Phasianus colchicus (Ring-necked pheasant): 116239642
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Entry
116239642 CDS
T07365
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116239642 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcoc04040
]
116239642 (SCN8A)
Ion channels [BR:
pcoc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116239642 (SCN8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
IQ
FraC
Motif
Other DBs
NCBI-GeneID:
116239642
NCBI-ProteinID:
XP_031465643
Ensembl:
ENSPCLG00000014775
LinkDB
All DBs
Position
Unknown
AA seq
1978 aa
AA seq
DB search
MAARLLAPPGPDSFKPFTPESLANIEKRIAEEKKKKRPKQDSSHRDDDEDSKPKPNSDLE
AGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNRGKTLFRFSATPALYILSPFNL
FRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETFLDNGSRGF
DWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISK
LSSKSAKERRNRRKKRKDKELSEGEEKGDNEKVFKSESEDGMRRKAFRLPDNRIGRKFSI
MNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIP
IRGRDRRSSYSGYSGYSQGSRSSRIFPNLRRNIKRNSTVDCNGVVSLIGGPPSSMPGGRL
LPEGTTEIEIKKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPC
WYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFE
HVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLANVEGLSV
LRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYK
ECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMV
IGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWIKAKVREFMQAH
FKQREADEVKPLDELYDKKVNCIANHTGADIHRDIDYQKNGNGTTSGIGSSVEKYIIDED
HMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDDTSSSEGSTIDIKPE
VEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFET
FIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTN
AWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVG
AIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEERFEIDIVNNKTDCEALMPP
NSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYI
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQK
PIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINLVFV
IFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLA
RIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGI
DDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVG
IFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQF
IEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGEL
DILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRSRLARRGFISRRPLP
TKMENGGTNREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRRERAKRQKDVRESKC
NT seq
5937 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacggctgctcgcaccaccaggccctgatagttttaaacctttcactccggag
tctctggctaacattgagaaacgcattgcagaagaaaaaaagaagaagcgtccaaagcaa
gacagcagccatcgtgacgacgatgaagacagcaaaccaaaaccaaacagtgaccttgag
gcggggaagaatttgcctttcatctatggggacatccctaaaggcctggttgctgtacca
ctggaggactttgacccttattatatgacccagaaaacctttgtagtactaaacagaggg
aaaacactcttccgatttagtgccacacctgccttgtacattttaagtccttttaatctg
