KEGG   Phasianus colchicus (Ring-necked pheasant): 116239465
Entry
116239465         CDS       T07365                                 
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
pcoc  Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pcoc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    116239465 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcoc03400]
    116239465 (APTX)
Enzymes [BR:pcoc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     116239465 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     116239465 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     116239465 (APTX)
DNA repair and recombination proteins [BR:pcoc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     116239465 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     116239465 (APTX)
SSDB
Motif
Pfam: DcpS_C zf-C2HE HIT zf-C2H2_4 zf-C2H2 zf-C2H2_6
Other DBs
NCBI-GeneID: 116239465
NCBI-ProteinID: XP_031465426
Ensembl: ENSPCLG00000013760
LinkDB
Position
Unknown
AA seq 302 aa
MSHRCRLMYLKIGVNPTSVDLVDIGKDEEVKMRPGQVLHFVNKLYPFTVQFGEESEETVT
EAEEKIQTEKRPCEDSYENDEIENVPRKAKKMEVVDTQSSSAGLRPSKSSVSPHEGTTSR
KEHLGHWSQGLKSAMQDPKVQVYKDEKTVVIKDKYPKARYHWLILPWDSISSLKSLTKEH
LRLLEHMHAVGQKMIQQCPAKESLEFRLGYHAIPSMSQLHLHVISQDFDSPALKTKKHWN
SFTTEYFLNSEDVIEMVRSKGKVTVNDQASELLKLPLRCHLCKQQLSTIPQLKEHLKKHW
TK
NT seq 909 nt   +upstreamnt  +downstreamnt
atgagccacaggtgcaggcttatgtatttgaagataggagtcaacccaactagtgttgac
ctagtggacattggcaaggatgaagaggtgaaaatgaggccaggccaagttctgcatttt
gtgaataaactttaccccttcacggtgcagtttggtgaagaatcagaggaaactgttaca
gaagcagaagagaaaatacagactgaaaagaggccatgtgaagactcctatgagaatgat
gaaatagaaaatgtgcccagaaaggcaaagaagatggaggtggtggatacacaaagcagt
tctgcaggcctcaggccaagcaagagcagtgtatctccacacgaagggacaacgagcaga
aaggaacatttaggacactggagtcaaggtctaaagagtgccatgcaagatccaaaagtg
caggtttacaaggacgagaagactgtagtcatcaaggataaatatcccaaagcacgttac
cactggcttattttaccgtgggactccatttcaagcctcaaatcactcaccaaagagcat
cttagactcctggaacatatgcatgcagttgggcaaaaaatgattcaacagtgccctgcc
aaagaaagcctggagttccggctgggttaccacgccattcccagtatgagtcagctgcat
ttgcacgtaatcagccaagattttgattctcctgctctgaaaaccaaaaagcactggaac
tcctttaccacagaatacttcctaaactccgaagatgtgatagagatggtacgaagcaag
ggaaaagtaacagtgaatgaccaggcctctgaacttctcaaattgcctctcagatgccat
ctgtgcaaacagcagctatccactatcccgcagctaaaggaacatctcaagaaacattgg
acaaaatga

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