KEGG   Phasianus colchicus (Ring-necked pheasant): 116238788
Entry
116238788         CDS       T07365                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pcoc  Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:pcoc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pcoc01009]
    116238788 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pcoc03036]
    116238788 (KDM5B)
Enzymes [BR:pcoc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     116238788 (KDM5B)
Protein phosphatases and associated proteins [BR:pcoc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116238788 (KDM5B)
Chromosome and associated proteins [BR:pcoc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    116238788 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN Exo70_N PHD_5
Other DBs
NCBI-GeneID: 116238788
NCBI-ProteinID: XP_031464533
Ensembl: ENSPCLG00000016612
LinkDB
Position
Unknown
AA seq 1525 aa
MAEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLH
FTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLFQLNRLVAEEGG
FDVVCKERKWTKIATRMGFAPGKAVGSHIRAHYERILYPYNLFQSGASLLCLQKPDLTSD
TKDKEYKPHDIPQRQSVQPSESCPPARRAKRLRAEATNIKTESDSPEARTHNLRRRMGCA
PPKCENAEKETYSTVKLTEKREHAGEQEKDKSKARSKKPTSAVDLYVCLLCGSGNDEDRL
LLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECNKPQEAFGFEQAARDYTLRTFGE
MADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGK
FKVRPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHW
SYSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFESQPDLLHQLVTIMNPNTLMAH
GVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRY
CVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIDDEKVLREKVQKLGVTDSERVAFEL
FPDDERQCYKCKTTCFMSAVYCPCKPGLLVCLYHVEDLCSCPTYQYKLGYRYTLEELYPM
MNALKMRAESYNEWASNVNEALEAKISNKRSLISFKALIEESELKKFPDNDLLRHLRLVT
QDADKCASVAQQLLNGKRQTRYRSGGGKCPNQLTVNELRLFVRQLYALPCLLSQTPLLKD
LLDRVEAFQQQSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLAELRVRLEQARWLEDVQ
MASSEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPR
QSLSSLVVAVKEIEEIPAYLPSGAALKDAVQKAQDWLQEVEALQVGGRVPVLDTLVELVT
RGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENSPYSLLEVLCPRCDIGTLSLKRK
QKKLKEPMPSGKKKSTKLESLSDLERALCESKDTASAMATLGEARLKEMEALRSLRAANE
GKVLLCGEEDAELKVCVCQKEPAAPMIQCELCRGFFHTGCVSVPHALQAPRVWLCPLCRR
SEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVG
SGLLYSRWQSAAGQLPETNKVSQTIGAMSFSMPHDWDNRTIYLHSPFSTGQQCIPLHVVS
TELDELMMEAQLLQVSLPEIQELYQILFTKQSPALQAEQKPSGGPSNEKSECCRGKKDGM
SYMERKMKRRFERESFCEEKRARVRKMRTPKKKKLKLSHTKDLSSSSSRMERERERLLEV
QRSSESHLVPSDTSFSEQEDSEDEDAICPAVTCLQPEGEEVDWVQCDGSCNQWFHQVCVG
ISPEMAEKEDYICASCAGRGSPYRK
NT seq 4578 nt   +upstreamnt  +downstreamnt
atggccgagttcctgcccccgcccgagtgcccggtgttcgagcccagctgggaggagttc
gccgaccccttcgccttcatccacaagatccggcccatcgccgagcagaccggcatctgc
aaggtgcggccgccgccggactggcagcctccatttgcatgtgatgttgataaacttcac
ttcacgccgaggatccagcggctcaatgagttggaggcccaaacccgtgtgaagctgaat
ttcctggaccagattgcaaaattctgggagctccagggctgtacgctgaaaattccacat
gtggagaggaagatcttggatttatttcagcttaacaggctagttgcagaagaaggaggg
tttgatgtcgtttgcaaagagaggaaatggaccaaaatagccacaaggatgggatttgct
cctggcaaggctgtgggttcgcacatccgcgcgcattacgagcgaattctctatccttac
aacttattccagtctggagcaagcctgctgtgcctgcagaagccggatctcaccagcgac
acgaaggacaaggagtacaaaccccacgacatcccgcagaggcagtcggtgcagccatcc
gaaagctgccctcctgctcgccgagcgaagcgcctgcgggccgaggcaaccaacattaaa
actgaatctgattctccagaggcgagaacgcacaatctgagacgcagaatgggatgtgcc
cctccaaagtgtgagaatgcagaaaaggaaacgtacagcacagtgaaacttactgagaag
agagagcatgctggggagcaggagaaggacaaatccaaagcccgatccaaaaagcccacc
agtgctgtggatttgtatgtgtgtctcttatgtggcagtggtaacgacgaggaccgtctc
ctgctgtgtgatggctgtgatgacagttaccataccttctgtttaattccaccccttcac
gatgttcccaagggggactggaggtgcccccagtgtttggctcaggagtgcaataagcct