tttagaagaatagctattaaaattttgatacattcagtatttagcatgatcattatgtgc
actattttgaccaactgtgtattcatgacttttagtaacccacctgaatggtcgaagaat
gtggagtatacattcactggtatttatacatttgaatcacttgtgaaaattattgcaaga
ggtttctgtatagatggctttactttcctacgagacccatggaactggctagatttcagt
gtgatcatgatggcatatgtcacagagtttgtggacctggggaatgtctcagcattgaga
actttcagagttctccgagctttgaaaactatctctgtaattccaggcctgaagaccatt
gtgggtgccctgatccagtcggtgaagaagctgtcggatgtgatgatcctgacggtgttt
tgtctcagtgtctttgctctgattgggctgcagctgtttatgggcaatctgaggaacaag
tgtgtgatatggccaattaacgtgaacgagacgttcctggataacggctcccggggcttt
gactgggaggaatacaccaacaatatgtcaaatttttacataattcctggtgcccctgat
cctttgctctgtggtaacagctccgatgcaggtcaatgtccagagggttacacgtgcatg
aaagcaggacggaacccgaactacggttacacgagctttgacactttcagctgggctttc
ctggctctgtttcgccttatgactcaggatttttgggaaaacttgtatcaattaacctta
cgagcggcaggaaaaacctacatgatcttctttgtcctggtgatcttcgtgggctcgttc
tacctggtcaatctgattctggctgtggtggccatggcttacgaagagcagaaccaggcc
acgttggaggaggcagagcagaaagaggccgaatttaaggccatgttagaacaattgaaa
aagcagcaggaggaggcacaggctgctgccatggtcacttcggcagggacggtctctgag
gatgctgtggaagatgatggtggagggaggatgtctcggagctcatcggagatctctaaa
ctgagttccaagagtgccaaggagcgccgcaaccggaggaagaagcggaaggacaaagag
ctgtcagaaggagaggagaagggcgacaacgagaaagtgttcaagtcagaatcagaagat
ggcatgaggagaaaagccttcaggctgccagataacaggataggaagaaagttttccatc
atgaaccagtctctcctcagcatccccggctcccctttcctctcccgacacaacagcaag
agcagcatcttcagctacaagggccgattccgcgacccgggctcggagaacgaattcgcc
gacgacgaacacagcacggtggaggagagcgaaggccgcagggattccctcttcatcccc
atccgcggccgcgaccgacggagcagctacagcggctacagcggctacagccagggcagc
cgctcctcgcggattttccccaacctccgccgcaacatcaagaggaacagcacggtggat
tgcaacggcgtcgtgtccctcatcggcggcccgccttccagcatgcccggcgggcgcctt
ctgcctgagggtacgactgaaattgaaattaagaagaaacctggtgggtctctcttggtc
tcgatggatcaggtgaacgcctcctatggaaggaaggatcgtaccaacagcgtgatgact
ggcttgaccaacacccttgttgaagagctggaggagtcccagaggaagtgtcccccatgc
tggtacaaatttgccaacacattcttgatctgggaatgccacccctactggatcaagctg
aaggagatagtgaacttaatcgtcatggatccctttgttgacctggccatcaccatctgc
attgtgctcaacactctgttcatggccatggagcatcatcctatgaccccagagtttgaa
cacgtgctgtctgtaggaaacctggttttcacgggaattttcacagcagaaatgttcctg
aagctcatcgccatggatccctactattatttccaggaaggctggaacatctttgatgga
ttcatcgtctccctcagcttaatggagctgagtctggcgaatgtggaagggctttctgtg
ctgcgatctttccgattgctgagagtcttcaaactggccaagtcctggcccactctgaac
atgctgatcaaaatcatcggtaactcagtgggtgctttgggcaacttgaccttggtgttg
gccatcatcgtcttcatctttgcggtggtgggcatgcagctctttggcaaaagctacaag
gagtgtgtctgcaagatcaatccggagtgtgagctgccccgctggcacatgcacgatttc
ttccactccttccttattgtcttccgtgtgttgtgtggggaatggattgagaccatgtgg
gattgtatggaggtggcaggacaggccatgtgcttgattgtcttcatgatggtcatggtc
atcggaaatttagtggtgctgaacctcttcctggctttgctgctgagctccttcagcgca
gacaacctggcagcaacggatgacgatggggagatgaacaacctgcagatctctgtgatt
cgcatcaagaagggcattgcctggatcaaggcgaaagtgcgtgaattcatgcaggctcac
ttcaagcagagggaggcggatgaggtcaaacctttggacgagctgtatgacaagaaagtg
aactgcattgccaaccacacaggggccgatatccacagagacatcgattatcagaagaat
