Phasianus colchicus (Ring-necked pheasant): 116238819
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Entry
116238819 CDS
T07365
Symbol
SMG5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116238819 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116238819 (SMG5)
03032 DNA replication proteins [BR:
pcoc03032
]
116238819 (SMG5)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
116238819 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
116238819 (SMG5)
DNA replication proteins [BR:
pcoc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
116238819 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
116238819
NCBI-ProteinID:
XP_031464563
Ensembl:
ENSPCLG00000018264
UniProt:
A0A669QMA6
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MSQGGGTGSESGEPEAKVLHTKRLYRAVVEAVHRLDLILGNKAAYQEVFKPENISLRNKL
RELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSALECAYRTHLVAGI
GFYQHLLLYIQSHYQLELQCCIDWTHVTDPLMGCKKPVSASEKEMEWAQMACHRCLVYLG
DLARYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCI
QSEVSFEGASGNLKRLYDKAAKMYQQLKKCESRKLSPSRKRCKDIKRLLVSFMYLQSLLQ
PKSSSLDSELTSLCQSVLEDFNLCLFYLPSPPNLSSVSEDEEEYESGYSFLPDLLIFRMV
IICFMSVHSLRRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFRSDGTD
ELEPREPLSSVEKEGEAELPNHHPRDEERKHDCKKSKKYSRLSCLRRRRHPQKADESDLS
EGFDSDSSQGSTKGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGKE
GSERGQSGAREGLKNGVDGSGSGDCKNTSSSKMESADPAINGPVSLSASDASIASNLQAM
STQLFQTKRCFRLAPTFSNILLKPSTEPPALKGSLDGKPCINGDVEKPGLAEQDNVSDSE
ESVLSTKSCRNERSLQEKLEIVSNEGLLLTVKVFLDWLRTNTDFIIMCAQSSQSLWNRLS
VLLNLLPSAADLQESGLELCKEVREVLSGAELPELRANLLLPEDVALRNLPPLRNAHRRL
NFEQDRPIFSAVEESVVRICCIRSFGHFVTRLQGSILQFNPELGIFISIAQSEQDSVVQQ
AQAQFHMAAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVLDAQALCQH
LAVVKQLASSGRFIIIIPRAVIDSLDFLKKENAGARDGIRYLEAEFKKGNRYIRCQRDVG
KSFERHKLKRQDLDAWNLYKILDSCKQLTVSQSSGDDDTTGMVTIITGFQLEDPSALSAP
MQSAIQAAAGASVEVKNILEFYKQWKEMG
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgagccagggcggagggacgggcagcgagagcggagagcctgaggccaaagtgctgcac
accaagcggctgtaccgagcggtggtggaggccgtgcatcgcctggatctcatccttggc
aataaagcagcgtaccaggaggtgttcaagcccgagaacatcagcctgaggaacaagctg
cgggagctgtgcgtgaagctgatgttcttgcatcccgtggattatggcagaaaagcagaa
gagctgctctggagaaaggtttactatgaagttatccaactcatcaagacgaataagaag
cacatccacagccgcagcgccctggagtgcgcctaccgcactcacctggtggccggcatt
gggttctaccagcacctgctgctctacatccagtcccactaccagctggagctgcagtgc
tgcatcgactggacgcacgtgacggacccgctgatgggctgcaagaaacccgtgtctgcg
tcggagaaggagatggagtgggcgcagatggcgtgccaccgatgcctggtttacctcggg
gatctggcacgctaccagaacgagctggcaggtgtggacacggagctgctggccgagcgc
ttctactaccaggcgctgtctgtcgcgccgcagatcggcatgcccttcaatcagctgggg
