Phasianus colchicus (Ring-necked pheasant): 116239803
Help
Entry
116239803 CDS
T07365
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116239803 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoc03021
]
116239803 (SMARCC2)
03036 Chromosome and associated proteins [BR:
pcoc03036
]
116239803 (SMARCC2)
Transcription machinery [BR:
pcoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116239803 (SMARCC2)
Chromosome and associated proteins [BR:
pcoc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116239803 (SMARCC2)
PBAF complex
116239803 (SMARCC2)
GBAF(ncBAF) complex
116239803 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
116239803
NCBI-ProteinID:
XP_031465868
Ensembl:
ENSPCLG00000013715
LinkDB
All DBs
Position
Unknown
AA seq
1236 aa
AA seq
DB search
MAVRKKDGGPNVKYYEASDTVSQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLHQEIEPKLLSKLKDIIKRHQGTVTEDKSNASHVVCP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVSDEKSPVARRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYNKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEEENGTGSKGEQAKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQSDGDAKTGRKSKEIEDLVTESVKGKPELQQSSASQQMLNFPDKSKEK
PADMQNFGLRTDMYTKKNIPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTASEEP
ERIEESGAEETRAETAPVEEKKEVKEPRDSTAEEEVKEKVGDVAKKEEEKSKEPEGEKEA
EKGDSDSTGEWGPDGDVGGVSPYGCPPWTAQLPHTPGELEKEKEAKETQEETPKEPPEPE
AERKAKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIK
LRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQHLQQQQQQQP
PPLPPGAQPLPTAGTPLAPAAHPLAAPPTPAMVAPAEPGGQLMPGVPPPQPPPPPGAAQP
GPAIPHAPVPFPGQQPPSQSLGGNLGGSGHPSVPGNAPTALPFAPPPSAIPLSMANPLAD
SIATTFPANPPALPLHGALASSMPPGGLPPPPPHPPGLALPLLGGGSPAAHSPAIVAAVQ
GSLLPTPGLLADQGPPLQTDPIAPSPSTATPVPPTQ
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtcaagtactacgaggcctcggacacc
gtcagccagttcgacaacgtccgcctttggctcggcaagaactacaagaagtacatccag
gccgagccccccaccaacaagtcgctgtcgagcctggtggtgcagctgctgcagttccag
gaggaggtgttcgggaagcacgtcagcaacgcgccgctcaccaaactgccgatcaaatgc
ttcctggatttcaaggcggggggagccctgtgccacatcctggcggctgcttataagttc
aagagcgaccaaggatggcggcgtttcgatttccagaatccctcgcggatggaccgcaac
gtggagatgtttatgaccatcgagaaatccctggtgcagaacaactgcctgtcccggccc
aacatcttcctgcaccaggagattgagcccaagctgctgagcaaactgaaggacatcatc
aagaggcaccagggcacggtgactgaggacaagagcaacgcgtcccacgttgtctgcccc
gtccctgggaacttggaggaagaggagtgggtccggccggtcatgaagcgagacaagcag
gtcctgctgcactggggttactaccccgacagctacgacacctggatcccagccagtgag
attgaggcctctgtggaggacgccccgacgccagagaagccccggaaggtccacgccaag
tggatcctggacacggacaccttcaacgagtggatgaacgaggaggactacgaggtgtct
gatgagaagagccccgttgcccgcaggaagaagatctcagcaaagaccctgacagatgag
gtgaacagccctgactcggaccggcgggacaagaagggaggcaactacaagaagagaaag
cgctcaccctcaccttcacccactccagaggccaagaagaaaaacgcaaagaagggaccc
tccaccccctacaacaaatccaagcgtgggcaccgtgaggaggagcaggaggacctgacc
