Phasianus colchicus (Ring-necked pheasant): 116240134
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Entry
116240134 CDS
T07365
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116240134 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoc03021
]
116240134 (SMARCA2)
03036 Chromosome and associated proteins [BR:
pcoc03036
]
116240134 (SMARCA2)
Transcription machinery [BR:
pcoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116240134 (SMARCA2)
Chromosome and associated proteins [BR:
pcoc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
116240134 (SMARCA2)
Chromatin remodeling factors
BAF complex
116240134 (SMARCA2)
PBAF complex
116240134 (SMARCA2)
GBAF(ncBAF) complex
116240134 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
116240134
NCBI-ProteinID:
XP_031466315
Ensembl:
ENSPCLG00000015958
UniProt:
A0A669QDR0
LinkDB
All DBs
Position
Unknown
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHQMPAM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKTMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIPGDPQVMSQPNRGPSPFSPVQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGMHAMSGAATGP
GPAAGIPGHTAAITSKTWNEGQTPDMSVSSAPQKLPAPSLSGRPSPAPTAAQPAAAMPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDEEESSRLEADEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEDD
DDEEESESESKSVKVKIKLTKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagaccctggcgccatgcctcatcctggtccttcccctggaccggga
ccttcacctggaccgattctaggacctagcccaggaccagggccatctcctggctcagtt
cacagcatgatggggccaagccctggtccacccagtgtcccgcatcaaatgccagcaatg
gggcccactgattatccacaggaaggcatgcaccaaatgcataagtccattgatggctta
catgagaaaggaatggttgaagatgttcattgtggctccatgaagactatgcgacctcct
caccctgggatgggcccacctcagagtccaatggaccagcatagccaaggttatatgtct
ccacacccgtctccactaggagcaccagaacatgtatccagtccgatgtctggaggaggt
ccaactccaccccagatgactcccagccagccaggacctattatacctggggacccgcaa
gttatgagtcaacccaacagaggtccttcccctttcagccctgtacagctgcaccagctt
cgggctcagattctagcatacaaaatgttagctaggggtcagcctttgccagaaaacctc
cagcttgctgttcagggaaagcggacccttcctggcattcaacaacagcagcctcccagt
gccttcaacagacagtctggtattgggatgcatgcaatgagtggtgctgcaactggaccg
gggccagctgcaggaatacctgggcatacagctgccattacttctaaaacttggaatgaa
ggccaaaccccagatatgagtgtctccagtgcaccacagaaacttccagcaccatctctg
agtgggaggccttctcctgcccctactgctgcccagcctgctgctgctatgcctgggcct
tctgtaccacagccaccacctggacagccttcccccattgttcagctgcaacaaaagcag
aatcgcatcagccctattcaaaagccacaaggattagaccctgttgaaattcttcaagaa
agggaatataggcttcaagcacgaattgctcacagaatccaggaactggaaaacttgcca
ggttctctgccccctgatctgcgaaccaaagcaacagtggagttgaaggcacttcgctta
ctgaacttccagcgccagttgagacaagaggtggtagcctgcatgcgtcgtgatacaaca
ctggagacggcactgaactccaaggcctataaacgaagcaagcggcagactttgagggag
gcccgtatgactgaaaagcttgagaaacagcagaagatagagcaggagaggaagcgtaga
cagaagcatcaggaatacctgaatagcatattgcaacatgctaaagacttcaaggaatac
catcggtcagtggctggcaaaattcagaaactttctaaagctgtggctacttggcatgcc
aacactgaacgtgagcagaagaaagaaactgagagaattgagaaagaaagaatgaggaga
ctaatggctgaagatgaagagggctaccgtaagctgattgaccaaaagaaagatagacgc
ctggcctacctattgcagcagacagatgagtatgttgctaacttgactaatctggtatgg
gaacataaacaggcacaagcagccaaagagaagaagaagaggaggagaagaaagaagaag
