KEGG   Phasianus colchicus (Ring-necked pheasant): 116238842
Entry
116238842         CDS       T07365                                 
Symbol
POLR2I
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
pcoc  Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03020  RNA polymerase
pcoc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116238842 (POLR2I)
  09124 Replication and repair
   03420 Nucleotide excision repair
    116238842 (POLR2I)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcoc03021]
    116238842 (POLR2I)
   03400 DNA repair and recombination proteins [BR:pcoc03400]
    116238842 (POLR2I)
Transcription machinery [BR:pcoc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     116238842 (POLR2I)
DNA repair and recombination proteins [BR:pcoc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116238842 (POLR2I)
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Zn_ribbon_recom Ogr_Delta Zn_ribbon_GRF_2 DUF3716 SR1P TtuA_LIM_N Zn_ribbon_NrdR
Other DBs
NCBI-GeneID: 116238842
NCBI-ProteinID: XP_031464604
Ensembl: ENSPCLG00000013486
UniProt: A0A669Q7F4
LinkDB
Position
Unknown
AA seq 130 aa
MRGVAMESEGPSEPGFVGIRFCQECNNMLYPKEDKESRVLLYACRNCDYQQEADSSCIYV
NKITHEVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCT
APHCGHRWTE
NT seq 393 nt   +upstreamnt  +downstreamnt
atgcgtggggtcgccatggagtcggagggtccctctgagccgggtttcgtggggatccgc
ttctgccaggagtgcaacaacatgctgtaccccaaggaggacaaggagagccgtgtgctg
ctttacgcgtgccgcaactgcgactaccagcaggaggccgacagcagctgcatctacgtc
aacaagatcacgcatgaagtggatgaactcacgcagatcatcgctgatgtctcccaggac
cctacgctgccgcgcactgaggaccacccctgccagaagtgtggacacaaggaggctgtt
ttcttccagtcgcacagtgcaagagctgaggatgccatgaggctctactatgtctgcaca
gccccgcattgtggccaccgctggaccgagtga

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