aaggacatggatgaaccctcacccgtccccaacgtggaggaggtcaccctgcccaaaaca
gtcaacaccaagaaggactcagagtctgcgcccgttaagggaggcaccatgacggacctg
gatgagcaggaggatgagagcatggagacagctggcaaggacgaggaggagaacggcacc
gggagcaaaggggagcaggccaagaaccccgacctgcacgaggacaacgtgacagagcag
acccaccacatcatcatccccagctacgccgcgtggttcgactacaacagcgtccacgcc
atcgagcgccgagccctgcctgagttcttcaacggcaagaacaaatccaaaacccccgag
atctacctggcgtaccgcaacttcatgatagacacgtaccgcctgaacccccaggagtac
ctcacctccaccgcctgccgccgcaacctggctggcgacgtctgcgccatcatgagggtg
cacgccttcctggagcaatggggcctcatcaactaccaggtggacgccgagagccggccc
acccccatgggccccccgcccacctcccatttccacgtgctggccgatacgccctccggt
ttggtgcctctgcagcccaagacgccgcagggccggcagagcgatggcgacgccaagacc
ggccgcaagagcaaagagatcgaagacctcgtcaccgagtcggtgaaagggaagccggag
ctgcagcagagctcggcctcgcagcagatgctgaacttccccgacaagagcaaggagaag
ccggccgacatgcagaacttcgggctgcgcaccgacatgtacaccaagaagaacatcccc
tccaagagcaaagctgctgccagcgcaacgagggaatggacggagcaggagacgctgctg
ctgctggaggctctggagatgtacaaggatgactggaacaaggtgtcggagcacgtgggc
agccgcacgcaggacgagtgcatcctgcatttcctgcgcctgcccatcgaggacccctac
ctggaggactcggaggcgtcgctggggccgctggcgtatcagcccatccccttcagccag
tctggtaaccctgtcatgagcaccgtcgccttcctggcctccgtcgttgacccccgtgtc
gcctctgctgctgctaaatcggcgctggaggagttctccaagatgaaggaggaggtgccc
acggcgttggtggaagctcacgtccgtaaggtggaggaggctgccaaggtgacgggcaaa
gccgaccccgcgttcgggctggagagcagcggcatcgccggcaccgcctcggaggagcca
gaacggatcgaggagagcggtgcggaggaaacacgcgcagagacggcgccggtggaggag
aaaaaggaggtgaaggagccgcgtgacagcactgctgaggaggaggtgaaggagaaagtg
ggggacgtggccaagaaggaggaggagaagagcaaagagcccgagggtgagaaggaggcg
gagaagggcgacagcgacagcacgggtgagtggggtccggatggggacgtggggggggtc
agcccctatggctgccccccatggaccgcccagctgccccacactccaggggagctggag
aaggagaaggaggcgaaggagacgcaggaggagactcctaaggagccaccggagcccgaa
gctgagcgcaaagccaaagtggagcgcgacatcggcgaagggaacctctccactgctgct
gctgctgcgctggcggccgctgctgtgaaggccaagcacctggcggccgtggaggagcgt
aagatcaaatctctggtggctctgctggtggagacgcagatgaagaaactggagatcaaa
ctgcggcacttcgaggagctggagaccatcatggaccgcgagcgggaggcgctggaatac
cagcggcagcagctgctggccgaccgccaggccttccatatggagcagctgaaatacgcc
gagatgcgcgcccgccagcagcacttccagcacctgcagcagcagcagcagcagcagccc
cccccgctgccccccggcgctcagcctctgcccaccgcaggaacccccctggcccccgcc
gcccacccgctggcagcgccgcccaccccagccatggtggcccccgctgagccggggggg
cagctgatgcctggggttccccccccgcagccccccccgccgccaggagcagcgcagccc
ggcccggccatcccgcacgccccggtgccgttccccgggcagcagccgccgtctcagagc
ctgggggggaacctgggtggcagcggccacccctccgtgcccggtaatgcgcccacggcg
ctgcccttcgctccgcctccatccgccatcccattgagcatggctaaccccctcgccgac
tccatcgccaccactttccccgctaacccgcccgccctcccgctgcatggggccctggcc
agcagcatgccgcccggggggctgccccccccccctcctcacccacccggcctggccttg
ccgttgctgggggggggctcgcccgccgcgcacagccccgccatcgtggccgccgtgcag
gggagcctccttcccacccctgggctgctcgcagatcaaggcccccccctgcagacggac
cccatcgctcccagccccagcacggccacccccgtcccccccacacagtga
DBGET
integrated database retrieval system
