KEGG   Phasianus colchicus (Ring-necked pheasant): 116238693
Entry
116238693         CDS       T07365                                 
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
pcoc  Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcoc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    116238693 (EXOSC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcoc03019]
    116238693 (EXOSC5)
Messenger RNA biogenesis [BR:pcoc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     116238693 (EXOSC5)
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 116238693
NCBI-ProteinID: XP_031464369
LinkDB
Position
Unknown
AA seq 191 aa
MEAAEEAAGCCSLRPFSCEQGLLSRPDGSATFVQGDTSVLAGLYGPAEVKGSRESPDGAT
VEVLLRPKVGLPGVAERSREQLLRRTFEAVLLGSLHPRTSITVVLQVLSDAGSLLACCLN
AACMGLLDAGLPLSSLFCGVTCALDPHGDIILDPTARQEQVRLLTPTNAPPWASQTFLSP
PFPKKNLLTST
NT seq 575 nt   +upstreamnt  +downstreamnt
atggaggcggcggaggaggcggcgggctgctgctccctgcggcccttctcctgcgagcag
gggctgctgtcccggcccgacggctccgccacgttcgtgcagggtgacacctcggtgctg
gccgggctgtacggccccgcggaggtgaagggcagcagagagagccccgacggcgccacg
gtggaagtgctgctgcgccccaaagtcgggctgcccggcgtggcagagcgcagtcgggag
cagctcctgcgacggacatttgaggctgtgctgctgggatccctgcacccccgtacctcc
atcactgtggtgctgcaggtgctgagcgacgccggctccctcctcgcctgctgtctgaat
gctgcctgcatggggctgttggacgcggggctgccgctctcctccctcttttgcggtgtc
acctgtgccctcgacccccatggggacatcatcctcgaccccactgcccggcaggagcag
gtgagactcctgacccccaccaacgcccccccctgggcctcgcagaccttcctgagcccc
ccattccccaagaaaaaccttctgacttccacaaa

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