acgctggctgggagcaaatactacaacgtggaggccacgtactgctacttacgctgcatt
cagtctgaagtgtccttcgaaggcgcctccgggaacctgaagcggctgtacgacaaagcg
gccaaaatgtaccagcagctgaagaagtgtgagagcaggaagctgtcccccagcaggaag
cgctgcaaagacattaagaggctgctggtgagcttcatgtacctgcagagccttctgcag
cccaagagcagctctttggattctgagctgacgtctctgtgccagtccgtgctggaggat
ttcaacctgtgcttgttctacctgccttcccctcccaacctgagctcagtgagtgaggat
gaggaggagtacgagagcggctactccttccttcccgacctgctcatcttccgcatggtg
atcatctgcttcatgagcgtgcacagcctcaggcgtgcaggctccaagcagtacagtgca
gccattgctttcacgctggccctcttctctcacctcatcaaccacgtcaacattcgcctg
caggcagagctggaggagggggagaacccggtgccggcgttccgcagcgatggcacagat
gagctggagccgcgggagcccctcagctccgtggagaaggaaggtgaggcagagctgccc
aatcaccaccccagagacgaggaacggaagcacgactgcaagaaaagcaagaaatactca
cggctttcctgcctgcgccgccgccggcacccgcagaaggcggatgagagcgacctgagc
gagggcttcgactccgactccagccagggctccacgaagggcagcgacggctccgagagc
ggctcggagaagagcgacgaggaagcagaggctgcttttgatgtggagacagactctgac
atgaacagccaggagtcgcggtccgacttggaggacatggaggacgagccgggcaaggag
ggcagcgagcggggccagagcggggccagggagggcctaaaaaacggcgtggatggcagc
gggtcgggggactgcaagaacaccagcagctctaaaatggagagtgcggatccagccatc
aatgggcccgtgtccctgagtgccagcgacgccagcatcgccagcaacctgcaggccatg
tccacacagctcttccagaccaagcgctgcttccgcttggcccccaccttcagcaacatc
ctcctgaagcccagcaccgagccgcccgccttgaagggcagcttggatggcaagccctgc
atcaacggcgatgtggagaagcccggcttggcagagcaagacaacgtgtctgactccgag
gagagcgtgttgagcaccaagtcgtgcaggaacgagcggtccctgcaggagaagctggag
attgtgagcaacgaggggctgctgctcaccgtcaaggtgttcctggactggctgaggacg
aacacggacttcatcatcatgtgtgctcagagctcccagagcctatggaacaggctgtcc
gtgctcctcaacctgctgccttctgctgccgacctgcaggagtcagggctggagctgtgt
aaggaggtgagggaggtgctgagcggggcggagctgccggagctgcgtgccaacctgctg
ctccctgaggacgtggctctgcgaaatctgccccctctgaggaacgcacacaggaggctg
aacttcgagcaggaccgccccatcttctcagcagtggaggagtccgtcgttcggatctgc
tgcatccggagcttcgggcactttgtcacacggctgcagggcagcatcctgcagttcaac
ccggagctggggatcttcatcagcatagcgcagtcggagcaggacagcgtggtgcagcag
gcccaggcccagttccacatggccgcagaggaggctcgtcggaaccggctgatgagagac
atggctcagctccgcctgcagctggaggtgtctcagctggagggcagcctgcagcagccc
aaggcacagtcagccatgtctccgtacctcgtgctggacgcgcaggcgctctgccagcac
ctggccgtggtcaagcagctggccagcagcgggaggttcatcatcatcatcccacgggca
gtgatcgacagcttggatttcctcaagaaggagaacgccggcgcccgggacggcatccgc
tacctggaggcggaatttaaaaagggaaaccggtacattcgttgccagagagatgttggg
aagagctttgagaggcacaaattgaagagacaagacttggatgcgtggaacctctataag
atcctggacagctgcaagcagctgacggtgtcccagagcagcggggatgatgacaccaca
gggatggtcaccatcatcacaggcttccagctggaggaccccagcgcgctctcagcgccc
atgcagtctgccatccaagcagccgctggcgccagcgtggaagtgaagaacatcctggag
ttctacaagcagtggaaagagatgggctga
DBGET
integrated database retrieval system
