) protein patched homolog 1 isoform X1
KO
K06225
patched 1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116238484 (PTCH1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
116238484
NCBI-ProteinID:
XP_031464061
Ensembl:
ENSPCLG00000015080
UniProt:
A0A669QE63
LinkDB
All DBs
Position
Unknown
AA seq
1444 aa
AA seq
DB search
MASAADASEPESGSSTAGGGGHPVRAARSAGGRRRRRSGGTRRAAAPDREYLQRPSYCDA
AFALEQIAKGRATGRRAPLWLRAKFQRLLFNLGCYIQKNCGKFLVVGLLIFGAFAVGLRA
ANLETNVEELWVEVGGRVSQELNYTRQKIGEEAMFNPQLMIQTPQEDGTNVLTTEALRQH
LDSALQASRVHVYMYNRQWKLEHLCYKSGELITEAGYMDQIIEYLYPCLIITPLDCFWEG
AKLQSGTAYLLGKPPLQWINFDPLEFLEELKKINYQVESWEEMLNKAEVGHGYMDRPCLN
PADPDCPITAPNKNSTKPLDVALVLSGGCYGLSRKYMHWQEELIIGGTVKNSSGKLVSAQ
ALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRMYVEVVHQSVAQNSTQK
VLSFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCAKSQGAVGLAGVLLVA
LSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTG
ECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSM
DLYRREDRRLDIFCCFTSPCVTRVIQIEPQAYTENDNICYSPPPPYSSHSFAHETQITMQ
STVQLRTEYDPHTQVYYTTAEPRSEISVQPVTVAQDSLSCQSPESTSSTRDLLSQFSDSS
VHCLEPPCTKWTLSTFAEKHYAPFLLKPKAKVVVIFLFLGLLGLSLYGTTRVRDGLDLTD
IVPRETREYDFIAAQFKYFSFYNMYIVTQKADYPNVQHLLYELHRSFSNVTYVLLEEDRQ
LPKMWLHYFRDWLQGLQDAFDSDWETGKITYNNYKNGSDDAVLAYKLLVQTGNRAKPIDI
SQLTKQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPET
RLRIPAAEPIEYAQFPFYLNGLRETSDFVEAIEKVRAICNNYTSLGIASYPNGYPFLFWE
QYIGLRHWLLLSISVVLACTFLVCALFLLNPWTAGIIVVVLALMTVELFGMMGLIGIKLS
AVPVVILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLM
LAGSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGRNRLPTPSPE
PPPSIVRFALPPGHTNNGSDSSDSEYSSQTTVSGISEELHHYEATQSSAVPVHQVVVEAT
ENPVFARSTVVQPESRHQSSPKLQSNPEASTQQVWRQGRQPKREVREGLRPPPYRPRRDA
FEISTEGHSGPSNKDRLSHKTRSHNMRSPAFGAMGVSGSAYCQPITTVTASASVTVAVHP
AVHSHSSRRGSFPSCEGHHEDNHGMFEDPHVPFNVRCERRNSKVEVIELQDVECEERTAS
KSSE
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggccgctgacgcctcggagccggagagcggcagcagcaccgcgggcggcggc
ggccaccccgttcgggcggcgaggagtgccggcggccggcggcggcggcggagcggaggg
acccggcgcgccgcggcgcccgaccgggagtatctgcagcggccgagctactgcgacgcg
gcgttcgccctggagcagatcgcaaaggggagagctaccgggaggagagcgccgctgtgg
ctgcgggcgaagtttcagagactgctctttaacctgggctgctacattcagaagaactgc
ggcaagttcctggtggtcggcctgctgatattcggcgcgttcgcggtgggactacgggcg
gccaacctggagaccaacgtggaggagctgtgggtggaagttggtggacgagtgagtcag
gagttaaactacacacggcagaagattggagaagaggccatgtttaacccccagctcatg
attcagactccgcaggaagacggaactaatgtactaacaacagaagcactccgacagcac
cttgactctgcacttcaggccagcagagtacatgtttatatgtacaacagacaatggaag
ttggaacatttatgttataaatcaggagaactcatcacagaagcaggttacatggaccag
attatagaatatctttatccttgcttaattatcactcctttggactgcttctgggaggga
gcaaagctacagtcgggaactgcctatctattagggaagcctcctttgcagtggatcaac
tttgaccccttagaattcttggaagagttaaagaaaataaactaccaagtggaaagctgg
gaagaaatgctgaataaagcagaggttggtcatggctatatggatcgaccttgcctgaat
cctgctgatcctgattgcccaatcacagctcccaataagaattctaccaaacctcttgat
gtagcccttgttttgagtggtggatgctacggactgtcaagaaaatacatgcattggcag
gaagagttaattataggtggtacagtcaagaacagttctggtaaacttgtcagtgctcag
gctttgcaaaccatgtttcagttaatgactcctaagcaaatgtatgagcacttcaaggga
tatgaatatgtttcacatatcaactggaatgaggataaagcagcagcaattctagaagcc
tggcagaggatgtatgtcgaggttgttcatcaaagtgttgcacaaaattctactcagaag