gctgaagaaaatgcagaaggcatggcatctggtcttggtcctgatggagagcccatagat
gagagcagccagatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagtt
cttcttggtccagaggcaccaaaagcaagtcagctagatgcttggctggaaatgaaccct
ggctatgaagttgctcccaggtcagacagtgaagatgaaagtggttctgaatatgaggag
gaggatgatgaagaagaatcaagcaggttagaagcagatgagaagatactcctggatcct
aacagtgaagaagtttctgagaaagatgctaagcaaatcattgagacagccaaacaagat
gtggatgatgaatacagtatgcaatatagtgctagggggtctcagtcctactacacagtt
gcacatgcaatcacagaaagggtggaaaagcagtcttctcttctaattaatggcacacta
aaacattatcagcttcagggactggaatggatggtttcactctacaataacaatctgaat
gggattttagctgatgaaatgggtctgggaaagacaatacagactattgcacttatcact
tatttgatggaacacaaaaggctcaatggcccctatttgatcattgttcccctttcgacg
ttatccaactggacatacgaatttgacaagtgggctccttctgtggtgaagatatcttac
aagggtacacctgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaat
gttcttttgactacatatgagtacataataaaggacaaacatattcttgctaagattcga
tggaaatacatgatagtagatgaaggtcatcgaatgaagaatcatcactgcaaactgacg
caggtcttgaacactcactatgtggccccaaggcgaatactactgactgggacaccattg
cagaataaattgcctgaactgtgggctctcctcaattttcttcttccaaccattttcaag
agctgtagcacctttgaacagtggttcaacgctccatttgccatgacaggagaaagggtg
gacttaaatgaagaagaaactattctgatcattcgtcgtctccacaaagtactccgaccc
ttcttgctgagaagactgaagaaggaagtagagtctcaacttccagaaaaggtggaatat
gtgatcaaatgtgatatgtctgctctccagaagatcctatatcgacacatgcaagccaag
ggaatccttcttacagatggttctgagaaagacaagaagggaaaaggtggcgcaaaaact
cttatgaacaccatcatgcaactgagaaagatatgcaatcatccatatatgtttcagcac
attgaggaatcctttgctgaacatttaggctactcaaatggtgtcatcaacggagctgag
ctttatcgggcctcggggaagtttgagctacttgatcgcattctaccaaagttacgagct
acaaaccatcgtgtgcttcttttctgtcaaatgacatcactcatgaccattatggaagac
tactttgcctttcgaaatttcctctacttgcgtcttgatggcacaacaaaatcagaagat
agagctgctctcttgaagaagttcaatgagcctgggtcacaatactttatcttcttgctg
agtacaagggctggagggctaggcttgaatctccaggctgctgatactgttataatcttt
gatagtgactggaatcctcaccaggacttgcaggcacaagatagagctcaccgaattggg
cagcagaatgaagttcgagttttgcgactatgcactgtgaacagtgtggaagagaagatt
cttgctgctgcaaagtataagttgaatgtagatcaaaaagttattcaggctggaatgttt
gatcagaagtcttcgagtcatgaaaggagggcttttctacaggctatactggagcatgag
gaagaaaatgaggaggaagatgaagttcctgatgatgagactctgaatcagatgattgct
cgacgtgaggaggaatttgatctctttatgcgtatggacatggaccgtcgtagagaagat
gccagaaaccctaagcgcaagccccgcttgatggaggaggatgaattgccatcctggatt
attaaggatgatgctgaagttgaaaggctcacatgtgaagaagaggaggaaaagatattt
ggaagaggatcccgtcaacgcagggatgtggactacagtgatgctctcacagagaagcag
tggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaagtccggcttaaa
aagcggaagagacgaagaaatgtggataaggattctgggaaggaggatggagagaaagca
aagaaaagaagaggcagacctcctgcagagaaattatcacctaacccacccaaactgaca
aaacaaatgaatgccatcattgatacagtgataaactacaaagacagttctggacgacag
ctaagtgaagtcttcattcagctcccatcaagaaaagaactaccagaatattatgaattg
attaggaaaccagtggatttcaaaaaaattaaggaaagaattcgcaaccataaatatcgg
agtcttggggatttggagaaggatgtcatgttgctgtgtcataatgctcagacattcaat
ctggagggatcacagatctatgaggattccattgttcttcagtccgtgttcaaaagtgca
cgacagaagattgccaaagaagaagaaagtgaggatgaaagcaatgatgatgaagatgat
gatgatgaagaggagtcagagtcggaatcaaaatctgtgaaagtcaaaatcaagctgact
aaaaaggatgaaaaaagtcgggagaaaggaaagggcaagaagaggcagagccgagcaaaa
gccaaacctgttgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