ggcaacggcacgaccagcggaatcgggagcagcgtggagaaatacatcattgatgaagac
cacatgtccttcatcaacaaccccaacctcaccgtccgggtgcctatcgctgtcggggaa
tcagattttgaaaacctcaacacagaagatttcagcagcgatacggatcctgatggcagc
aaagagaaactggatgataccagctcctccgaaggcagcaccattgatataaagcctgaa
gtggaagaagtccccgtggaggcaccagaagagtatctggacccggatgcgtgcttcacc
gagggttgcatgcagcgctgtaagtgttgtcaggtcaatattgaggaggggctggggaag
tcttggtggaccttgaggaagacgtgttttctgatcgtggagcataactggtttgagact
ttcatcatcttcatgatcctgctgagcagtggagctctggcttttgaggatatttacata
gagcagaggaaaaccatccggaccatcttggagtacgcagacaaggtcttcacgtacatc
ttcatcctggagatgttgctgaaatggtgtgcctatggattcgtcaagttcttcaccaac
gcctggtgctggctggatttcctcattgtggctgtctctttagtcagccttatagctaat
gccctgggctactcggaactaggtgccataaagtcccttaggaccctaagagctttgagg
cctttaagagcgttgtcccgatttgaggggatgagggtggttgtcaatgccttggttggc
gctatcccttccattatgaatgtcttgttggtctgccttatcttctggctgattttcagc
attatgggggttaacctgtttgctgggaaataccattactgctttaatgaaacatctgag
gagcgctttgaaatagacattgttaacaacaagacagactgtgaggcgctgatgccaccc
aactccactgagatccgatggaagaatgtgaaaatcaactttgacaacgttggggcagga
tacctggctcttctgcaagttgcaacattcaagggctggatggacatcatgtatgcagca
gtagattccagaaagcaagaagagcaacccaagtacgaggacaacatctacatgtacata
tattttgttatcttcatcatcttcggctcctttttcactctgaacttgttcatcggtgtc
atcattgacaacttcaatcaacaaaagaaaaagtttggaggtcaagatattttcatgaca
gaagaacaaaagaaatactacaacgccatgaaaaaactgggctccaagaagcctcaaaag
ccaattccccgacctctgaaccgcattcagggagctgtctttgacttcgtcactcagcaa
gcattcgacatcgtcatcatgatgctcatctgcctcaacatggtgaccatgatggtggag
acagacacacagagcaagcagatggaggacatcctctactggatcaacctggtgtttgtc
atcttcttcacctgcgagtgtgtgctgaagatgttcgccttgcggcactactacttcacc
attgggtggaacatctttgacttcgtggttgtgattctgtccattgtgggaatgttcctg
gctgaaatcatcgagaagtattttgtatcccccactctcttccgagtcatccgcctggct
cgtattggacgtatcctgcgtttgatcaaaggagccaaagggatccgcaccttgcttttt
gccttaatgatgtctttgcctgccttgttcaacatcggcctcttgctcttcctggtcatg
ttcatcttctccatcttcggcatgtccaacttcgcctacgtcaagcacgaggctggcatc
gacgacatgttcaactttgagacctttggcaacagcatgatctgcttgttccagatcacg
acgtcggctggctgggatggcctcctgctgcccatcctaaaccggcctccagactgcgac
ctggacaaggagcatcccgggagcggctttaagggggactgcgggaacccctcggtgggg
atatttttctttgtgagctacatcatcatctccttcctgatcgtggtcaacatgtacatt
gccatcatcctggagaacttcagcgtggcgacggaggagagcgcggacccgctgagcgag
gacgacttcgagaccttctatgagatctgggagaagttcgaccccgacgccacgcagttc
atagagtacagcaagctggcggactttgccgacgctttggaacatcctctgcgcgtccca
aagcccaacaccatcgaactcatcgccatggacctccctatggtaagtggagataggatc
cactgtttagacatcctgtttgccttcaccaaacgcgtcctgggggacagcggagagctg
gatatactgagacaacagatggaggaaaggtttgtggcttccaatccttccaaagtgtct
tacgagcccatcaccaccacgctgcggcgcaagcaggaggaggtctcggccgtggtgttg
cagagggcttacaggtcgcggttggcgaggcgggggttcatcagccgaagacccctcccc
accaaaatggagaacggaggaacaaacagggagaagaaggaagggacgccctccaccgcg
tcgctgccgtcctacgacagcgtcaccaaacccgagaaggagaagcagcagcgggcggag
gagggaagacgggaacgggcgaaaaggcaaaaagacgtcagggaatccaagtgttga
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integrated database retrieval system
