Phasianus colchicus (Ring-necked pheasant): 116239466
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Entry
116239466 CDS
T07365
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03013
Nucleocytoplasmic transport
pcoc03015
mRNA surveillance pathway
pcoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116239466 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
116239466 (NCBP1)
03015 mRNA surveillance pathway
116239466 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116239466 (NCBP1)
03041 Spliceosome [BR:
pcoc03041
]
116239466 (NCBP1)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
116239466 (NCBP1)
Spliceosome [BR:
pcoc03041
]
Common components
Common spliceosomal components
Cap binding complex
116239466 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Motif
Other DBs
NCBI-GeneID:
116239466
NCBI-ProteinID:
XP_031465428
Ensembl:
ENSPCLG00000013724
UniProt:
A0A669QAL3
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MSRRRHSDDSDDSDGQPHKRRRTSEPSEIEERLESLICRVGEKSNSSLESNLEGLAGVLE
ADLPNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKV
NMYNEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYIFAFLSSLP
WVGKELYEKKDAEMDRLLSQTESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWSQIQK
LKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDP
EGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAE
LFQLPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFS
HHLSNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLSP
ANPVCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPNQDDDDDEGFT
FNPLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHP
QMIAVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEILHSTIRKMNKHVLKIHKE
LEDTKARLARQHKRRDSDDDDRSSDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRF
IMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTFENLLFTAELDHH
ILAVFQQFCALQA
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgatagcgatgacagcgatgggcagcctcacaagcgg
cggaggacgtcggagccgtcggagatcgaggagaggctcgagtcgctcatctgcagagta
ggggagaagagcaattcatccctggagagcaacttggagggcctagctggtgtattggaa
gctgatctaccaaattacaaaagcaagatactaagaattctgtgtactgttgcacgtctg
ttaccagaaaagcttactgtttacacaacactagttgggttgctgaatgccaggaactac
aactttggtggggaatttgtagaagccatgattcgtcagcttaaagaatgtctgaaagtc
aatatgtacaatgaagctgtgcatttagttcgttttctgtctgatcttgtgaattgtcat
gtcatagctgcaccttcgatggtagccatgtttgagaactttgtgagtgtgacacaggaa
gaagatgtaccacaagtacggtgtgactggtacatatttgcatttctgtcatctttgcct
tgggttggaaaggaattgtatgagaaaaaggatgctgagatggatcgtctcttatctcag
acagaaagctatctgaaacgccgccagaagatacatgtaccaatgttacaagtttggact
gctgataaaccacatccacaggaagaatatttagactgcctctggtctcagattcagaag
ttgaaaaaagaccgttggcaagaacgacacattctgaggccctacctggcttttgatagc
attctttgtgaagcactgcaacataatctgccgccattcactcctccacctcacactgaa
gactcagtatatcctatgccaagggttatttttaggatgtttgactacactgatgaccct
gagggccctgtcatgcctggcagccattctgttgaacgatttgtaatagaagagaacctt
cactgcatcatcaaatcccactggaaagagagaaagacttgtgctgcccagctcttgagc
tatccaggaaataacaagatacccttgaactatcacatagtagaggtaatttttgcagag
ttgtttcagcttccttctccgccacacatcgaggtcatgtacacaacactgctgattgaa
ctgtgcaaacttcagcctggttctttgccacaagttcttgcacaagccacagaaatgctc
tacatgcgtttggatacaatgaatacaacctgtgtagacagattcattaactggttttct
caccacctgagtaacttccagttccgttggagctgggaagattggtcagactgtcttact
caggaccttgaaaagcccaaacccaagtttgtgagagaggttttggaaaaatgcatgcga
ctctcctaccatcagcgaataatcgatattgttcctgcaagcttttctgtcctcagtcct
gcaaatccagtgtgtatctacaagtatggagatgaaagcaataggtctcttcctggatat
actgtggcactctgtttaacaattgcaattaaaaacaaggccagtaatgatgaaatcttc
agcattttaaaagatgtgcctaatccaaaccaggatgatgacgatgatgaaggatttact
ttcaatcctctgaaaatagaagtcttcgttcagactctgctccatcttgccgcaaagtct
ttcagccactccttcagcgccctggcaaagtttcatgaagtcttcaaaacgcttgctgaa
agtgatgagggaaaactccatgttttgagagttgtgtacgaggtctggaagaaccatcca
cagatgatcgctgtgcttgtggacaagatgattcggacacaaattgttgactgtgctgca
gtagcaaactggatcttctcctcagagcttgcacacgattttactaggttttacatctgg
gagatcttgcattccacaattcgtaagatgaataagcatgttctgaagattcacaaagaa
ctggaggatacaaaggcaaggttggccagacagcacaaaagacgagacagtgatgatgat
gaccggagcagtgatcgggaggatggacctctggaggagcagatagagcgcttgcaggag
aaggttgagtcagcacagagtgagcagaagaatctcttccttgttatattccagcgcttc
attatgttgttaactgagcacttagtgcgctgtgaaaccggtggaatcgatgtatttaca
ccttggtacaagagctgcatagaaaggctgcagcagatcttcctgcagcatcaccagata
atccagcagtatatggtgaccttcgagaacctcctgtttacagctgagctggatcatcac
atattggctgtctttcagcagttctgtgctctgcaggcctga
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integrated database retrieval system