caagaagcgtttggctttgagcaggcagcacgggactacacgctgcgcacctttggggag
atggcagatgccttcaagtccgactattttaacatgccagtccatatggtccccactgag
ctggttgagaaggaattctggagacttgtcagcaccattgaggaggacgtcactgtggaa
tacggagctgatatcgcttcaaaggagtttggcagtgggttcccagttagagatgggaaa
ttcaaagtgagaccagaggaggaggaataccttgatagtggctggaatttaaacaacatg
cctgtgatggagcagtctgttcttgcccacatcaccgcggatatatgtgggatgaaattg
ccctggctctatgtgggaatgtgcttttcttccttttgttggcacattgaggaccactgg
agctattccatcaactatctgcactggggagaaccaaagacgtggtacggagcccctggg
tacgcagcagaacagctggaggacgtgatgaagaagcttgctccagagctgtttgagtct
cagccggacctcttgcaccaacttgtcaccataatgaacccaaatactttgatggcccac
ggagtgcctgtttatcggaccaatcagtgtgctggagagtttgtgatcacctttccaaga
gcttatcacagcggcttcaatcagggctttaattttgctgaagctgtgaacttctgcacc
gtggattggctgccgttgggtcgccagtgcattgagcattaccgcctgctgagccgctac
tgcgtgttctctcacgatgagatgatttgtaagatggcctccaaggctgacgtcctggat
gtcgtggtggcatctactgttcagaaggacatggccatcatgatcgatgacgagaaggtg
ctgcgtgagaaggttcagaaactgggggtgacggactcagagagggtggcgttcgagctg
ttccccgatgatgagcggcagtgctataagtgcaaaaccacttgtttcatgtctgctgtt
tattgcccgtgtaaaccaggactgctggtgtgcttgtatcacgtggaggatctttgttcc
tgccctacctaccaatacaaactggggtaccgctacacgctggaggagctctatccaatg
atgaatgctctgaagatgcgtgcagagtcgtacaatgaatgggcttccaatgtgaacgaa
gccctggaagcaaagatcagcaataagagaagtctcatcagttttaaggctttgatagaa
gaatcagagctgaagaagttcccggacaacgacctgctgcggcacctccgcttggtcacc
caggacgcagataaatgtgcctcagtagcacagcagctccttaatggcaaaagacaaacc
aggtaccgctccggaggggggaaatgccccaaccagctgactgtgaacgagctgcggctg
ttcgtcaggcagctctatgccctgccctgcctgctgagccagacgccgctgctgaaggac
cttcttgatcgcgtggaagcttttcagcagcaaagccaaaagctgctctctgaagaaatg
ccgagtgctgcggagctccaggagctgttggatgtcagctttgacttcgacgtggattta
ccccaacttgctgagctgcgggtcaggctggagcaggcccgctggctggaggacgtgcag
atggcttcgtcagagcagaactctctcactctggacgatatgaggcgtctcatagactcc
ggcgttggcctggctccctacccagcagttgagaaggccatggcaaagctgcaggagctg
ctgactgtgtccgagcactgggatgacaaagccagaaacctgataaaggccaggccaagg
cagtcgctcagcagcctcgtggtggcagtgaaggagatagaggagatccctgcctacctc
cccagcggcgcggcgctgaaggacgcggttcagaaggcgcaggactggctgcaggaggtg
gaagctttgcaggttggaggacgtgtgcccgtcctggacacgctggtggagctggtgacg
aggggccgctcgatcccggtgcacctggactacctgccacggctcgagtccttggtggcg
gaggtgcaggcgtggaaggagtgtgcagccaacacgttcctgtgtgagaactccccgtat
tcccttctggaggtgctgtgtccccgctgcgatatcgggacgctgagcctgaaaagaaag
cagaagaagctgaaggagccgatgccgagcgggaagaagaagagcaccaaactggagagc
ctgagtgacttagagagagctctgtgtgagagcaaagacaccgcgtctgcgatggcgacg
ctcggggaggcgcggctgaaggagatggaggcgctgcgctccctgcgggcggccaacgag
ggcaaggtgctgctgtgcggcgaggaggacgcggagctgaaggtctgcgtgtgccagaag
gagccggccgctcccatgatccagtgtgagctctgcagggggttcttccacaccggctgc
gtttccgtgccccacgccttgcaggctccacgcgtgtggctctgcccgctgtgccgccgc
tcggaaaagccgcccttggagaagatccttcctctgctggcctccctgcagcgcatccgc
gtgcggctccccgagggggacgccctgcgctacatgatagagagaactgtgaactggcag
cacagagcacaacaaatgctgtattcagggaatctcaaacttctacaggacaaagttggc
tcaggattgctgtacagcaggtggcagagcgcggcggggcagctgccagagacaaacaag
gtgtctcaaacaatcggagctatgtcattctccatgcctcatgactgggataacagaacc
atatatttacattctccattttctacaggacagcaatgcatcccacttcatgtcgttagc
accgagctggacgagctgatgatggaagcgcagctgctgcaggtttctctgcctgaaata
caggagctgtaccagatcctattcacaaagcaaagccccgctctgcaggctgagcagaaa
ccgtcgggtgggccgagcaatgaaaagagcgagtgctgccggggcaaaaaggatggaatg
agttacatggagagaaaaatgaagcgccgtttcgagagagagagcttctgcgaggagaag
agagcaagggtaagaaaaatgagaacgcccaaaaagaagaaactgaaactgagtcacacg
aaggatctgagcagcagcagcagcaggatggagagggagagggagcggctcctggaggtg
cagcgcagcagtgaaagccatttggttccttccgacacgtcgttctctgagcaggaggac
tctgaggatgaagatgccatctgccctgcagtgacgtgtctgcagcccgagggagaggag
gtggactgggtccagtgcgatggcagctgcaaccagtggttccaccaggtgtgcgtgggc
atctcccccgaaatggccgagaaggaggattacatctgtgccagctgtgccgggaggggc
tccccgtaccgaaagtga

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