Phasianus colchicus (Ring-necked pheasant): 116238957
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Entry
116238957 CDS
T07365
Symbol
TSEN2
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcoc03016
]
116238957 (TSEN2)
Enzymes [BR:
pcoc01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
116238957 (TSEN2)
Transfer RNA biogenesis [BR:
pcoc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
116238957 (TSEN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
116238957
NCBI-ProteinID:
XP_031464765
Ensembl:
ENSPCLG00000001297
UniProt:
A0A669PIR7
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MAEAAFRPPRRKRRVFECYQAPFPVGAGGGDFRMYRADMVNNSVVVRSPEDVEQLYSKGY
FGKGILSRSRPVYSISDPSLVSKWQGANLNMPIITSKKYQQRVQWAKSALKEQGFDSCSV
TKILENYTRPLEFPFLEKGGAEQTGDSCDTMGPNAENTELSRQSSINAGNIVTLSPEPQK
EVCQKACAEGDLASDVVIALGSEEKEPAVVKEAAQVSCQKHVSHVHHGCEAEGGPEQESC
NMAKSRECAPEYVLVQEEEDGSLCPEEGSAHEQENFVKKEKLVCRRNPFRIFEYLQLSLE
EAFFLVYALGCLTVYYGEEPLTILKLWEIFSEVKPSFKTTYMAYHYFRSKGWVPKVGLKY
GTDFLLYRKGPPFYHASYSVIAELVDDSFEGSLRRPLSWMSLSGLNRTTVNASKELMLCY
LIKPSDMTEEEMATPECLKRIKVQELIVTRWVSSRERSEQDDL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagccgctttccgtcccccgagaaggaaaagaagggtgtttgagtgctaccag
gcgcctttccctgtgggtgccggcgggggggatttcaggatgtaccgggctgacatggtc
aacaacagcgtcgtggtgcggagccccgaggacgtggagcagctgtacagcaagggctat
tttggaaaaggcattctttcaagaagtcgaccagtgtacagcatttctgatccttcactg
gtttccaaatggcaaggtgccaacctaaacatgcctataatcacatcgaaaaagtatcag
cagcgtgttcagtgggctaaaagtgccttgaaagagcaaggatttgatagctgctctgtg
accaaaattcttgagaattacactaggcctcttgaatttccatttttggaaaagggtgga
gctgagcaaactggtgatagctgcgacacaatgggtccaaacgcagaaaatacagaactt
tccaggcaatcttctataaacgctggaaacatagtgactttgagtcctgagcctcagaag
gaggtctgccagaaagcctgtgcagaaggagatctggcttctgatgtcgtgattgctctt
ggctcggaagaaaaggagcctgctgttgtgaaagaggcagcccaagtgtcctgccagaag
catgtttctcatgtgcatcatggctgtgaggctgaggggggccccgagcaagaatcgtgc
aacatggccaagtcaagagaatgtgctccagagtatgtgcttgtgcaagaggaagaagat
ggtagcttatgtcctgaagagggctctgctcacgagcaagaaaattttgtcaagaaggaa
aaactagtctgcagaagaaatccatttaggatttttgagtatttacaactcagcttggaa
gaggcttttttcttggtgtacgctctgggatgcttaactgtttattatggtgaggagccc
ttaactattttgaagctatgggaaattttcagcgaagtgaagcctagttttaaaactact
tacatggcgtatcattacttccgcagcaagggttgggtccccaaggttggactgaagtat
ggaactgatttcttgctgtatcgaaagggccctcccttctatcacgcaagttactctgtc
attgctgaattagttgatgacagttttgaaggttctcttcgcagaccgctgagctggatg
tccttgtctggtttgaacagaacaactgttaatgcttcgaaggaacttatgttatgctat
ttgattaaaccatctgatatgactgaagaagagatggccacgccagaatgtttgaaaaga
attaaggtccaggaactgattgtaactcgttgggtgtcttcccgtgagcgcagtgagcaa
gatgatctttaa
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