gtgctttcctttacaacaactaccctggatgacatcctaaagtcattttctgatgtcagt
gttatcagagtagctagtggctacttactaatgcttgcctacgcctgtttaacaatgctg
aggtgggactgtgccaagtctcagggtgccgtgggactggcaggagtcttgctggttgca
ctgtcagtggctgcaggcttgggtctgtgctcactgattggaatttcctttaatgctgcc
acaactcaggttctgccttttcttgctctcggagttggtgtagatgatgttttccttcta
gctcatgcatttagtgaaacaggacagaataagagaattccattcgaggacagaacaggt
gaatgtttgaagcgaacaggagcaagtgtagcccttacatctatcagcaatgttactgca
ttctttatggctgccttaatccctattcccgctttacgagcattttcactacaagcagca
gttgtggtggtattcaacttcgcgatggttctgctaatttttcctgctatactgagcatg
gacctttatcgtcgagaagacaggagactggatatattctgctgttttacaagtccgtgt
gtcactagagtgattcagatcgagcctcaagcatatacagaaaatgacaatatttgttac
agtcctccacccccgtacagcagtcacagctttgcacatgaaactcagattacaatgcag
tctacagtgcagttgcgcactgagtatgatcctcatacacaagtgtactacaccactgca
gagccacgatcagaaatatcagtacagcctgtgacagtggctcaagatagtcttagctgc
cagagcccagaaagcacaagctcaacaagggatttgctttcccagttctcggactccagt
gtgcattgccttgagccaccctgtacaaagtggacactctcaacttttgcagaaaaacat
tatgctccattcctcctaaaaccaaaagctaaggttgtggttatttttcttttcctgggc
ttacttgggcttagcctctatggaactacccgggtgagagatgggctagatctcacagac
attgtacctcgggagacacgggaatatgacttcattgctgcacagttcaagtacttttcg
ttctacaatatgtacattgtgacacagaaagcagactatccaaatgtccagcacttactt
tacgaacttcacagaagtttcagcaatgtgacgtatgttttgttggaagaggataggcag
cttcccaaaatgtggttacattactttcgagactggctgcaaggacttcaggatgcattt
gacagtgactgggaaactgggaaaatcacttacaacaactataaaaatggatctgatgat
gctgttctggcttacaaactcttggtacaaacaggcaaccgagcaaagcccattgacatc
agtcagttgactaaacagcgtctggtggatgcagatggaatcattaacccaagtgctttc
tacatctacctgacagcctgggttagcaatgaccctgtggcctatgctgcctcgcaagcc
aacatccggcctcaccgcccagaatgggtgcatgacaaagcagactatatgccagaaaca
aggctaagaattccagcagctgagcccatagaatatgctcagtttcctttctacctcaat
ggattgcgtgagacttctgactttgtggaagctattgagaaagtgagagctatctgtaat
aactacaccagcctcgggatcgctagctacccaaatggttacccgtttctattctgggag
cagtacattgggcttcgtcactggctcctcttatccattagcgtggttttggcttgcacg
tttctggtgtgtgccctcttcctcctaaacccctggacggctgggatcattgtggtggtg
ctggctctgatgactgtggagctgtttggcatgatgggtctaattgggataaagctaagt
gcagtgcctgtggttatcctgattgcttctgttggaattggtgtggaattcactgttcat
gttgctttggcatttttaactgccataggagataagaaccgtagggctgtccttgcattg
gaacatatgtttgcaccagtgttggatggagctgtgtccactcttcttggagtattaatg
cttgcaggatcagaatttgattttattgtcaggtatttctttgctgttttggcaatctta
accattctgggagttctcaatggattggtgctgcttcctgttcttctttcattctttgga
ccataccctgaggtttctccagccaatggtcgaaacagattgcccacaccatctcctgag
ccacctcccagtattgtgaggtttgcactgccacctgggcacacaaataatggatcagat
tcctctgattcagagtacagctctcaaaccacagtgtcaggcatcagtgaagagcttcat
cactatgaggccacccaaagctctgcggtaccagtccatcaagtagtagtggaagccact
gagaatcctgtctttgcaagatccactgtggtacagccggagtcaaggcatcagtcaagt
cccaaattgcaatcaaatccagaggccagcacacagcaggtgtggcgtcagggcagacaa
cccaagcgggaagtgagggaaggactgcgaccacctccttaccgccctcgcagggatgct
tttgaaatttctactgaagggcattcaggacctagcaataaggatcgcttgagccacaag
actcgttcccataacatgagaagcccagcatttggtgccatgggtgtttcaggatcagcc
tactgccaacctatcactactgtgactgcctcagcttcagtgactgttgctgtccaccct
gctgtgcacagtcacagctctcgccgggggagctttccatcctgtgaaggacaccatgaa
gacaaccatgggatgtttgaggacccccatgtgccttttaatgtgcggtgtgaaagaaga
aattctaaagtagaagttatagagcttcaggatgtcgaatgtgaggagaggacagctagc
aaaagctcagaataa
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integrated database retrieval system
