KEGG   Phasianus colchicus (Ring-necked pheasant): 116240197
Entry
116240197         CDS       T07365                                 
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
pcoc  Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03018  RNA degradation
pcoc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116240197 (LSM7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    116240197 (LSM7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcoc03019]
    116240197 (LSM7)
   03041 Spliceosome [BR:pcoc03041]
    116240197 (LSM7)
Messenger RNA biogenesis [BR:pcoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     116240197 (LSM7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     116240197 (LSM7)
Spliceosome [BR:pcoc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    116240197 (LSM7)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 116240197
NCBI-ProteinID: XP_031466398
Ensembl: ENSPCLG00000013331
UniProt: A0A669Q687
LinkDB
Position
Unknown
AA seq 116 aa
MANVGGGGGGAGKMADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLV
LDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq 351 nt   +upstreamnt  +downstreamnt
atggcgaacgtcggagggggcggtggtggtgcgggcaagatggcggataaggagaaaaag
aaaaaagagagcattttagatctctccaaatatatcgacaaaacgatccgggtgaagttc
cagggtggaagagaagcaagtggtgtcttgaaaggatttgaccccctactgaaccttgtg
cttgatggtaccattgaatatatgcgagacccagatgatcaatacaaattaacagaagac
acgcgtcagctgggactggtggtctgcagagggacttctgtggttctcatttgcccacag
gatggaatggaagcgattccaaatcctttcattcagcaacaagatggataa

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